FE668999

EST Overview
NameFE668999
Unique NameFE668999
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length479
Libraries
Library NameType
LIBEST_022821 Chickpea leave librarycdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Homology
BLAST of FE668999 vs. SwissProt
Match: AB1A_ARATH (ABC transporter A family member 1 OS=Arabidopsis thaliana GN=ABCA1 PE=2 SV=2)

HSP 1 Score: 173.711 bits (439), Expect = 3.678e-43
Identity = 87/147 (59.18%), Postives = 106/147 (72.11%), Query Frame = 2
Query:   38 RQLKVMLRKNCLLKIRHPFVTXXXXXXXXXXXXXXXXXRTRVDTQIHPAQSHIQKDMFVEVGKGISPNFQQVIESLLDKKEHLAFAPDTKETRMMIDVVSIKFPLLKLVSIVYKDEVELETYIRSDAYGICHDIRNCSNPKIKGAVV 478
            RQ K MLRKN LLK RHPFVT                 RTRVDT IHPA S+I KD  VEVGKG SP+F +V++ LL + + LAFAPDT ET  MID++S+KFP L+LV+ ++KD++ELETYI S  YG+C ++RNCSNPKIKGAVV
Sbjct:    6 RQFKAMLRKNWLLKTRHPFVTSAEILLPTIVMLLLIAVRTRVDTTIHPAHSNIDKDTVVEVGKGNSPSFPEVLKLLLAEGDFLAFAPDTDETNNMIDILSLKFPELRLVTKIFKDDIELETYITSAHYGVCSEVRNCSNPKIKGAVV 152          
BLAST of FE668999 vs. TrEMBL
Match: B9H9T2_POPTR (ABC transporter family, cholesterol/phospholipid flippase OS=Populus trichocarpa GN=PtrAOH1 PE=4 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 1.844e-47
Identity = 94/147 (63.95%), Postives = 116/147 (78.91%), Query Frame = 2
Query:   38 RQLKVMLRKNCLLKIRHPFVTXXXXXXXXXXXXXXXXXRTRVDTQIHPAQSHIQKDMFVEVGKGISPNFQQVIESLLDKKEHLAFAPDTKETRMMIDVVSIKFPLLKLVSIVYKDEVELETYIRSDAYGICHDIRNCSNPKIKGAVV 478
            RQL+ MLRKN LLKIRHPF+T                 RTRVD QIHPAQ+ I+++M VEVGKG+SPNFQ+V+E+LL + E LAFAPDT+ETRMMI+++SIKFPLL+ VS++YKDE+ELETY+ SD YG C  ++NCSNPKIKGAVV
Sbjct:    6 RQLRAMLRKNWLLKIRHPFITSAEILLPTIVMLLLIAVRTRVDLQIHPAQACIKENMLVEVGKGMSPNFQEVLEALLVRGEFLAFAPDTEETRMMINLMSIKFPLLQQVSLIYKDELELETYLTSDLYGTCSQVKNCSNPKIKGAVV 152          
BLAST of FE668999 vs. TrEMBL
Match: D7THU8_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_7.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00033258001 PE=4 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 9.153e-47
Identity = 96/147 (65.31%), Postives = 116/147 (78.91%), Query Frame = 2
Query:   41 QLKVMLRKNCLLKIRHPFVTXXXXXXXXXXXXXXXXXRTRVDTQIHPAQSHIQKDMFVEVGKG-ISPNFQQVIESLLDKKEHLAFAPDTKETRMMIDVVSIKFPLLKLVSIVYKDEVELETYIRSDAYGICHDIRNCSNPKIKGAVV 478
            QL+ MLRKN LLKIRHPFVT                 RT+VDT++H AQ +++K MFVEVGKG +SP+F QV+E LL K E+LAFAPDTKETRMMI+++SIKFPLLKLV+ VYKDE+EL+TYIRSD YG C+ ++NCSNPKIKGAVV
Sbjct:    7 QLRAMLRKNWLLKIRHPFVTCAEILLPTVVMLMLIAVRTQVDTKVHSAQPYVRKGMFVEVGKGDVSPSFGQVLELLLAKGEYLAFAPDTKETRMMINLMSIKFPLLKLVTRVYKDELELDTYIRSDLYGTCNQVKNCSNPKIKGAVV 153          
BLAST of FE668999 vs. TrEMBL
Match: A5CBI6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_031181 PE=4 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 2.039e-46
Identity = 96/147 (65.31%), Postives = 115/147 (78.23%), Query Frame = 2
Query:   41 QLKVMLRKNCLLKIRHPFVTXXXXXXXXXXXXXXXXXRTRVDTQIHPAQSHIQKDMFVEVGKG-ISPNFQQVIESLLDKKEHLAFAPDTKETRMMIDVVSIKFPLLKLVSIVYKDEVELETYIRSDAYGICHDIRNCSNPKIKGAVV 478
            QL  MLRKN LLKIRHPFVT                 RT+VDT++H AQ +++K MFVEVGKG +SP+F QV+E LL K E+LAFAPDTKETRMMI+++SIKFPLLKLV+ VYKDE+EL+TYIRSD YG C+ ++NCSNPKIKGAVV
Sbjct:    7 QLXAMLRKNWLLKIRHPFVTCAEILLPTVVMLMLIAVRTQVDTKVHSAQPYVRKGMFVEVGKGDVSPSFGQVLELLLAKGEYLAFAPDTKETRMMINLMSIKFPLLKLVTRVYKDELELDTYIRSDLYGTCNQVKNCSNPKIKGAVV 153          
BLAST of FE668999 vs. TrEMBL
Match: D7LHA5_ARALY (ATPase, coupled to transmembrane movement of substances OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_483249 PE=4 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 2.110e-43
Identity = 90/147 (61.22%), Postives = 109/147 (74.15%), Query Frame = 2
Query:   38 RQLKVMLRKNCLLKIRHPFVTXXXXXXXXXXXXXXXXXRTRVDTQIHPAQSHIQKDMFVEVGKGISPNFQQVIESLLDKKEHLAFAPDTKETRMMIDVVSIKFPLLKLVSIVYKDEVELETYIRSDAYGICHDIRNCSNPKIKGAVV 478
            RQLK MLRKN LLK RHPFVT                 RTRVDT IHPA+S+I+KD  VEVGKG SP+F QV++ LL + E LAFAPDT ET  MID++S+KFP L+LV+ ++KD++ELETYI S  YG+C ++RNCSNPKIKGAVV
Sbjct:    6 RQLKAMLRKNWLLKTRHPFVTSAEILLPTLVMLLLIAVRTRVDTTIHPARSNIEKDTIVEVGKGNSPSFPQVLKLLLAEGEFLAFAPDTDETNNMIDILSLKFPELRLVTKIFKDDIELETYITSAHYGLCTEVRNCSNPKIKGAVV 152          
BLAST of FE668999 vs. TrEMBL
Match: B9SU42_RICCO (Abc transporter, putative OS=Ricinus communis GN=RCOM_1216160 PE=4 SV=1)

