FE672592

EST Overview
NameFE672592
Unique NameFE672592
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length405
Libraries
Library NameType
LIBEST_022820 Drought-stressed chickpea leave librarycdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide2011-02-03
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Homology
[Close]
BLAST of FE672592 vs. TAIR peptide
Match: AT1G80610.1 (| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G15800.1); Has 73 Blast hits to 69 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 2; Plants - 55; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). | chr1:30301204-30303960 REVERSE LENGTH=211)

HSP 1 Score: 51.9878 bits (123), Expect = 1.297e-7
Identity = 30/73 (41.10%), Postives = 39/73 (53.42%), Query Frame = 1 
Query:  199 DWVNFAMADDSIVADXXXXXXXXXXXXXXXXH-----WTVRQRRSRSLPKHAAKPESTRISPTTPLSWNGATS 402
            +W+  AM+DDS+VA+                      W+VRQRRS+       K + TR SPTTPLSW+GATS
Sbjct:    5 NWIRVAMSDDSMVAEALLRLRHSEPKNRVDASPLKLKWSVRQRRSK-------KGDQTRASPTTPLSWSGATS 70
[Close]
BLAST of FE672592 vs. TAIR peptide
Match: AT1G15800.1 (| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G80610.1); Has 56 Blast hits to 52 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 56; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:5441425-5443584 REVERSE LENGTH=207)

HSP 1 Score: 50.0618 bits (118), Expect = 4.929e-7
Identity = 28/77 (36.36%), Postives = 37/77 (48.05%), Query Frame = 1 
Query:  199 DWVNFAMADDSIVADXXXXXXXXXXXXXXXXH---------WTVRQRRSRSLPKHAAKPESTRISPTTPLSWNGATS 402
            DW++ AM DDS+VA+                          W+VRQ R+++          TR SPTTPLSW+GATS
Sbjct:    5 DWIHEAMGDDSLVAEALICLLHAEPSLPETKSGGASDLKLKWSVRQPRTKAATLRKKGDHDTRASPTTPLSWSGATS 81
The following BLAST results are available for this feature:
BLAST of FE672592 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 2
Match NameE-valueIdentityDescription
AT1G80610.11.297e-741.10| Symbols: | unknown protein; BEST Arabidopsis th... [more]
AT1G15800.14.929e-736.36| Symbols: | unknown protein; BEST Arabidopsis th... [more]
back to top
InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 5..14
score: NAcoord: 82..97
score
NoneNo IPR availableSEGsegsegcoord: 5..16
score: NAcoord: 23..40
score
NoneNo IPR availableSEGsegsegcoord: 4..32
score
NoneNo IPR availableSEGsegsegcoord: 22..41
score
NoneNo IPR availableSEGsegsegcoord: 3..25
score: NAcoord: 26..42
score

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>FE672592 ID=FE672592; Name=FE672592; organism=Cicer arietinum; type=EST; length=405bp
GGGCTGCAGGAATTCGAATTCCCCTTCCTCTTCTATTTCTTTCACCTCAC
TCATATGCACCACAAACCTTCTACTCCTCATTCCTATTTTCTTCCTTCAC
TTACTTTTATTCTTTCTTATTTCTTATTATTCAACCTTCCAACCACCACC
ACCGCCACATCTAATCTAATTCAACATCACCAGATGTGTGACCACCACGA
CTGGGTCAACTTCGCCATGGCAGACGATTCCATCGTCGCAGACCTCCTCC
TCCGCCTCAACCGCCGTCAACCACAGCCCTCTCTTCAACTGCACTGGACA
GTTCGTCAGCGACGCTCAAGGTCCCTTCCGAAGCACGCTGCAAAACCTGA
GTCCACCAGAATTAGTCCCACCACCCCGCTTTCCTGGAACGGTGCCACGT
CACCA
back to top