FE670132

EST Overview


Name	FE670132
Unique Name	FE670132
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	275

Libraries


Library Name	Type
LIBEST_022821 Chickpea leave library	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

[Close]

BLAST of FE670132 vs. SwissProt
Match: P2A15_ARATH (F-box protein PP2-A15 OS=Arabidopsis thaliana GN=PP2A15 PE=2 SV=1)

HSP 1 Score: 63.1586 bits (152), Expect = 4.908e-10
Identity = 30/61 (49.18%), Postives = 38/61 (62.30%), Query Frame = 2

Query:   92 MGISLSCFRPDPTTASSGSTLYDLPESCVASIISYMDPPQICQLATLNHAFRAASSADFVW 274
            MG SLS         + G  L D+PESCVA +  Y+ PP+IC LA LN +FR A+S+D VW
Sbjct:    1 MGSSLSNLNDGTNGLAMGPGLGDIPESCVACVFMYLTPPEICNLAGLNRSFRGAASSDSVW 61

[Close]

BLAST of FE670132 vs. SwissProt
Match: P2A13_ARATH (F-box protein PP2-A13 OS=Arabidopsis thaliana GN=PP2A13 PE=1 SV=1)

HSP 1 Score: 62.7734 bits (151), Expect = 6.410e-10
Identity = 27/41 (65.85%), Postives = 34/41 (82.93%), Query Frame = 2

Query:  152 LYDLPESCVASIISYMDPPQICQLATLNHAFRAASSADFVW 274
            L DLPE+CVA I++ +DPP+IC+LA LN  FR ASSADF+W
Sbjct:   25 LVDLPENCVALIMTRLDPPEICRLARLNRMFRRASSADFIW 65

[Close]

BLAST of FE670132 vs. SwissProt
Match: P2A11_ARATH (F-box protein PP2-A11 OS=Arabidopsis thaliana GN=PP2A11 PE=1 SV=1)

HSP 1 Score: 54.299 bits (129), Expect = 2.280e-7
Identity = 25/41 (60.98%), Postives = 30/41 (73.17%), Query Frame = 2

Query:  152 LYDLPESCVASIISYMDPPQICQLATLNHAFRAASSADFVW 274
            L DLPESCVA I+  +DP +IC+ + LN AF  AS ADFVW
Sbjct:   26 LGDLPESCVALILQNLDPVEICRFSKLNTAFHGASWADFVW 66

[Close]

BLAST of FE670132 vs. SwissProt
Match: P2A12_ARATH (F-box protein PP2-A12 OS=Arabidopsis thaliana GN=P2A12 PE=2 SV=1)

HSP 1 Score: 53.5286 bits (127), Expect = 3.889e-7
Identity = 30/58 (51.72%), Postives = 36/58 (62.07%), Query Frame = 2

Query:  101 SLSCFRPDPTTASSGSTLYDLPESCVASIISYMDPPQICQLATLNHAFRAASSADFVW 274
            S SCF  D      G  L DLPE+CVA I+  +DP +IC+ + LN AFR AS AD VW
Sbjct:   14 SSSCFG-DRNILKPG--LGDLPEACVAIIVENLDPVEICRFSKLNRAFRGASWADCVW 68

[Close]

BLAST of FE670132 vs. TrEMBL
Match: B9SRL8_RICCO (ATPP2-A13, putative OS=Ricinus communis GN=RCOM_0840510 PE=4 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.859e-10
Identity = 32/61 (52.46%), Postives = 41/61 (67.21%), Query Frame = 2

Query:   92 MGISLSCFRPDPTTASSGSTLYDLPESCVASIISYMDPPQICQLATLNHAFRAASSADFVW 274
            MG SLS        A++G  L D+PESCVA + +Y+ PP+IC LA LN AFR A+S+D VW
Sbjct:    1 MGASLSSLTEGTNGAANGPGLGDIPESCVACVFTYLTPPEICNLARLNRAFRGAASSDSVW 61

