HO063968
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of HO063968 vs. SwissProt
Match: VPS35_MOUSE (Vacuolar protein sorting-associated protein 35 OS=Mus musculus GN=Vps35 PE=1 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 8.024e-14 Identity = 52/140 (37.14%), Postives = 76/140 (54.29%), Query Frame = 2 Query: 8 TIIKNTKSLSQLSSNIGHDVXQKQDNLGAXNLGQYSAKLLKEPDQXRAVYACSHLFXVD---DQDG--IKDGXRVLLCLKRALRIANAAQQMANVXRGSSGPVALFVEILNKYIYYFEKGDPQITGATIQGLIELIKTEM 412 T+I T + S H+ + Q L A +KLLK+PDQ RAV C+HLF D++G + G RV+ CLK+AL+IAN S V LF+EILN+YIY++EK + +T + LI+ I+ ++ Sbjct: 629 TLIIGTFERMKCFSEENHEPLRTQCALAA-------SKLLKKPDQGRAVSTCAHLFWSGRNTDKNGEELHGGKRVMECLKKALKIANQCMD-------PSLQVQLFIEILNRYIYFYEKENDAVTIQVLNQLIQKIREDL 754
BLAST of HO063968 vs. SwissProt
Match: VPS35_HUMAN (Vacuolar protein sorting-associated protein 35 OS=Homo sapiens GN=VPS35 PE=1 SV=2) HSP 1 Score: 76.2554 bits (186), Expect = 8.024e-14 Identity = 52/140 (37.14%), Postives = 76/140 (54.29%), Query Frame = 2 Query: 8 TIIKNTKSLSQLSSNIGHDVXQKQDNLGAXNLGQYSAKLLKEPDQXRAVYACSHLFXVD---DQDG--IKDGXRVLLCLKRALRIANAAQQMANVXRGSSGPVALFVEILNKYIYYFEKGDPQITGATIQGLIELIKTEM 412 T+I T + S H+ + Q L A +KLLK+PDQ RAV C+HLF D++G + G RV+ CLK+AL+IAN S V LF+EILN+YIY++EK + +T + LI+ I+ ++ Sbjct: 629 TLIIGTFERMKCFSEENHEPLRTQCALAA-------SKLLKKPDQGRAVSTCAHLFWSGRNTDKNGEELHGGKRVMECLKKALKIANQCMD-------PSLQVQLFIEILNRYIYFYEKENDAVTIQVLNQLIQKIREDL 754
BLAST of HO063968 vs. SwissProt
Match: VPS35_BOVIN (Vacuolar protein sorting-associated protein 35 OS=Bos taurus GN=VPS35 PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 8.024e-14 Identity = 52/140 (37.14%), Postives = 76/140 (54.29%), Query Frame = 2 Query: 8 TIIKNTKSLSQLSSNIGHDVXQKQDNLGAXNLGQYSAKLLKEPDQXRAVYACSHLFXVD---DQDG--IKDGXRVLLCLKRALRIANAAQQMANVXRGSSGPVALFVEILNKYIYYFEKGDPQITGATIQGLIELIKTEM 412 T+I T + S H+ + Q L A +KLLK+PDQ RAV C+HLF D++G + G RV+ CLK+AL+IAN S V LF+EILN+YIY++EK + +T + LI+ I+ ++ Sbjct: 629 TLIIGTFERMKCFSEENHEPLRTQCALAA-------SKLLKKPDQGRAVSTCAHLFWSGRNTDKNGEELHGGKRVMECLKKALKIANQCMD-------PSLQVQLFIEILNRYIYFYEKENDAVTIQVLNQLIQKIREDL 754
BLAST of HO063968 vs. SwissProt
