HO664291

EST Overview


Name	HO664291
Unique Name	HO664291
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	229

Libraries


Library Name	Type
LIBEST_026619 TDZ treated Chickpea SSH library	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

[Close]

BLAST of HO664291 vs. TrEMBL
Match: B9RRG5_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1190860 PE=4 SV=1)

HSP 1 Score: 64.6994 bits (156), Expect = 3.455e-9
Identity = 35/64 (54.69%), Postives = 43/64 (67.19%), Query Frame = 3

Query:   21 SVGPKKRKG--EEIKSPSKKRAKPDKEASEDNSDAEDGGKNSEDDQSHSSAENTTQKKQVSTPV 206
            S G KKRK   +E K  SKKR KP ++ +ED+SDAED G  SED +S SSAE   +KK+  TPV
Sbjct:  277 SEGSKKRKRFEKETKVTSKKRVKPTEKVAEDSSDAEDSGNASEDGRSQSSAEKPVKKKEAPTPV 340

[Close]

BLAST of HO664291 vs. TrEMBL
Match: B9GU54_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_816287 PE=4 SV=1)

HSP 1 Score: 57.3806 bits (137), Expect = 5.516e-7
Identity = 33/67 (49.25%), Postives = 43/67 (64.18%), Query Frame = 3

Query:    9 KGKASVGPKKRKG--EEIKSPSKKRAKPDKEASEDNSDAEDGGKNSEDDQSHSSAENTTQKKQVSTP 203
            K + S G KKR+   +E K  + KR KP + A+EDNSD+E  G  SED+ S SSAE   +KK+ STP
Sbjct:  251 KMQNSEGSKKRRRTEKETKVSANKRIKPLETAAEDNSDSEVSGNASEDNNSPSSAEKPVKKKEASTP 317

The following BLAST results are available for this feature:

BLAST of HO664291 vs. TrEMBL

BLAST of HO664291 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 2


Match Name	E-value	Identity	Description
B9RRG5_RICCO	3.455e-9	54.69	Putative uncharacterized protein OS=Ricinus commun...	[more]
B9GU54_POPTR	5.516e-7	49.25	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 1..34 score

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>HO664291 ID=HO664291; Name=HO664291; organism=Cicer arietinum; type=EST; length=229bp
GTGTTCCAAAAGGTAAGGCTTCTGTTGGACCCAAAAAGCGTAAAGGAGAA
GAGATCAAATCACCCAGCAAGAAAAGGGCCAAGCCTGATAAAGAAGCCTC
AGAAGACAATAGTGATGCAGAAGATGGTGGAAAAAACTCTGAAGATGATC
AGTCCCATTCATCAGCAGAGAATACTACGCAGAAGAAACAAGTTTCAACT
CCTGTTGTGAACCTGCCCGGGCGGCCGCT

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