HO067289

EST Overview


Name	HO067289
Unique Name	HO067289
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	498

Libraries


Library Name	Type
LIBEST_026414 Chickpea drought stressed cDNA SSH library BULK1	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

[Close]

BLAST of HO067289 vs. TrEMBL
Match: B9HWJ2_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_566639 PE=4 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 4.889e-24
Identity = 67/147 (45.58%), Postives = 89/147 (60.54%), Query Frame = 3

Query:   63 DGPELEQNFQSTPGIRPKKKQRFTKIDG------KDEVDLIAHKLGNLSNSKINTKTSMGNNSVKLVGSTILPTIIETNEHASQYLAVGSHVEVLSQDSGITGCWFRASVIKMHKDKVKVQYRDIQDADDESKKLEEWTIASRIAVP 485
            +G  +E +  +   +RPKK+ R  K +G      K+        + NL NS+I++KT     S +    T   +  E  ++  Q L V S VEVLSQDSGI GCWFRAS+IK HKDKVKV+Y+DI DA DE+ KLEEW +ASR+A P
Sbjct:  212 NGLRVEGHDNNASRMRPKKRLRRLKDNGDFCIVRKESTTARCFNMQNLHNSRIDSKTGNEICSQRGEEHTAFLSTTEVMQNP-QNLHVDSEVEVLSQDSGIRGCWFRASIIKKHKDKVKVRYQDISDAADEANKLEEWVLASRVAAP 357

[Close]

BLAST of HO067289 vs. TrEMBL
Match: B9ST04_RICCO (DNA binding protein, putative OS=Ricinus communis GN=RCOM_0353100 PE=4 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 4.576e-22
Identity = 65/169 (38.46%), Postives = 91/169 (53.85%), Query Frame = 3

Query:    6 RYMYPXXXXXXXXXXXXXEDGPELEQNFQSTPGIRPKKKQRFTKID----GKDEVDLIAHKLGNLSNSKINTK--TSM----GNNSVKLVGSTILPTIIETNEHASQYLAVGSHVEVLSQDSGITGCWFRASVIKMHKDKVKVQYRDIQDADDESKKLEEWTIASRIAV 482
            RY+Y              +   +LE N       RP+K+   +K D     K  VD +   + ++ NS  + K  T M    G  S+  + +T         ++  QYL VGS VEVLSQDSGI GCWFRA +IK+HK KVKV+Y DI+DA++E+  LEEW + +R+AV
Sbjct:  283 RYLYTVSSIMEQRDSQHPDAAQKLETNINDDSEFRPRKRHHRSKDDLHAGAKQPVDTMDVNMHDVDNSWADCKRPTEMCCLTGGESIAPLSTT------GAEQNPLQYLKVGSKVEVLSQDSGIRGCWFRALIIKVHKSKVKVRYEDIKDAENEANNLEEWILTTRVAV 445

[Close]

BLAST of HO067289 vs. TrEMBL
Match: Q9SX21_ARATH (F24J5.18 protein OS=Arabidopsis thaliana GN=F24J5.18 PE=4 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 7.305e-20
Identity = 45/64 (70.31%), Postives = 55/64 (85.94%), Query Frame = 3

Query:  288 ASQYLAVGSHVEVLSQDSGITGCWFRASVIKMHKDKVKVQYRDIQDADDESKKLEEWTIASRIA 479
            +S ++  GS +EVLS+DSGI GCWF+A V+K HKDKVKVQY+DIQDADDESKKLEEW + SR+A
Sbjct:  336 SSHHIKKGSLIEVLSEDSGIRGCWFKALVLKKHKDKVKVQYQDIQDADDESKKLEEWILTSRVA 399

[Close]

BLAST of HO067289 vs. TrEMBL
Match: Q8L7Q0_ARATH (At1g68580 OS=Arabidopsis thaliana GN=At1g68580 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 7.305e-20
Identity = 45/64 (70.31%), Postives = 55/64 (85.94%), Query Frame = 3

Query:  288 ASQYLAVGSHVEVLSQDSGITGCWFRASVIKMHKDKVKVQYRDIQDADDESKKLEEWTIASRIA 479
            +S ++  GS +EVLS+DSGI GCWF+A V+K HKDKVKVQY+DIQDADDESKKLEEW + SR+A
Sbjct:  359 SSHHIKKGSLIEVLSEDSGIRGCWFKALVLKKHKDKVKVQYQDIQDADDESKKLEEWILTSRVA 422

[Close]

