GR393987

EST Overview


Name	GR393987
Unique Name	GR393987
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	258

Libraries


Library Name	Type
LIBEST_024778 ICC1882 field drought stressed root cDNA library	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28

Homology

[Close]

BLAST of GR393987 vs. SwissProt
Match: R35A4_ARATH (60S ribosomal protein L35a-4 OS=Arabidopsis thaliana GN=RPL35AD PE=3 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 1.712e-15
Identity = 36/40 (90.00%), Postives = 38/40 (95.00%), Query Frame = -3

Query:  137 WGKVTRPHGNSGIVRAKFKSTLPPKSMGARVRVFMYPSNI 256
            WGKVTRPHGNSG+VR+KF S LPPKSMGARVRVFMYPSNI
Sbjct:   72 WGKVTRPHGNSGVVRSKFTSNLPPKSMGARVRVFMYPSNI 111

[Close]

BLAST of GR393987 vs. SwissProt
Match: R35A3_ARATH (60S ribosomal protein L35a-3 OS=Arabidopsis thaliana GN=RPL35AC PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 1.712e-15
Identity = 36/40 (90.00%), Postives = 38/40 (95.00%), Query Frame = -3

Query:  137 WGKVTRPHGNSGIVRAKFKSTLPPKSMGARVRVFMYPSNI 256
            WGKVTRPHGNSG+VRAKF S LPPKSMG+RVRVFMYPSNI
Sbjct:   73 WGKVTRPHGNSGVVRAKFTSNLPPKSMGSRVRVFMYPSNI 112

[Close]

BLAST of GR393987 vs. SwissProt
Match: R35A2_ARATH (60S ribosomal protein L35a-2 OS=Arabidopsis thaliana GN=RPL35AB PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 1.712e-15
Identity = 36/40 (90.00%), Postives = 38/40 (95.00%), Query Frame = -3

Query:  137 WGKVTRPHGNSGIVRAKFKSTLPPKSMGARVRVFMYPSNI 256
            WGKVTRPHGNSG+VR+KF S LPPKSMGARVRVFMYPSNI
Sbjct:   72 WGKVTRPHGNSGVVRSKFTSNLPPKSMGARVRVFMYPSNI 111

[Close]

BLAST of GR393987 vs. SwissProt
Match: R35A1_ARATH (60S ribosomal protein L35a-1 OS=Arabidopsis thaliana GN=RPL35AA PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 1.712e-15
Identity = 36/40 (90.00%), Postives = 38/40 (95.00%), Query Frame = -3

Query:  137 WGKVTRPHGNSGIVRAKFKSTLPPKSMGARVRVFMYPSNI 256
            WGKVTRPHGNSG+VRAKF S LPPKSMG+RVRVFMYPSNI
Sbjct:   73 WGKVTRPHGNSGVVRAKFTSNLPPKSMGSRVRVFMYPSNI 112

[Close]

BLAST of GR393987 vs. SwissProt
Match: RL35A_ICTPU (60S ribosomal protein L35a OS=Ictalurus punctatus GN=rpl35a PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 3.342e-11
Identity = 28/40 (70.00%), Postives = 34/40 (85.00%), Query Frame = -3

Query:  137 WGKVTRPHGNSGIVRAKFKSTLPPKSMGARVRVFMYPSNI 256
            WGKVTR HGNSG+VRAKF S LPPK++G R+RV +YPS +
Sbjct:   71 WGKVTRAHGNSGMVRAKFTSNLPPKAIGHRIRVMLYPSRV 110

[Close]

BLAST of GR393987 vs. SwissProt
Match: RL33B_YEAST (60S ribosomal protein L33-B OS=Saccharomyces cerevisiae GN=RPL33B PE=1 SV=2)

HSP 1 Score: 67.0106 bits (162), Expect = 3.342e-11
Identity = 28/40 (70.00%), Postives = 34/40 (85.00%), Query Frame = -3

Query:  137 WGKVTRPHGNSGIVRAKFKSTLPPKSMGARVRVFMYPSNI 256
            WGKVTR HGNSG+VRA F++ LP K+ GA VR+F+YPSNI
Sbjct:   68 WGKVTRTHGNSGVVRATFRNNLPAKTFGASVRIFLYPSNI 107

[Close]

BLAST of GR393987 vs. SwissProt
Match: RL33A_YEAST (60S ribosomal protein L33-A OS=Saccharomyces cerevisiae GN=RPL33A PE=1 SV=3)

