HO062941

EST Overview
NameHO062941
Unique NameHO062941
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length490
Libraries
Library NameType
LIBEST_026409 Chickpea drought stressed cDNA SSH library AB2cdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Homology
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BLAST of HO062941 vs. TrEMBL
Match: B7FMR2_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 9.042e-10
Identity = 49/132 (37.12%), Postives = 71/132 (53.79%), Query Frame = -1 
Query:   95 WFKTLLSLFKFVVWPLSAXIRTKIGKPEKRAKKVXEKGWELWRIMVER----RK*IXEXDHINIVDIA*GXIYKFL*FGNXI*R-EICKXEVXP-FXFXXNNFKEVQVIKENTPHQKNLXAFLMPLLEKMLA 472
            W K +  L   +V    A + +K+G+  ++A+   E  WE  R++ ++    RK     D INIVDIA G   KF+     + + +I + E  P      NNFK+  VIKENTP Q+ L AFL PL+EK+ A
Sbjct:   96 WVKYVDELISVIV----AFLHSKVGEEREKAR---ENLWERLRVIEDQCLDDRKTFYGGDTINIVDIALGSFIKFIEVQEDMFKVKILQSERFPRLHLWFNNFKDAPVIKENTPDQEKLVAFLNPLIEKIKA 220
[Close]
BLAST of HO062941 vs. TrEMBL
Match: Q1RSI2_MEDTR (Intracellular chloride channel OS=Medicago truncatula GN=MtrDRAFT_AC161864g25v2 PE=4 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 1.542e-9
Identity = 45/117 (38.46%), Postives = 67/117 (57.26%), Query Frame = -1 
Query:   95 LSAXIRTKIGKPEKRAKKVXEKGWELWRIMVER----RK*IXEXDHINIVDIA*GXIYKFL*FGNXI*R-EICKXEVXP-FXFXXNNFKEVQVIKENTPHQKNLXAFLMPLLEKMLA 427
            ++A + +K+G+  ++A+   E  WE  R++ ++    RK     D INIVDIA G   KF+     + + +I + E  P      NNFK+  VIKENTP Q+ L AFL PL+EK+ A
Sbjct:  107 IAAFLHSKVGEEREKAR---ENLWERLRVIEDQCLDDRKTFYGGDTINIVDIALGSFIKFIEVQEDMFKVKILQSERFPRLHLWFNNFKDAPVIKENTPDQEKLVAFLNPLIEKIKA 220
The following BLAST results are available for this feature:
BLAST of HO062941 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 2
Match NameE-valueIdentityDescription
B7FMR2_MEDTR9.042e-1037.12Putative uncharacterized protein OS=Medicago trunc... [more]
Q1RSI2_MEDTR1.542e-938.46Intracellular chloride channel OS=Medicago truncat... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 9..16
score

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>HO062941 ID=HO062941; Name=HO062941; organism=Cicer arietinum; type=EST; length=490bp
AGTGAAGTACAAAAACATAAAGCAACTACTATATAGCATAAAAAAATACA
CATGACTCATGAAGAAACAAATGCTTATATATTATTCAGGAAAATGCCAA
CATTTTTTCTAAAAGAGGCATCAAAAAAGCGNCCAAATTCTTTTGGTGAG
GGGTATTTTCTTTGATGACTTGGACCTCCTTGAAATTATTAANNCTAAAT
NGAAATGGGGNAACCTCTANTTTGCAAATTTCCCTTCAAATGTNGTTTCC
AAACTATAAAAATTTGTAAATANATCCCTAGGCTATGTCTACAATGTTAA
TGTGGTCTCNTTCNCAAATTTATTTTCGCCTTTCAACCATTATCCTCCAC
AACTCCCAGCCCTTTTCTNAAACTTTCTTTGCCCTCTTTTCGGGCTTCCC
TATTTTTGTTCGAATGANTGCTGAAAGTGGCCAAACCACAAATTTGAACA
AGGATAAAAGTGTTTTGAACCACAAAGGCAACGGGTTAAG
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