HSP 1 Score: 61.6178 bits (148), Expect = 2.879e-8
Identity = 26/38 (68.42%), Postives = 32/38 (84.21%), Query Frame = 2
Query:  365 SIVYKDEVELETYIRSDAYGICHDIRNCSNPKIKGAVV 478
            S +YKDE+ELETYI SD YG C  ++NCSNPKIKGA++
Sbjct:    5 SRIYKDELELETYICSDHYGACGGVKNCSNPKIKGAII 42          
BLAST of FE668999 vs. TAIR peptide
Match: AT2G41700.1 (| Symbols: ABCA1, AtABCA1 | ATP-binding cassette A1 | chr2:17383239-17396110 REVERSE LENGTH=1882)

HSP 1 Score: 173.711 bits (439), Expect = 4.265e-44
Identity = 87/147 (59.18%), Postives = 106/147 (72.11%), Query Frame = 2
Query:   38 RQLKVMLRKNCLLKIRHPFVTXXXXXXXXXXXXXXXXXRTRVDTQIHPAQSHIQKDMFVEVGKGISPNFQQVIESLLDKKEHLAFAPDTKETRMMIDVVSIKFPLLKLVSIVYKDEVELETYIRSDAYGICHDIRNCSNPKIKGAVV 478
            RQ K MLRKN LLK RHPFVT                 RTRVDT IHPA S+I KD  VEVGKG SP+F +V++ LL + + LAFAPDT ET  MID++S+KFP L+LV+ ++KD++ELETYI S  YG+C ++RNCSNPKIKGAVV
Sbjct:    6 RQFKAMLRKNWLLKTRHPFVTSAEILLPTIVMLLLIAVRTRVDTTIHPAHSNIDKDTVVEVGKGNSPSFPEVLKLLLAEGDFLAFAPDTDETNNMIDILSLKFPELRLVTKIFKDDIELETYITSAHYGVCSEVRNCSNPKIKGAVV 152          
BLAST of FE668999 vs. TAIR peptide
Match: AT2G41700.2 (| Symbols: ABCA1, AtABCA1 | ATP-binding cassette A1 | chr2:17383239-17395932 REVERSE LENGTH=1846)