BLAST of HO067289 vs. TrEMBL
Match: Q3ECG0_ARATH (Putative uncharacterized protein At1g68580.1 OS=Arabidopsis thaliana GN=At1g68580 PE=4 SV=2)

HSP 1 Score: 100.138 bits (248), Expect = 7.305e-20
Identity = 45/64 (70.31%), Postives = 55/64 (85.94%), Query Frame = 3

Query:  288 ASQYLAVGSHVEVLSQDSGITGCWFRASVIKMHKDKVKVQYRDIQDADDESKKLEEWTIASRIA 479
            +S ++  GS +EVLS+DSGI GCWF+A V+K HKDKVKVQY+DIQDADDESKKLEEW + SR+A
Sbjct:  263 SSHHIKKGSLIEVLSEDSGIRGCWFKALVLKKHKDKVKVQYQDIQDADDESKKLEEWILTSRVA 326

[Close]

BLAST of HO067289 vs. TrEMBL
Match: B9HJ16_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_420788 PE=4 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 1.627e-19
Identity = 46/71 (64.79%), Postives = 56/71 (78.87%), Query Frame = 3

Query:  273 ETNEHASQYLAVGSHVEVLSQDSGITGCWFRASVIKMHKDKVKVQYRDIQDADDESKKLEEWTIASRIAVP 485
            E  ++  Q L V S VEVLSQDSGI GCWFRAS+IK HKDKVKV+Y+DI DA +E++KLEEW + SR+A P
Sbjct:  318 EVMQNPPQSLNVSSEVEVLSQDSGIRGCWFRASIIKKHKDKVKVRYQDISDAANEAQKLEEWVLVSRVAAP 388

[Close]

BLAST of HO067289 vs. TrEMBL
Match: D7KWD9_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_475982 PE=4 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 3.626e-19
Identity = 44/64 (68.75%), Postives = 54/64 (84.38%), Query Frame = 3

Query:  288 ASQYLAVGSHVEVLSQDSGITGCWFRASVIKMHKDKVKVQYRDIQDADDESKKLEEWTIASRIA 479
            +S ++  GS VEVLS+DSGI GCWF+A ++K HKDKVKVQY+DIQDADDESKK EEW + SR+A
Sbjct:  360 SSHHIKKGSLVEVLSEDSGIRGCWFKALILKKHKDKVKVQYQDIQDADDESKKQEEWILTSRVA 423

[Close]

BLAST of HO067289 vs. TrEMBL
Match: D7T964_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_11.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00011913001 PE=4 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 8.077e-19
Identity = 44/64 (68.75%), Postives = 53/64 (82.81%), Query Frame = 3

Query:  294 QYLAVGSHVEVLSQDSGITGCWFRASVIKMHKDKVKVQYRDIQDADDESKKLEEWTIASRIAVP 485
            Q+LA+GS VEVLSQDSGI GCW RA +IK H+ KVKV+Y+DI DA DE+  LEEW +ASR+AVP
Sbjct:   61 QFLAIGSQVEVLSQDSGIRGCWLRALIIKKHRCKVKVRYQDIMDAADETSNLEEWILASRVAVP 124

[Close]

BLAST of HO067289 vs. TrEMBL
Match: C5YL61_SORBI (Putative uncharacterized protein Sb07g021050 OS=Sorghum bicolor GN=Sb07g021050 PE=4 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 8.358e-16
Identity = 39/64 (60.94%), Postives = 50/64 (78.12%), Query Frame = 3

Query:  294 QYLAVGSHVEVLSQDSGITGCWFRASVIKMHKDKVKVQYRDIQDADDESKKLEEWTIASRIAVP 485
            ++L  G HVEVLSQDSGI GCWFR  ++K HKDK+KV+Y D+QDA DE+  LEEW + +R+A P
Sbjct:  365 KHLCPGCHVEVLSQDSGIRGCWFRCLILKRHKDKIKVRYLDLQDA-DETGNLEEWVMLTRVAKP 427

[Close]

BLAST of HO067289 vs. TrEMBL
Match: Q6ZKB4_ORYSJ (Putative uncharacterized protein OJ1111_B08.7 OS=Oryza sativa subsp. japonica GN=OJ1124_B05.16 PE=4 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 7.823e-14
Identity = 41/69 (59.42%), Postives = 49/69 (71.01%), Query Frame = 3

Query:  282 EHASQ-YLAVGSHVEVLSQDSGITGCWFRASVIKMHKDKVKVQYRDIQDADDESKKLEEWTIASRIAVP 485
            EH +Q  L  GS  EVLSQDSGI GCWFR  V+K   DK+KV+Y D+QDA DE+  LEEW + +RIA P
Sbjct:  387 EHKTQKQLYPGSRAEVLSQDSGIRGCWFRCFVLKRRGDKIKVRYEDLQDA-DETGNLEEWVLLTRIAKP 454