[Close]

BLAST of FE670132 vs. TrEMBL
Match: D7TW69_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_25.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00019854001 PE=4 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 7.064e-10
Identity = 32/61 (52.46%), Postives = 39/61 (63.93%), Query Frame = 2

Query:   92 MGISLSCFRPDPTTASSGSTLYDLPESCVASIISYMDPPQICQLATLNHAFRAASSADFVW 274
            MG  +S    +     S   L DLPE CVA ++SY+DPP+IC+LA LN AFR AS AD VW
Sbjct:    1 MGTGVSLLACENEGCPSRPRLGDLPEDCVALVLSYLDPPEICKLAKLNRAFRGASRADLVW 61

[Close]

BLAST of FE670132 vs. TrEMBL
Match: B9IC61_POPTR (F-box family protein OS=Populus trichocarpa GN=POPTRDRAFT_1098128 PE=4 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 9.226e-10
Identity = 33/64 (51.56%), Postives = 42/64 (65.62%), Query Frame = 2

Query:   92 MGISLSCFRPDPTTA---SSGSTLYDLPESCVASIISYMDPPQICQLATLNHAFRAASSADFVW 274
            MG +LSC     T     SS   L D+PESC+A ++ ++DPP IC+LA LN AF  ASSADF+W
Sbjct:    1 MGANLSCATLCDTNGEGPSSKPRLGDIPESCLALVLMHLDPPDICKLARLNRAFHGASSADFIW 64

[Close]

BLAST of FE670132 vs. TrEMBL
Match: D7LJ54_ARALY (Predicted protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_669443 PE=4 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 1.205e-9
Identity = 31/61 (50.82%), Postives = 41/61 (67.21%), Query Frame = 2

Query:   92 MGISLSCFRPDPTTASSGSTLYDLPESCVASIISYMDPPQICQLATLNHAFRAASSADFVW 274
            MG S S    D    ++G +L D+PESCVA +I ++ PP+IC LA LN AFR A+S+D VW
Sbjct:    1 MGSSFSNLNGDTNGLATGPSLGDIPESCVAYVILHLTPPEICNLARLNRAFRGAASSDSVW 61

[Close]

BLAST of FE670132 vs. TrEMBL
Match: B9GKN4_POPTR (F-box family protein OS=Populus trichocarpa GN=POPTRDRAFT_1067015 PE=4 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 1.205e-9
Identity = 30/55 (54.55%), Postives = 37/55 (67.27%), Query Frame = 2

Query:  110 CFRPDPTTASSGSTLYDLPESCVASIISYMDPPQICQLATLNHAFRAASSADFVW 274
            C +P P        L DLPESCVA ++ Y++P +IC+LA LN AFR AS ADFVW
Sbjct:   22 CLQPSPPPPRIKPGLGDLPESCVALVLEYLNPSEICRLAKLNRAFRGASWADFVW 76

[Close]

BLAST of FE670132 vs. TrEMBL
Match: B9R9G0_RICCO (ATPP2-A13, putative OS=Ricinus communis GN=RCOM_1496940 PE=4 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 1.574e-9
Identity = 32/63 (50.79%), Postives = 41/63 (65.08%), Query Frame = 2

Query:   92 MGISLSCFRPDPT--TASSGSTLYDLPESCVASIISYMDPPQICQLATLNHAFRAASSADFVW 274
            MG   S F  D     +S G TL D+PESC++SI+  +DPP+IC+LA+LN  F  AS AD VW
Sbjct:    1 MGAGFSSFASDSNGDPSSLGPTLGDVPESCISSILMCLDPPEICKLASLNRTFHGASLADLVW 63

[Close]

BLAST of FE670132 vs. TrEMBL
Match: Q6EP91_ORYSJ (F-box protein-like OS=Oryza sativa subsp. japonica GN=P0135D07.16 PE=2 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 2.055e-9
Identity = 27/43 (62.79%), Postives = 37/43 (86.05%), Query Frame = 2

