HO066686

EST Overview


Name	HO066686
Unique Name	HO066686
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	850

Libraries


Library Name	Type
LIBEST_026413 Chickpea drought stressed cDNA SSH library AS2	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 4..21 score: NAcoord: 47..53 score: NAcoord: 65..75 score: NAcoord: 86..96 score: NAcoord: 111..117 score: NAcoord: 128..140 score: NAcoord: 142..153 score: NAcoord: 154..162 score: NAcoord: 167..177 score: NAcoord: 179..188 score: NAcoord: 198..206 score
None	No IPR available	SEG	seg	seg	coord: 2..12 score: NAcoord: 20..38 score: NAcoord: 43..49 score
None	No IPR available	SEG	seg	seg	coord: 5..9 score: NAcoord: 21..32 score: NAcoord: 46..57 score: NAcoord: 67..77 score: NAcoord: 79..85 score: NAcoord: 113..136 score: NAcoord: 146..153 score: NAcoord: 156..166 score
None	No IPR available	SEG	seg	seg	coord: 45..55 score: NAcoord: 64..69 score: NAcoord: 75..84 score: NAcoord: 85..107 score: NAcoord: 112..117 score: NAcoord: 131..137 score: NAcoord: 147..154 score: NAcoord: 157..165 score: NAcoord: 168..175 score: NAcoord: 181..190 score: NAcoord: 200..208 score: NAcoord: 212..222 score: NAcoord: 227..244 score: NAcoord: 248..260 score
None	No IPR available	SEG	seg	seg	coord: 7..13 score: NAcoord: 21..27 score: NAcoord: 46..56 score
None	No IPR available	SEG	seg	seg	coord: 12..19 score: NAcoord: 58..63 score
None	No IPR available	SEG	seg	seg	coord: 13..25 score: NAcoord: 38..49 score: NAcoord: 53..61 score: NAcoord: 65..76 score: NAcoord: 79..84 score: NAcoord: 96..111 score: NAcoord: 119..126 score: NAcoord: 136..142 score
None	No IPR available	SEG	seg	seg	coord: 18..21 score: NAcoord: 40..46 score: NAcoord: 55..62 score: NAcoord: 68..77 score
None	No IPR available	SEG	seg	seg	coord: 20..33 score: NAcoord: 36..52 score
None	No IPR available	SEG	seg	seg	coord: 11..16 score: NAcoord: 53..65 score: NAcoord: 75..83 score
IPR001190	Speract/scavenger receptor	PROFILE	PS50287	SRCR_2	coord: 17..135 score: 7

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>HO066686 ID=HO066686; Name=HO066686; organism=Cicer arietinum; type=EST; length=850bp
ANAAATTAAGACNCTTGGGGGNGGNTTNTNCCCAATTTGGGGATNGAACN
CGGTACAGGCCGGGNCCGCCGCAATTTCNCCTATACCNGANATTTCGCCA
GAAGTGGTTCGNCGCCGCNGNAGAGGGACACATCTGCGTGTGTACTNTNT
GTCNNTGTCTTNTGNNTATGTNTCTCTCTGTNAGAAAGACTNGGCNTNAA
GACNTTANNCACNCTGTCTGNGCNATNTNTTGNGAATTTANATGTANANG
GNANCTNNTACGTACTTCTNNCNGCAGCATTCTTNCTGNATCTNCTGGAG
GTGCCTCTCTNGGTNTCAGGAGANACATACATCCCNTTTTGNTTNTACAN
CNATATNCNGGGACACTGNNNTCCCATTNTTATNNTCCGACNNCTCGNCN
CNTACGNNTCTNGTTACANTCNACTTCTNCCTCNTNCGACNCNTTNAAGC
ANNGGGNCNAANNAGACCTANNNNCTTNCANCATNCAGNCTCNNNGAGTN
AGTGTGTNANTANNAACANTCACTGTTAAGNCACANCTCATACNATNTGC
NNNCTCNCANGGAAANNTTNTNTTATNGCACANTAACACACCTANCCCTA
NNTTGGNCNNNNCNCNTANNNNTCNGCGCTTCACTNTACNTNCGTCNNCC
TNNTACNTNCNCCANNCCACNTNTNCNCTAGCCNATNAANATAGNTNTTN
TCNGNNAGANANATANNCAGCGNTCATNTNACANCATGTCCCNNCNNNAN
ATNNNTNTNNCCNTCTTCTCTNAANNNCNNNCGTANNANANNTCCCTTNC
TCCAAACATTCGANCAATTATTNCGNCNTCTAGGACTACNNANAANNCNG

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005044	scavenger receptor activity

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane

Vocabulary: **INTERPRO**
Term	Definition
IPR001190	SRCR

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