Match: VPS35_YEAST (Vacuolar protein sorting-associated protein 35 OS=Saccharomyces cerevisiae GN=VPS35 PE=1 SV=2) HSP 1 Score: 75.485 bits (184), Expect = 1.369e-13 Identity = 48/115 (41.74%), Postives = 68/115 (59.13%), Query Frame = 2 Query: 110 YSAKLLKEPDQXRAVYACSHLF------XVDDQDGI-----KDGXRVLLCLKRALRIANAAQQMANVXRGSSGPVALFVEILNKYIYYFEKGDPQITGATIQ---GLIELIKTEM 412 + +KLLK+ DQ RAVY CSHL+ + +++GI +DG RVL CL+R+LR+A++ + L VEILN+ +YYF GD T +I+ GLIELIKT + Sbjct: 723 HGSKLLKKQDQCRAVYLCSHLWWATEISNIGEEEGITDNFYRDGKRVLECLQRSLRVADSIMD-------NEQSCELMVEILNRCLYYFIHGDESETHISIKYINGLIELIKTNL 830
BLAST of HO063968 vs. SwissProt
Match: VPS35_SCHPO (Vacuolar protein sorting-associated protein 35 OS=Schizosaccharomyces pombe GN=vps35 PE=1 SV=1) HSP 1 Score: 64.6994 bits (156), Expect = 2.416e-10 Identity = 37/105 (35.24%), Postives = 57/105 (54.29%), Query Frame = 2 Query: 110 YSAKLLKEPDQXRAVYACSHLFXV----DDQDGIKDGXRVLLCLKRALRIANAAQQMANVXRGSSGPVALFVEILNKYIYYFEKGDPQITGATIQGLIELIKTEM 412 Y++KLLK+PDQ +Y SHL+ +D +D RVL CL+++L+IA+A + LF+ IL +Y YY+++ I I GLI+L + M Sbjct: 628 YASKLLKKPDQCCGIYLASHLWWQVASGEDSRPFQDPKRVLECLQKSLKIADACMDQLTSLK-------LFINILERYFYYYDQHCESIIAKHISGLIDLTEQNM 725
BLAST of HO063968 vs. TrEMBL
Match: B9GQS3_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_754002 PE=4 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 7.542e-41 Identity = 84/101 (83.17%), Postives = 90/101 (89.11%), Query Frame = 2 Query: 110 YSAKLLKEPDQXRAVYACSHLFXVDDQDGIKDGXRVLLCLKRALRIANAAQQMANVXRGSSGPVALFVEILNKYIYYFEKGDPQITGATIQGLIELIKTEM 412 +SAKLLK+PDQ RAVYACSHLF VDDQDGIKDG RVLLCLKRALRIANAAQQ+AN RG SGPV LFVEILNKY+Y+FEKG+PQIT A IQGLIELI EM Sbjct: 648 HSAKLLKKPDQCRAVYACSHLFWVDDQDGIKDGERVLLCLKRALRIANAAQQIANATRGCSGPVTLFVEILNKYLYFFEKGNPQITSAAIQGLIELITNEM 748
BLAST of HO063968 vs. TrEMBL
Match: B9R8C3_RICCO (Vacuolar sorting protein, putative OS=Ricinus communis GN=RCOM_1598610 PE=4 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 9.851e-41 Identity = 83/101 (82.18%), Postives = 90/101 (89.11%), Query Frame = 2 Query: 110 YSAKLLKEPDQXRAVYACSHLFXVDDQDGIKDGXRVLLCLKRALRIANAAQQMANVXRGSSGPVALFVEILNKYIYYFEKGDPQITGATIQGLIELIKTEM 412 YSAKLLK+PDQ RAVYACSHLF +DDQ GIKDG RVLLCL+RALRIANAAQQMANV RGSSGPV LFVEILNKY+Y+FEKG+PQ+T IQ LIELI TEM Sbjct: 634 YSAKLLKKPDQCRAVYACSHLFWMDDQGGIKDGERVLLCLRRALRIANAAQQMANVARGSSGPVILFVEILNKYLYFFEKGNPQVTSGAIQSLIELINTEM 734
BLAST of HO063968 vs. TrEMBL