Query:  146 STLYDLPESCVASIISYMDPPQICQLATLNHAFRAASSADFVW 274
            ++L D+PESCVA+++ Y+DPP+ICQ+A LN AFR A+SAD VW
Sbjct:   17 TSLGDMPESCVAAVLLYLDPPEICQVARLNRAFRGAASADCVW 59

[Close]

BLAST of FE670132 vs. TrEMBL
Match: C5Y195_SORBI (Putative uncharacterized protein Sb04g032000 OS=Sorghum bicolor GN=Sb04g032000 PE=4 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 2.055e-9
Identity = 27/43 (62.79%), Postives = 37/43 (86.05%), Query Frame = 2

Query:  146 STLYDLPESCVASIISYMDPPQICQLATLNHAFRAASSADFVW 274
            ++L D+PESCVA+++ Y+DPP+ICQ+A LN AFR A+SAD VW
Sbjct:   18 TSLGDMPESCVAAVLLYLDPPEICQVARLNRAFRGAASADCVW 60

[Close]

BLAST of FE670132 vs. TrEMBL
Match: B8AGG5_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_08449 PE=4 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 2.055e-9
Identity = 27/43 (62.79%), Postives = 37/43 (86.05%), Query Frame = 2

Query:  146 STLYDLPESCVASIISYMDPPQICQLATLNHAFRAASSADFVW 274
            ++L D+PESCVA+++ Y+DPP+ICQ+A LN AFR A+SAD VW
Sbjct:   17 TSLGDMPESCVAAVLLYLDPPEICQVARLNRAFRGAASADCVW 59

[Close]

BLAST of FE670132 vs. TrEMBL
Match: Q0JAW8_ORYSJ (Os04g0571300 protein OS=Oryza sativa subsp. japonica GN=Os04g0571300 PE=2 SV=1)

HSP 1 Score: 63.929 bits (154), Expect = 5.980e-9
Identity = 26/43 (60.47%), Postives = 37/43 (86.05%), Query Frame = 2

Query:  146 STLYDLPESCVASIISYMDPPQICQLATLNHAFRAASSADFVW 274
            ++L D+PESCVA+++ Y+DPP+IC++A LN AFR A+SAD VW
Sbjct:   21 TSLGDMPESCVAAVLLYLDPPEICKVARLNRAFRGAASADCVW 63

[Close]

BLAST of FE670132 vs. TAIR peptide
Match: AT3G53000.1 (| Symbols: AtPP2-A15, PP2-A15 | phloem protein 2-A15 | chr3:19654278-19655801 FORWARD LENGTH=300)

HSP 1 Score: 63.1586 bits (152), Expect = 3.846e-11
Identity = 30/61 (49.18%), Postives = 38/61 (62.30%), Query Frame = 2

Query:   92 MGISLSCFRPDPTTASSGSTLYDLPESCVASIISYMDPPQICQLATLNHAFRAASSADFVW 274
            MG SLS         + G  L D+PESCVA +  Y+ PP+IC LA LN +FR A+S+D VW
Sbjct:    1 MGSSLSNLNDGTNGLAMGPGLGDIPESCVACVFMYLTPPEICNLAGLNRSFRGAASSDSVW 61

[Close]

BLAST of FE670132 vs. TAIR peptide
Match: AT3G61060.1 (| Symbols: AtPP2-A13, PP2-A13 | phloem protein 2-A13 | chr3:22603166-22604336 FORWARD LENGTH=290)

HSP 1 Score: 62.7734 bits (151), Expect = 5.023e-11
Identity = 27/41 (65.85%), Postives = 34/41 (82.93%), Query Frame = 2

Query:  152 LYDLPESCVASIISYMDPPQICQLATLNHAFRAASSADFVW 274
            L DLPE+CVA I++ +DPP+IC+LA LN  FR ASSADF+W
Sbjct:   25 LVDLPENCVALIMTRLDPPEICRLARLNRMFRRASSADFIW 65