[Close]

BLAST of HO067289 vs. TAIR peptide
Match: AT1G68580.2 (| Symbols: | agenet domain-containing protein / bromo-adjacent homology (BAH) domain-containing protein | chr1:25752869-25755631 FORWARD LENGTH=648)

HSP 1 Score: 100.138 bits (248), Expect = 6.420e-22
Identity = 45/64 (70.31%), Postives = 55/64 (85.94%), Query Frame = 3

Query:  288 ASQYLAVGSHVEVLSQDSGITGCWFRASVIKMHKDKVKVQYRDIQDADDESKKLEEWTIASRIA 479
            +S ++  GS +EVLS+DSGI GCWF+A V+K HKDKVKVQY+DIQDADDESKKLEEW + SR+A
Sbjct:  359 SSHHIKKGSLIEVLSEDSGIRGCWFKALVLKKHKDKVKVQYQDIQDADDESKKLEEWILTSRVA 422

[Close]

BLAST of HO067289 vs. TAIR peptide
Match: AT1G68580.1 (| Symbols: | agenet domain-containing protein / bromo-adjacent homology (BAH) domain-containing protein | chr1:25753582-25755059 FORWARD LENGTH=396)

HSP 1 Score: 100.138 bits (248), Expect = 6.420e-22
Identity = 45/64 (70.31%), Postives = 55/64 (85.94%), Query Frame = 3

Query:  288 ASQYLAVGSHVEVLSQDSGITGCWFRASVIKMHKDKVKVQYRDIQDADDESKKLEEWTIASRIA 479
            +S ++  GS +EVLS+DSGI GCWF+A V+K HKDKVKVQY+DIQDADDESKKLEEW + SR+A
Sbjct:  263 SSHHIKKGSLIEVLSEDSGIRGCWFKALVLKKHKDKVKVQYQDIQDADDESKKLEEWILTSRVA 326

[Close]

BLAST of HO067289 vs. TAIR peptide
Match: AT5G55600.3 (| Symbols: | agenet domain-containing protein / bromo-adjacent homology (BAH) domain-containing protein | chr5:22522232-22524796 REVERSE LENGTH=663)

HSP 1 Score: 61.6178 bits (148), Expect = 2.530e-10
Identity = 30/75 (40.00%), Postives = 47/75 (62.67%), Query Frame = 3

Query:  261 PTIIETNEHASQYLAVGSHVEVLSQDSGITGCWFRASVIKMHKDKVKVQYRDIQDADDESKKLEEWTIASRIAVP 485
            PT ++ +   +  +   + +E L QDSGI GCWFR +V+ + + +VK+QY DI+D +D    LEEW  A + A+P
Sbjct:  368 PTNVQKHPCYNGVVKTDAKIEFLCQDSGIRGCWFRCTVLDVSRKQVKLQYDDIED-EDGYGNLEEWVPAFKSAMP 441

[Close]

BLAST of HO067289 vs. TAIR peptide
Match: AT5G55600.2 (| Symbols: | agenet domain-containing protein / bromo-adjacent homology (BAH) domain-containing protein | chr5:22522232-22524796 REVERSE LENGTH=663)

HSP 1 Score: 61.6178 bits (148), Expect = 2.530e-10
Identity = 30/75 (40.00%), Postives = 47/75 (62.67%), Query Frame = 3

Query:  261 PTIIETNEHASQYLAVGSHVEVLSQDSGITGCWFRASVIKMHKDKVKVQYRDIQDADDESKKLEEWTIASRIAVP 485
            PT ++ +   +  +   + +E L QDSGI GCWFR +V+ + + +VK+QY DI+D +D    LEEW  A + A+P
Sbjct:  368 PTNVQKHPCYNGVVKTDAKIEFLCQDSGIRGCWFRCTVLDVSRKQVKLQYDDIED-EDGYGNLEEWVPAFKSAMP 441

[Close]

BLAST of HO067289 vs. TAIR peptide
Match: AT5G55600.1 (| Symbols: | agenet domain-containing protein / bromo-adjacent homology (BAH) domain-containing protein | chr5:22522232-22524796 REVERSE LENGTH=663)

HSP 1 Score: 61.6178 bits (148), Expect = 2.530e-10
Identity = 30/75 (40.00%), Postives = 47/75 (62.67%), Query Frame = 3