Match: B9H504_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_801569 PE=4 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 1.089e-39 Identity = 80/101 (79.21%), Postives = 90/101 (89.11%), Query Frame = 2 Query: 110 YSAKLLKEPDQXRAVYACSHLFXVDDQDGIKDGXRVLLCLKRALRIANAAQQMANVXRGSSGPVALFVEILNKYIYYFEKGDPQITGATIQGLIELIKTEM 412 +SAKLLK+PDQ RAVYACSHLF VD++DGIKDG RVLLCLKRALRIANAAQQMAN G+SGPV LFVEILNKY+Y+FEKG+PQ+T A IQGL+ELI EM Sbjct: 649 HSAKLLKKPDQCRAVYACSHLFWVDEKDGIKDGERVLLCLKRALRIANAAQQMANAVSGTSGPVTLFVEILNKYLYFFEKGNPQVTSAAIQGLVELIANEM 749
BLAST of HO063968 vs. TrEMBL
Match: Q84SZ6_ORYSJ (Os03g0801600 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0087C10.23 PE=2 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 1.422e-39 Identity = 85/113 (75.22%), Postives = 93/113 (82.30%), Query Frame = 2 Query: 71 QKQDNLGAXNLGQYSAKLLKEPDQXRAVYACSHLFXVDDQDGIKDGXRVLLCLKRALRIANAAQQMANVXRGSSGPVALFVEILNKYIYYFEKGDPQITGATIQGLIELIKTE 409 + +D L G YSAKLLK+PDQ RAVYACSHLF DDQDGI DG RVLLCLKRALRIANAAQQMANV RGSSG VALF+EILNKY+Y+FEKG P+IT IQ LIELI+TE Sbjct: 639 ENRDTLTHKTTG-YSAKLLKKPDQCRAVYACSHLFWTDDQDGIMDGERVLLCLKRALRIANAAQQMANVTRGSSGSVALFIEILNKYLYFFEKGIPEITNTVIQDLIELIRTE 750
BLAST of HO063968 vs. TrEMBL
Match: A2XN04_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_13933 PE=4 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 1.422e-39 Identity = 85/113 (75.22%), Postives = 93/113 (82.30%), Query Frame = 2 Query: 71 QKQDNLGAXNLGQYSAKLLKEPDQXRAVYACSHLFXVDDQDGIKDGXRVLLCLKRALRIANAAQQMANVXRGSSGPVALFVEILNKYIYYFEKGDPQITGATIQGLIELIKTE 409 + +D L G YSAKLLK+PDQ RAVYACSHLF DDQDGI DG RVLLCLKRALRIANAAQQMANV RGSSG VALF+EILNKY+Y+FEKG P+IT IQ LIELI+TE Sbjct: 639 ENRDTLTHKTTG-YSAKLLKKPDQCRAVYACSHLFWTDDQDGIMDGERVLLCLKRALRIANAAQQMANVTRGSSGSVALFIEILNKYLYFFEKGIPEITNTVIQDLIELIRTE 750
BLAST of HO063968 vs. TrEMBL
Match: D7SNV2_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_23.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00018728001 PE=4 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 1.858e-39 Identity = 83/101 (82.18%), Postives = 89/101 (88.12%), Query Frame = 2 Query: 110 YSAKLLKEPDQXRAVYACSHLFXVDDQDGIKDGXRVLLCLKRALRIANAAQQMANVXRGSSGPVALFVEILNKYIYYFEKGDPQITGATIQGLIELIKTEM 412 YSAKLLK+PDQ RAVYACSHLF VDDQD I+DG RVLLCLKRALRIANAAQQMANV RGSSG LFVEILNKY+Y+FEKG+PQIT A IQ LIELI TE+ Sbjct: 648 YSAKLLKKPDQCRAVYACSHLFWVDDQDSIRDGERVLLCLKRALRIANAAQQMANVTRGSSGSATLFVEILNKYLYFFEKGNPQITIAAIQSLIELITTEI 748
BLAST of HO063968 vs. TrEMBL