[Close]

BLAST of FE670132 vs. TAIR peptide
Match: AT3G61060.2 (| Symbols: AtPP2-A13, PP2-A13 | phloem protein 2-A13 | chr3:22603166-22604336 FORWARD LENGTH=291)

HSP 1 Score: 62.7734 bits (151), Expect = 5.023e-11
Identity = 27/41 (65.85%), Postives = 34/41 (82.93%), Query Frame = 2

Query:  152 LYDLPESCVASIISYMDPPQICQLATLNHAFRAASSADFVW 274
            L DLPE+CVA I++ +DPP+IC+LA LN  FR ASSADF+W
Sbjct:   25 LVDLPENCVALIMTRLDPPEICRLARLNRMFRRASSADFIW 65

[Close]

BLAST of FE670132 vs. TAIR peptide
Match: AT1G63090.1 (| Symbols: AtPP2-A11, PP2-A11 | phloem protein 2-A11 | chr1:23391283-23392609 REVERSE LENGTH=289)

HSP 1 Score: 54.299 bits (129), Expect = 1.787e-8
Identity = 25/41 (60.98%), Postives = 30/41 (73.17%), Query Frame = 2

Query:  152 LYDLPESCVASIISYMDPPQICQLATLNHAFRAASSADFVW 274
            L DLPESCVA I+  +DP +IC+ + LN AF  AS ADFVW
Sbjct:   26 LGDLPESCVALILQNLDPVEICRFSKLNTAFHGASWADFVW 66

[Close]

BLAST of FE670132 vs. TAIR peptide
Match: AT1G12710.1 (| Symbols: AtPP2-A12, PP2-A12 | phloem protein 2-A12 | chr1:4326980-4328324 REVERSE LENGTH=291)

HSP 1 Score: 53.5286 bits (127), Expect = 3.048e-8
Identity = 30/58 (51.72%), Postives = 36/58 (62.07%), Query Frame = 2

Query:  101 SLSCFRPDPTTASSGSTLYDLPESCVASIISYMDPPQICQLATLNHAFRAASSADFVW 274
            S SCF  D      G  L DLPE+CVA I+  +DP +IC+ + LN AFR AS AD VW
Sbjct:   14 SSSCFG-DRNILKPG--LGDLPEACVAIIVENLDPVEICRFSKLNRAFRGASWADCVW 68

[Close]

BLAST of FE670132 vs. TAIR peptide
Match: AT5G52120.1 (| Symbols: AtPP2-A14, PP2-A14 | phloem protein 2-A14 | chr5:21176661-21180143 REVERSE LENGTH=291)

HSP 1 Score: 51.6026 bits (122), Expect = 1.158e-7
Identity = 20/41 (48.78%), Postives = 30/41 (73.17%), Query Frame = 2

Query:  152 LYDLPESCVASIISYMDPPQICQLATLNHAFRAASSADFVW 274
            L D+PE+C+ ++  YM+PP+IC LA +N +F  AS +D VW
Sbjct:   21 LEDVPENCITAMFMYMEPPEICLLARVNKSFHRASRSDAVW 61

The following BLAST results are available for this feature:

BLAST of FE670132 vs. SwissProt
BLAST of FE670132 vs. TrEMBL
BLAST of FE670132 vs. TAIR peptide

BLAST of FE670132 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 4


Match Name	E-value	Identity	Description
P2A15_ARATH	4.908e-10	49.18	F-box protein PP2-A15 OS=Arabidopsis thaliana GN=P...	[more]
P2A13_ARATH	6.410e-10	65.85	F-box protein PP2-A13 OS=Arabidopsis thaliana GN=P...	[more]
P2A11_ARATH	2.280e-7	60.98	F-box protein PP2-A11 OS=Arabidopsis thaliana GN=P...	[more]
P2A12_ARATH	3.889e-7	51.72	F-box protein PP2-A12 OS=Arabidopsis thaliana GN=P...	[more]

