FE668999
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FE668999 vs. SwissProt
Match: AB1A_ARATH (ABC transporter A family member 1 OS=Arabidopsis thaliana GN=ABCA1 PE=2 SV=2) HSP 1 Score: 173.711 bits (439), Expect = 3.678e-43 Identity = 87/147 (59.18%), Postives = 106/147 (72.11%), Query Frame = 2 Query: 38 RQLKVMLRKNCLLKIRHPFVTXXXXXXXXXXXXXXXXXRTRVDTQIHPAQSHIQKDMFVEVGKGISPNFQQVIESLLDKKEHLAFAPDTKETRMMIDVVSIKFPLLKLVSIVYKDEVELETYIRSDAYGICHDIRNCSNPKIKGAVV 478 RQ K MLRKN LLK RHPFVT RTRVDT IHPA S+I KD VEVGKG SP+F +V++ LL + + LAFAPDT ET MID++S+KFP L+LV+ ++KD++ELETYI S YG+C ++RNCSNPKIKGAVV Sbjct: 6 RQFKAMLRKNWLLKTRHPFVTSAEILLPTIVMLLLIAVRTRVDTTIHPAHSNIDKDTVVEVGKGNSPSFPEVLKLLLAEGDFLAFAPDTDETNNMIDILSLKFPELRLVTKIFKDDIELETYITSAHYGVCSEVRNCSNPKIKGAVV 152
BLAST of FE668999 vs. TrEMBL
Match: B9H9T2_POPTR (ABC transporter family, cholesterol/phospholipid flippase OS=Populus trichocarpa GN=PtrAOH1 PE=4 SV=1) HSP 1 Score: 191.815 bits (486), Expect = 1.844e-47 Identity = 94/147 (63.95%), Postives = 116/147 (78.91%), Query Frame = 2 Query: 38 RQLKVMLRKNCLLKIRHPFVTXXXXXXXXXXXXXXXXXRTRVDTQIHPAQSHIQKDMFVEVGKGISPNFQQVIESLLDKKEHLAFAPDTKETRMMIDVVSIKFPLLKLVSIVYKDEVELETYIRSDAYGICHDIRNCSNPKIKGAVV 478 RQL+ MLRKN LLKIRHPF+T RTRVD QIHPAQ+ I+++M VEVGKG+SPNFQ+V+E+LL + E LAFAPDT+ETRMMI+++SIKFPLL+ VS++YKDE+ELETY+ SD YG C ++NCSNPKIKGAVV Sbjct: 6 RQLRAMLRKNWLLKIRHPFITSAEILLPTIVMLLLIAVRTRVDLQIHPAQACIKENMLVEVGKGMSPNFQEVLEALLVRGEFLAFAPDTEETRMMINLMSIKFPLLQQVSLIYKDELELETYLTSDLYGTCSQVKNCSNPKIKGAVV 152
BLAST of FE668999 vs. TrEMBL
Match: D7THU8_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_7.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00033258001 PE=4 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 9.153e-47 Identity = 96/147 (65.31%), Postives = 116/147 (78.91%), Query Frame = 2 Query: 41 QLKVMLRKNCLLKIRHPFVTXXXXXXXXXXXXXXXXXRTRVDTQIHPAQSHIQKDMFVEVGKG-ISPNFQQVIESLLDKKEHLAFAPDTKETRMMIDVVSIKFPLLKLVSIVYKDEVELETYIRSDAYGICHDIRNCSNPKIKGAVV 478 QL+ MLRKN LLKIRHPFVT RT+VDT++H AQ +++K MFVEVGKG +SP+F QV+E LL K E+LAFAPDTKETRMMI+++SIKFPLLKLV+ VYKDE+EL+TYIRSD YG C+ ++NCSNPKIKGAVV Sbjct: 7 QLRAMLRKNWLLKIRHPFVTCAEILLPTVVMLMLIAVRTQVDTKVHSAQPYVRKGMFVEVGKGDVSPSFGQVLELLLAKGEYLAFAPDTKETRMMINLMSIKFPLLKLVTRVYKDELELDTYIRSDLYGTCNQVKNCSNPKIKGAVV 153
BLAST of FE668999 vs. TrEMBL
Match: A5CBI6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_031181 PE=4 SV=1) HSP 1 Score: 188.348 bits (477), Expect = 2.039e-46 Identity = 96/147 (65.31%), Postives = 115/147 (78.23%), Query Frame = 2 Query: 41 QLKVMLRKNCLLKIRHPFVTXXXXXXXXXXXXXXXXXRTRVDTQIHPAQSHIQKDMFVEVGKG-ISPNFQQVIESLLDKKEHLAFAPDTKETRMMIDVVSIKFPLLKLVSIVYKDEVELETYIRSDAYGICHDIRNCSNPKIKGAVV 478 QL MLRKN LLKIRHPFVT RT+VDT++H AQ +++K MFVEVGKG +SP+F QV+E LL K E+LAFAPDTKETRMMI+++SIKFPLLKLV+ VYKDE+EL+TYIRSD YG C+ ++NCSNPKIKGAVV Sbjct: 7 QLXAMLRKNWLLKIRHPFVTCAEILLPTVVMLMLIAVRTQVDTKVHSAQPYVRKGMFVEVGKGDVSPSFGQVLELLLAKGEYLAFAPDTKETRMMINLMSIKFPLLKLVTRVYKDELELDTYIRSDLYGTCNQVKNCSNPKIKGAVV 153
BLAST of FE668999 vs. TrEMBL