HSP 1 Score: 67.0106 bits (162), Expect = 3.342e-11
Identity = 28/40 (70.00%), Postives = 34/40 (85.00%), Query Frame = -3

Query:  137 WGKVTRPHGNSGIVRAKFKSTLPPKSMGARVRVFMYPSNI 256
            WGKVTR HGNSG+VRA F++ LP K+ GA VR+F+YPSNI
Sbjct:   68 WGKVTRTHGNSGVVRATFRNNLPAKTFGASVRIFLYPSNI 107

[Close]

BLAST of GR393987 vs. SwissProt
Match: RL35A_CAEEL (60S ribosomal protein L35a OS=Caenorhabditis elegans GN=rpl-33 PE=1 SV=3)

HSP 1 Score: 66.6254 bits (161), Expect = 4.365e-11
Identity = 26/40 (65.00%), Postives = 33/40 (82.50%), Query Frame = -3

Query:  137 WGKVTRPHGNSGIVRAKFKSTLPPKSMGARVRVFMYPSNI 256
            WGK+TRPHGN+G VRAKF   +PP ++G R+RV +YPSNI
Sbjct:   85 WGKITRPHGNAGAVRAKFHHNIPPSALGKRIRVLLYPSNI 124

[Close]

BLAST of GR393987 vs. SwissProt
Match: RL35A_XENLA (60S ribosomal protein L35a OS=Xenopus laevis GN=rpl35a PE=3 SV=2)

HSP 1 Score: 65.4698 bits (158), Expect = 9.724e-11
Identity = 28/40 (70.00%), Postives = 34/40 (85.00%), Query Frame = -3

Query:  137 WGKVTRPHGNSGIVRAKFKSTLPPKSMGARVRVFMYPSNI 256
            WGKVTR HGNSG+VRAKF+S LP K++G R+RV +YPS I
Sbjct:   71 WGKVTRAHGNSGMVRAKFRSNLPAKAIGHRIRVMLYPSRI 110

[Close]

BLAST of GR393987 vs. SwissProt
Match: RL35A_RAT (60S ribosomal protein L35a OS=Rattus norvegicus GN=Rpl35a PE=3 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 9.724e-11
Identity = 28/40 (70.00%), Postives = 34/40 (85.00%), Query Frame = -3

Query:  137 WGKVTRPHGNSGIVRAKFKSTLPPKSMGARVRVFMYPSNI 256
            WGKVTR HGNSG+VRAKF+S LP K++G R+RV +YPS I
Sbjct:   71 WGKVTRAHGNSGMVRAKFRSNLPAKAIGHRIRVMLYPSRI 110

[Close]

BLAST of GR393987 vs. TrEMBL
Match: C6TBI4_SOYBN (Putative uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 2.472e-15
Identity = 39/40 (97.50%), Postives = 39/40 (97.50%), Query Frame = -3

Query:  137 WGKVTRPHGNSGIVRAKFKSTLPPKSMGARVRVFMYPSNI 256
            WGKVTRPHGNSGIVRAKFKS LPPKSMGARVRVFMYPSNI
Sbjct:   73 WGKVTRPHGNSGIVRAKFKSNLPPKSMGARVRVFMYPSNI 112

[Close]

BLAST of GR393987 vs. TrEMBL
Match: B7FH49_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=4 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 2.472e-15
Identity = 39/40 (97.50%), Postives = 39/40 (97.50%), Query Frame = -3

Query:  137 WGKVTRPHGNSGIVRAKFKSTLPPKSMGARVRVFMYPSNI 256
            WGKVTRPHGNSGIVRAKFKS LPPKSMGARVRVFMYPSNI
Sbjct:   73 WGKVTRPHGNSGIVRAKFKSNLPPKSMGARVRVFMYPSNI 112

[Close]

BLAST of GR393987 vs. TrEMBL
Match: B7FGS2_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=4 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 2.472e-15
Identity = 39/40 (97.50%), Postives = 39/40 (97.50%), Query Frame = -3

Query:  137 WGKVTRPHGNSGIVRAKFKSTLPPKSMGARVRVFMYPSNI 256
            WGKVTRPHGNSGIVRAKFKS LPPKSMGARVRVFMYPSNI
Sbjct:   73 WGKVTRPHGNSGIVRAKFKSNLPPKSMGARVRVFMYPSNI 112

[Close]

BLAST of GR393987 vs. TrEMBL
Match: B6VC50_VERFO (60S ribosomal protein L35a OS=Vernicia fordii GN=RPL35A PE=4 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 3.229e-15
Identity = 38/40 (95.00%), Postives = 39/40 (97.50%), Query Frame = -3