BLAST of FE670132 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
B9SRL8_RICCO	1.859e-10	52.46	ATPP2-A13, putative OS=Ricinus communis GN=RCOM_08...	[more]
D7TW69_VITVI	7.064e-10	52.46	Whole genome shotgun sequence of line PN40024, sca...	[more]
B9IC61_POPTR	9.226e-10	51.56	F-box family protein OS=Populus trichocarpa GN=POP...	[more]
D7LJ54_ARALY	1.205e-9	50.82	Predicted protein OS=Arabidopsis lyrata subsp. lyr...	[more]
B9GKN4_POPTR	1.205e-9	54.55	F-box family protein OS=Populus trichocarpa GN=POP...	[more]
B9R9G0_RICCO	1.574e-9	50.79	ATPP2-A13, putative OS=Ricinus communis GN=RCOM_14...	[more]
Q6EP91_ORYSJ	2.055e-9	62.79	F-box protein-like OS=Oryza sativa subsp. japonica...	[more]
C5Y195_SORBI	2.055e-9	62.79	Putative uncharacterized protein Sb04g032000 OS=So...	[more]
B8AGG5_ORYSI	2.055e-9	62.79	Putative uncharacterized protein OS=Oryza sativa s...	[more]
Q0JAW8_ORYSJ	5.980e-9	60.47	Os04g0571300 protein OS=Oryza sativa subsp. japoni...	[more]

BLAST of FE670132 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 6


Match Name	E-value	Identity	Description
AT3G53000.1	3.846e-11	49.18	\| Symbols: AtPP2-A15, PP2-A15 \| phloem protein 2-A...	[more]
AT3G61060.1	5.023e-11	65.85	\| Symbols: AtPP2-A13, PP2-A13 \| phloem protein 2-A...	[more]
AT3G61060.2	5.023e-11	65.85	\| Symbols: AtPP2-A13, PP2-A13 \| phloem protein 2-A...	[more]
AT1G63090.1	1.787e-8	60.98	\| Symbols: AtPP2-A11, PP2-A11 \| phloem protein 2-A...	[more]
AT1G12710.1	3.048e-8	51.72	\| Symbols: AtPP2-A12, PP2-A12 \| phloem protein 2-A...	[more]
AT5G52120.1	1.158e-7	48.78	\| Symbols: AtPP2-A14, PP2-A14 \| phloem protein 2-A...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001810	F-box domain, cyclin-like	PROFILE	PS50181	FBOX	coord: 45..88 score: 9
IPR022364	F-box domain, Skp2-like	SUPERFAMILY	81383	F-box domain	coord: 38..88 score: 3.7
None	No IPR available	GENE3D	1.20.1280.50	no description	coord: 46..88 score: 9.6
None	No IPR available	SEG	seg	seg	coord: 3..27 score
None	No IPR available	SEG	seg	seg	coord: 8..38 score
None	No IPR available	SEG	seg	seg	coord: 34..59 score

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>FE670132 ID=FE670132; Name=FE670132; organism=Cicer arietinum; type=EST; length=275bp
CTTTTTATGAAACACCTTTCTATCTTCTTTCTCTTTTCTTTTCAATTTCA
GTTTCAATTTCATTTTCATTTTCAGTTTCATTTTCATTTTCATGGGTATT
AGCCTTTCTTGCTTTCGACCAGACCCAACAACCGCTTCTTCCGGTTCCAC
CTTATATGATTTACCGGAAAGTTGCGTCGCTTCCATTATCTCTTACATGG
ATCCTCCTCAGATCTGTCAACTCGCTACCTTGAATCACGCTTTTCGCGCA
GCTTCTTCTGCTGATTTCGTTTGGG

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **INTERPRO**
Term	Definition
IPR001810	F-box_dom
IPR022364	F-box domain, Skp2-like

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