Match: A5AFS2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_041912 PE=4 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 1.858e-39 Identity = 83/101 (82.18%), Postives = 89/101 (88.12%), Query Frame = 2 Query: 110 YSAKLLKEPDQXRAVYACSHLFXVDDQDGIKDGXRVLLCLKRALRIANAAQQMANVXRGSSGPVALFVEILNKYIYYFEKGDPQITGATIQGLIELIKTEM 412 YSAKLLK+PDQ RAVYACSHLF VDDQD I+DG RVLLCLKRALRIANAAQQMANV RGSSG LFVEILNKY+Y+FEKG+PQIT A IQ LIELI TE+ Sbjct: 634 YSAKLLKKPDQCRAVYACSHLFWVDDQDSIRDGERVLLCLKRALRIANAAQQMANVTRGSSGSATLFVEILNKYLYFFEKGNPQITIAAIQSLIELITTEI 734
BLAST of HO063968 vs. TrEMBL
Match: Q9LQS9_ARATH (T4O12.9 OS=Arabidopsis thaliana PE=4 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 7.060e-39 Identity = 81/101 (80.20%), Postives = 88/101 (87.13%), Query Frame = 2 Query: 110 YSAKLLKEPDQXRAVYACSHLFXVDDQDGIKDGXRVLLCLKRALRIANAAQQMANVXRGSSGPVALFVEILNKYIYYFEKGDPQITGATIQGLIELIKTEM 412 YSA+LLK+PDQ RAVYACSHLF VDD DGIKDG RVLLCL+RALRIANAAQQMA+ RGSSGPV LFVEILNKYIY+FEKG+P IT + IQ LIELI EM Sbjct: 743 YSARLLKKPDQCRAVYACSHLFWVDDPDGIKDGERVLLCLRRALRIANAAQQMASATRGSSGPVTLFVEILNKYIYFFEKGNPHITPSDIQSLIELINNEM 843
BLAST of HO063968 vs. TrEMBL
Match: Q0WRZ0_ARATH (Putative vacuolar sorting protein 35 OS=Arabidopsis thaliana GN=At1g75850 PE=2 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 7.060e-39 Identity = 81/101 (80.20%), Postives = 88/101 (87.13%), Query Frame = 2 Query: 110 YSAKLLKEPDQXRAVYACSHLFXVDDQDGIKDGXRVLLCLKRALRIANAAQQMANVXRGSSGPVALFVEILNKYIYYFEKGDPQITGATIQGLIELIKTEM 412 YSA+LLK+PDQ RAVYACSHLF VDD DGIKDG RVLLCL+RALRIANAAQQMA+ RGSSGPV LFVEILNKYIY+FEKG+P IT + IQ LIELI EM Sbjct: 649 YSARLLKKPDQCRAVYACSHLFWVDDPDGIKDGERVLLCLRRALRIANAAQQMASATRGSSGPVTLFVEILNKYIYFFEKGNPHITPSDIQSLIELINNEM 749
BLAST of HO063968 vs. TrEMBL
Match: D7KT77_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_895460 PE=4 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 7.060e-39 Identity = 81/101 (80.20%), Postives = 88/101 (87.13%), Query Frame = 2 Query: 110 YSAKLLKEPDQXRAVYACSHLFXVDDQDGIKDGXRVLLCLKRALRIANAAQQMANVXRGSSGPVALFVEILNKYIYYFEKGDPQITGATIQGLIELIKTEM 412 YSA+LLK+PDQ RAVYACSHLF VDD DGIKDG RVLLCL+RALRIANAAQQMA+ RGSSGPV LFVEILNKYIY+FEKG+P IT + IQ LIELI EM Sbjct: 650 YSARLLKKPDQCRAVYACSHLFWVDDPDGIKDGERVLLCLRRALRIANAAQQMASATRGSSGPVTLFVEILNKYIYFFEKGNPHITPSDIQSLIELINNEM 750
BLAST of HO063968 vs. TAIR peptide