Query:  137 WGKVTRPHGNSGIVRAKFKSTLPPKSMGARVRVFMYPSNI 256
            WGKVTRPHGNSG+VRAKFKS LPPKSMGARVRVFMYPSNI
Sbjct:   73 WGKVTRPHGNSGVVRAKFKSNLPPKSMGARVRVFMYPSNI 112

[Close]

BLAST of GR393987 vs. TrEMBL
Match: A9PB30_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_820384 PE=4 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 3.229e-15
Identity = 38/40 (95.00%), Postives = 39/40 (97.50%), Query Frame = -3

Query:  137 WGKVTRPHGNSGIVRAKFKSTLPPKSMGARVRVFMYPSNI 256
            WGKVTRPHGNSG+VRAKFKS LPPKSMGARVRVFMYPSNI
Sbjct:   73 WGKVTRPHGNSGVVRAKFKSNLPPKSMGARVRVFMYPSNI 112

[Close]

BLAST of GR393987 vs. TrEMBL
Match: A9P9L2_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_833785 PE=4 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 3.229e-15
Identity = 38/40 (95.00%), Postives = 39/40 (97.50%), Query Frame = -3

Query:  137 WGKVTRPHGNSGIVRAKFKSTLPPKSMGARVRVFMYPSNI 256
            WGKVTRPHGNSG+VRAKFKS LPPKSMGARVRVFMYPSNI
Sbjct:   73 WGKVTRPHGNSGVVRAKFKSNLPPKSMGARVRVFMYPSNI 112

[Close]

BLAST of GR393987 vs. TrEMBL
Match: A5C3V1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_014336 PE=4 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 3.229e-15
Identity = 38/40 (95.00%), Postives = 39/40 (97.50%), Query Frame = -3

Query:  137 WGKVTRPHGNSGIVRAKFKSTLPPKSMGARVRVFMYPSNI 256
            WGKVTRPHGNSG+VRAKFKS LPPKSMGARVRVFMYPSNI
Sbjct:   73 WGKVTRPHGNSGVVRAKFKSNLPPKSMGARVRVFMYPSNI 112

[Close]

BLAST of GR393987 vs. TrEMBL
Match: C6SXI3_SOYBN (Putative uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 5.507e-15
Identity = 38/40 (95.00%), Postives = 39/40 (97.50%), Query Frame = -3

Query:  137 WGKVTRPHGNSGIVRAKFKSTLPPKSMGARVRVFMYPSNI 256
            WGKVTRPHGNSGIVRAKFKS LPP+SMGARVRVFMYPSNI
Sbjct:   73 WGKVTRPHGNSGIVRAKFKSNLPPRSMGARVRVFMYPSNI 112

[Close]

BLAST of GR393987 vs. TrEMBL
Match: C6SW44_SOYBN (Putative uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 5.507e-15
Identity = 38/40 (95.00%), Postives = 39/40 (97.50%), Query Frame = -3

Query:  137 WGKVTRPHGNSGIVRAKFKSTLPPKSMGARVRVFMYPSNI 256
            WGKVTRPHGNSGIVRAKFKS LPP+SMGARVRVFMYPSNI
Sbjct:   73 WGKVTRPHGNSGIVRAKFKSNLPPRSMGARVRVFMYPSNI 112

[Close]

BLAST of GR393987 vs. TrEMBL
Match: C6SXC3_SOYBN (Putative uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 7.192e-15
Identity = 37/40 (92.50%), Postives = 39/40 (97.50%), Query Frame = -3

Query:  137 WGKVTRPHGNSGIVRAKFKSTLPPKSMGARVRVFMYPSNI 256
            WGKVTRPHGNSG+VRAKFKS LPP+SMGARVRVFMYPSNI
Sbjct:   73 WGKVTRPHGNSGVVRAKFKSNLPPRSMGARVRVFMYPSNI 112

[Close]

BLAST of GR393987 vs. TAIR peptide
Match: AT3G55750.1 (| Symbols: | Ribosomal protein L35Ae family protein | chr3:20698641-20699553 FORWARD LENGTH=111)

HSP 1 Score: 81.2629 bits (199), Expect = 1.388e-16
Identity = 36/40 (90.00%), Postives = 38/40 (95.00%), Query Frame = -3

Query:  137 WGKVTRPHGNSGIVRAKFKSTLPPKSMGARVRVFMYPSNI 256
            WGKVTRPHGNSG+VR+KF S LPPKSMGARVRVFMYPSNI
Sbjct:   72 WGKVTRPHGNSGVVRSKFTSNLPPKSMGARVRVFMYPSNI 111