HSP 1 Score: 147.517 bits (371), Expect = 3.273e-36
Identity = 70/109 (64.22%), Postives = 89/109 (81.65%), Query Frame = 2
Query:  152 RTRVDTQIHPAQSHIQKDMFVEVGKGISPNFQQVIESLLDKKEHLAFAPDTKETRMMIDVVSIKFPLLKLVSIVYKDEVELETYIRSDAYGICHDIRNCSNPKIKGAVV 478
            RTRVDT IHPA S+I KD  VEVGKG SP+F +V++ LL + + LAFAPDT ET  MID++S+KFP L+LV+ ++KD++ELETYI S  YG+C ++RNCSNPKIKGAVV
Sbjct:   38 RTRVDTTIHPAHSNIDKDTVVEVGKGNSPSFPEVLKLLLAEGDFLAFAPDTDETNNMIDILSLKFPELRLVTKIFKDDIELETYITSAHYGVCSEVRNCSNPKIKGAVV 146          
The following BLAST results are available for this feature:
BLAST of FE668999 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 1
Match NameE-valueIdentityDescription
AB1A_ARATH3.678e-4359.18ABC transporter A family member 1 OS=Arabidopsis t... [more]
back to top
BLAST of FE668999 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 5
Match NameE-valueIdentityDescription
B9H9T2_POPTR1.844e-4763.95ABC transporter family, cholesterol/phospholipid f... [more]
D7THU8_VITVI9.153e-4765.31Whole genome shotgun sequence of line PN40024, sca... [more]
A5CBI6_VITVI2.039e-4665.31Putative uncharacterized protein OS=Vitis vinifera... [more]
D7LHA5_ARALY2.110e-4361.22ATPase, coupled to transmembrane movement of subst... [more]
B9SU42_RICCO2.879e-868.42Abc transporter, putative OS=Ricinus communis GN=R... [more]
back to top
BLAST of FE668999 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 2
Match NameE-valueIdentityDescription
AT2G41700.14.265e-4459.18| Symbols: ABCA1, AtABCA1 | ATP-binding cassette A... [more]
AT2G41700.23.273e-3664.22| Symbols: ABCA1, AtABCA1 | ATP-binding cassette A... [more]
back to top
InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR19229ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A (ABCA)coord: 13..147
score: 3.4
NoneNo IPR availablePANTHERPTHR19229:SF26ABC TRANSPORTERcoord: 13..147
score: 3.4
NoneNo IPR availableSEGsegsegcoord: 34..50
score

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>FE668999 ID=FE668999; Name=FE668999; organism=Cicer arietinum; type=EST; length=479bp
CCCCGGGCTGCGGGCGCAACCATGGGACCTTCTTGGGAGGCAGTTGAAGG
TTATGCTCAGAAAAAACTGCCTCCTCAAAATTCGTCACCCTTTCGTTACT
GCTGCTGAGATTTTGCTTCCTGCGATTGTGTTGTTGCTATTAGCAGCTGT
AAGGACACGTGTGGATACACAAATTCATCCAGCTCAATCGCACATTCAGA
AAGACATGTTTGTAGAAGTAGGGAAAGGTATATCCCCTAACTTCCAACAA
GTGATAGAATCCTTGTTGGATAAGAAAGAGCATTTAGCTTTTGCACCAGA
TACCAAAGAAACAAGGATGATGATAGACGTGGTGTCAATCAAATTTCCAC
TTTTGAAGCTTGTTAGTATTGTATACAAAGACGAGGTAGAGTTGGAAACC
TACATCCGGTCAGATGCTTATGGTATCTGTCATGACATAAGGAATTGTTC
AAATCCCAAAATTAAAGGAGCAGTTGTAT
back to top