Query:  261 PTIIETNEHASQYLAVGSHVEVLSQDSGITGCWFRASVIKMHKDKVKVQYRDIQDADDESKKLEEWTIASRIAVP 485
            PT ++ +   +  +   + +E L QDSGI GCWFR +V+ + + +VK+QY DI+D +D    LEEW  A + A+P
Sbjct:  368 PTNVQKHPCYNGVVKTDAKIEFLCQDSGIRGCWFRCTVLDVSRKQVKLQYDDIED-EDGYGNLEEWVPAFKSAMP 441

The following BLAST results are available for this feature:

BLAST of HO067289 vs. TrEMBL
BLAST of HO067289 vs. TAIR peptide

BLAST of HO067289 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
B9HWJ2_POPTR	4.889e-24	45.58	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
B9ST04_RICCO	4.576e-22	38.46	DNA binding protein, putative OS=Ricinus communis ...	[more]
Q9SX21_ARATH	7.305e-20	70.31	F24J5.18 protein OS=Arabidopsis thaliana GN=F24J5....	[more]
Q8L7Q0_ARATH	7.305e-20	70.31	At1g68580 OS=Arabidopsis thaliana GN=At1g68580 PE=...	[more]
Q3ECG0_ARATH	7.305e-20	70.31	Putative uncharacterized protein At1g68580.1 OS=Ar...	[more]
B9HJ16_POPTR	1.627e-19	64.79	Predicted protein (Fragment) OS=Populus trichocarp...	[more]
D7KWD9_ARALY	3.626e-19	68.75	Putative uncharacterized protein OS=Arabidopsis ly...	[more]
D7T964_VITVI	8.077e-19	68.75	Whole genome shotgun sequence of line PN40024, sca...	[more]
C5YL61_SORBI	8.358e-16	60.94	Putative uncharacterized protein Sb07g021050 OS=So...	[more]
Q6ZKB4_ORYSJ	7.823e-14	59.42	Putative uncharacterized protein OJ1111_B08.7 OS=O...	[more]

BLAST of HO067289 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 5


Match Name	E-value	Identity	Description
AT1G68580.2	6.420e-22	70.31	\| Symbols: \| agenet domain-containing protein / b...	[more]
AT1G68580.1	6.420e-22	70.31	\| Symbols: \| agenet domain-containing protein / b...	[more]
AT5G55600.3	2.530e-10	40.00	\| Symbols: \| agenet domain-containing protein / b...	[more]
AT5G55600.2	2.530e-10	40.00	\| Symbols: \| agenet domain-containing protein / b...	[more]
AT5G55600.1	2.530e-10	40.00	\| Symbols: \| agenet domain-containing protein / b...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 30..45 score
None	No IPR available	SEG	seg	seg	coord: 7..19 score
None	No IPR available	SEG	seg	seg	coord: 15..28 score: NAcoord: 90..103 score
None	No IPR available	SEG	seg	seg	coord: 2..14 score: NAcoord: 15..26 score
IPR008395	Agenet	PFAM	PF05641	Agenet	coord: 103..165 score: 3.3
IPR014002	Tudor-like, plant	SMART	SM00743	no description	coord: 98..165 score: 0.0

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>HO067289 ID=HO067289; Name=HO067289; organism=Cicer arietinum; type=EST; length=498bp
CGGGCAGGTACATGTATCCCAACTCTGACTCAAAGTCTAATGGGAGTTCA
GGGCGATCAGAAGATGGCCCAGAACTGGAACAAAACTTCCAGTCTACTCC
TGGGATCAGACCTAAGAAGAAGCAGCGTTTTACTAAAATTGATGGAAAAG
ATGAGGTGGATTTAATTGCTCATAAATTGGGGAATTTGAGTAATAGTAAG
ATTAATACCAAAACCAGTATGGGTAACAATTCCGTAAAACTGGTTGGTTC
CACCATTTTGCCTACCATCATAGAGACAAATGAACATGCTTCACAGTATT
TAGCTGTTGGTTCCCATGTTGAGGTCCTCTCACAAGACAGTGGGATTACA
GGATGCTGGTTTCGAGCTTCTGTTATCAAGATGCACAAAGATAAAGTGAA
GGTGCAATATCGGGACATCCAGGATGCGGATGATGAATCTAAGAAGCTTG
AGGAATGGACGATAGCTTCTAGAATTGCTGTACCTCGGCCGCGACCAC

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003723	RNA binding

Vocabulary: **INTERPRO**
Term	Definition
IPR008395	Agenet-like_dom
IPR014002	Agenet_dom_plant

Search form