Match: AT1G75850.1 (| Symbols: VPS35B | VPS35 homolog B | chr1:28478053-28483874 REVERSE LENGTH=790) HSP 1 Score: 163.31 bits (412), Expect = 5.678e-41 Identity = 81/101 (80.20%), Postives = 88/101 (87.13%), Query Frame = 2 Query: 110 YSAKLLKEPDQXRAVYACSHLFXVDDQDGIKDGXRVLLCLKRALRIANAAQQMANVXRGSSGPVALFVEILNKYIYYFEKGDPQITGATIQGLIELIKTEM 412 YSA+LLK+PDQ RAVYACSHLF VDD DGIKDG RVLLCL+RALRIANAAQQMA+ RGSSGPV LFVEILNKYIY+FEKG+P IT + IQ LIELI EM Sbjct: 649 YSARLLKKPDQCRAVYACSHLFWVDDPDGIKDGERVLLCLRRALRIANAAQQMASATRGSSGPVTLFVEILNKYIYFFEKGNPHITPSDIQSLIELINNEM 749
BLAST of HO063968 vs. TAIR peptide
Match: AT2G17790.1 (| Symbols: VPS35A, ZIP3 | VPS35 homolog A | chr2:7733685-7739344 FORWARD LENGTH=787) HSP 1 Score: 144.821 bits (364), Expect = 2.090e-35 Identity = 68/100 (68.00%), Postives = 87/100 (87.00%), Query Frame = 2 Query: 110 YSAKLLKEPDQXRAVYACSHLFXVDDQDGIKDGXRVLLCLKRALRIANAAQQMANVXRGSSGPVALFVEILNKYIYYFEKGDPQITGATIQGLIELIKTE 409 Y+AKLLK+PDQ RAVYACSHLF ++D++ I+DG RVLLCLKRAL+IAN+AQQ+AN RGS+G V LF+EILNKY+Y++EKG PQIT +++ LI+LIK E Sbjct: 649 YAAKLLKKPDQCRAVYACSHLFWLEDRETIQDGERVLLCLKRALKIANSAQQVANTARGSTGSVTLFIEILNKYLYFYEKGVPQITVESVESLIKLIKNE 748
BLAST of HO063968 vs. TAIR peptide
Match: AT3G51310.1 (| Symbols: VPS35C | VPS35 homolog C | chr3:19044634-19049321 REVERSE LENGTH=790) HSP 1 Score: 132.494 bits (332), Expect = 1.073e-31 Identity = 64/102 (62.75%), Postives = 83/102 (81.37%), Query Frame = 2 Query: 110 YSAKLLKEPDQXRAVYACSHLFXVDDQDGIKDGXRVLLCLKRALRIANAAQQMANVXRG--SSGPVALFVEILNKYIYYFEKGDPQITGATIQGLIELIKTE 409 YSA+LL++PDQ RAVY C+HLF D+ + +KDG RV+LCLKRA RIA+A QQMAN RG S+G V+L+VE+LNKY+Y+ EKG+ Q+TG TI+ L ELIK+E Sbjct: 646 YSARLLRKPDQCRAVYECAHLFWADECENLKDGERVVLCLKRAQRIADAVQQMANASRGTSSTGSVSLYVELLNKYLYFLEKGNQQVTGDTIKSLAELIKSE 747 The following BLAST results are available for this feature:
BLAST of HO063968 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot) Total hits: 5
BLAST of HO063968 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl) Total hits: 10
BLAST of HO063968 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide) Total hits: 3
InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >HO063968 ID=HO063968; Name=HO063968; organism=Cicer arietinum; type=EST; length=477bpback to top Annotated Terms
The
following terms have been associated with
this EST:
|