Match: D7LHA5_ARALY (ATPase, coupled to transmembrane movement of substances OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_483249 PE=4 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 2.110e-43 Identity = 90/147 (61.22%), Postives = 109/147 (74.15%), Query Frame = 2 Query: 38 RQLKVMLRKNCLLKIRHPFVTXXXXXXXXXXXXXXXXXRTRVDTQIHPAQSHIQKDMFVEVGKGISPNFQQVIESLLDKKEHLAFAPDTKETRMMIDVVSIKFPLLKLVSIVYKDEVELETYIRSDAYGICHDIRNCSNPKIKGAVV 478 RQLK MLRKN LLK RHPFVT RTRVDT IHPA+S+I+KD VEVGKG SP+F QV++ LL + E LAFAPDT ET MID++S+KFP L+LV+ ++KD++ELETYI S YG+C ++RNCSNPKIKGAVV Sbjct: 6 RQLKAMLRKNWLLKTRHPFVTSAEILLPTLVMLLLIAVRTRVDTTIHPARSNIEKDTIVEVGKGNSPSFPQVLKLLLAEGEFLAFAPDTDETNNMIDILSLKFPELRLVTKIFKDDIELETYITSAHYGLCTEVRNCSNPKIKGAVV 152
BLAST of FE668999 vs. TrEMBL
Match: B9SU42_RICCO (Abc transporter, putative OS=Ricinus communis GN=RCOM_1216160 PE=4 SV=1) HSP 1 Score: 61.6178 bits (148), Expect = 2.879e-8 Identity = 26/38 (68.42%), Postives = 32/38 (84.21%), Query Frame = 2 Query: 365 SIVYKDEVELETYIRSDAYGICHDIRNCSNPKIKGAVV 478 S +YKDE+ELETYI SD YG C ++NCSNPKIKGA++ Sbjct: 5 SRIYKDELELETYICSDHYGACGGVKNCSNPKIKGAII 42
BLAST of FE668999 vs. TAIR peptide
Match: AT2G41700.1 (| Symbols: ABCA1, AtABCA1 | ATP-binding cassette A1 | chr2:17383239-17396110 REVERSE LENGTH=1882) HSP 1 Score: 173.711 bits (439), Expect = 4.265e-44 Identity = 87/147 (59.18%), Postives = 106/147 (72.11%), Query Frame = 2 Query: 38 RQLKVMLRKNCLLKIRHPFVTXXXXXXXXXXXXXXXXXRTRVDTQIHPAQSHIQKDMFVEVGKGISPNFQQVIESLLDKKEHLAFAPDTKETRMMIDVVSIKFPLLKLVSIVYKDEVELETYIRSDAYGICHDIRNCSNPKIKGAVV 478 RQ K MLRKN LLK RHPFVT RTRVDT IHPA S+I KD VEVGKG SP+F +V++ LL + + LAFAPDT ET MID++S+KFP L+LV+ ++KD++ELETYI S YG+C ++RNCSNPKIKGAVV Sbjct: 6 RQFKAMLRKNWLLKTRHPFVTSAEILLPTIVMLLLIAVRTRVDTTIHPAHSNIDKDTVVEVGKGNSPSFPEVLKLLLAEGDFLAFAPDTDETNNMIDILSLKFPELRLVTKIFKDDIELETYITSAHYGVCSEVRNCSNPKIKGAVV 152
BLAST of FE668999 vs. TAIR peptide
Match: AT2G41700.2 (| Symbols: ABCA1, AtABCA1 | ATP-binding cassette A1 | chr2:17383239-17395932 REVERSE LENGTH=1846) HSP 1 Score: 147.517 bits (371), Expect = 3.273e-36 Identity = 70/109 (64.22%), Postives = 89/109 (81.65%), Query Frame = 2 Query: 152 RTRVDTQIHPAQSHIQKDMFVEVGKGISPNFQQVIESLLDKKEHLAFAPDTKETRMMIDVVSIKFPLLKLVSIVYKDEVELETYIRSDAYGICHDIRNCSNPKIKGAVV 478 RTRVDT IHPA S+I KD VEVGKG SP+F +V++ LL + + LAFAPDT ET MID++S+KFP L+LV+ ++KD++ELETYI S YG+C ++RNCSNPKIKGAVV Sbjct: 38 RTRVDTTIHPAHSNIDKDTVVEVGKGNSPSFPEVLKLLLAEGDFLAFAPDTDETNNMIDILSLKFPELRLVTKIFKDDIELETYITSAHYGVCSEVRNCSNPKIKGAVV 146 The following BLAST results are available for this feature:
BLAST of FE668999 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot) Total hits: 1
BLAST of FE668999 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl) Total hits: 5
BLAST of FE668999 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide) Total hits: 2
InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FE668999 ID=FE668999; Name=FE668999; organism=Cicer arietinum; type=EST; length=479bpback to top |