[Close]

BLAST of GR393987 vs. TAIR peptide
Match: AT1G74270.1 (| Symbols: | Ribosomal protein L35Ae family protein | chr1:27928415-27929466 REVERSE LENGTH=112)

HSP 1 Score: 81.2629 bits (199), Expect = 1.388e-16
Identity = 36/40 (90.00%), Postives = 38/40 (95.00%), Query Frame = -3

Query:  137 WGKVTRPHGNSGIVRAKFKSTLPPKSMGARVRVFMYPSNI 256
            WGKVTRPHGNSG+VRAKF S LPPKSMG+RVRVFMYPSNI
Sbjct:   73 WGKVTRPHGNSGVVRAKFTSNLPPKSMGSRVRVFMYPSNI 112

[Close]

BLAST of GR393987 vs. TAIR peptide
Match: AT1G07070.1 (| Symbols: | Ribosomal protein L35Ae family protein | chr1:2168652-2169703 FORWARD LENGTH=112)

HSP 1 Score: 81.2629 bits (199), Expect = 1.388e-16
Identity = 36/40 (90.00%), Postives = 38/40 (95.00%), Query Frame = -3

Query:  137 WGKVTRPHGNSGIVRAKFKSTLPPKSMGARVRVFMYPSNI 256
            WGKVTRPHGNSG+VRAKF S LPPKSMG+RVRVFMYPSNI
Sbjct:   73 WGKVTRPHGNSGVVRAKFTSNLPPKSMGSRVRVFMYPSNI 112

[Close]

BLAST of GR393987 vs. TAIR peptide
Match: AT1G41880.1 (| Symbols: | Ribosomal protein L35Ae family protein | chr1:15651585-15652427 REVERSE LENGTH=111)

HSP 1 Score: 81.2629 bits (199), Expect = 1.388e-16
Identity = 36/40 (90.00%), Postives = 38/40 (95.00%), Query Frame = -3

Query:  137 WGKVTRPHGNSGIVRAKFKSTLPPKSMGARVRVFMYPSNI 256
            WGKVTRPHGNSG+VR+KF S LPPKSMGARVRVFMYPSNI
Sbjct:   72 WGKVTRPHGNSGVVRSKFTSNLPPKSMGARVRVFMYPSNI 111

The following BLAST results are available for this feature:

BLAST of GR393987 vs. SwissProt
BLAST of GR393987 vs. TrEMBL
BLAST of GR393987 vs. TAIR peptide

BLAST of GR393987 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
R35A4_ARATH	1.712e-15	90.00	60S ribosomal protein L35a-4 OS=Arabidopsis thalia...	[more]
R35A3_ARATH	1.712e-15	90.00	60S ribosomal protein L35a-3 OS=Arabidopsis thalia...	[more]
R35A2_ARATH	1.712e-15	90.00	60S ribosomal protein L35a-2 OS=Arabidopsis thalia...	[more]
R35A1_ARATH	1.712e-15	90.00	60S ribosomal protein L35a-1 OS=Arabidopsis thalia...	[more]
RL35A_ICTPU	3.342e-11	70.00	60S ribosomal protein L35a OS=Ictalurus punctatus ...	[more]
RL33B_YEAST	3.342e-11	70.00	60S ribosomal protein L33-B OS=Saccharomyces cerev...	[more]
RL33A_YEAST	3.342e-11	70.00	60S ribosomal protein L33-A OS=Saccharomyces cerev...	[more]
RL35A_CAEEL	4.365e-11	65.00	60S ribosomal protein L35a OS=Caenorhabditis elega...	[more]
RL35A_XENLA	9.724e-11	70.00	60S ribosomal protein L35a OS=Xenopus laevis GN=rp...	[more]
RL35A_RAT	9.724e-11	70.00	60S ribosomal protein L35a OS=Rattus norvegicus GN...	[more]

BLAST of GR393987 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
C6TBI4_SOYBN	2.472e-15	97.50	Putative uncharacterized protein OS=Glycine max PE...	[more]
B7FH49_MEDTR	2.472e-15	97.50	Putative uncharacterized protein OS=Medicago trunc...	[more]
B7FGS2_MEDTR	2.472e-15	97.50	Putative uncharacterized protein OS=Medicago trunc...	[more]
B6VC50_VERFO	3.229e-15	95.00	60S ribosomal protein L35a OS=Vernicia fordii GN=R...	[more]
A9PB30_POPTR	3.229e-15	95.00	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
A9P9L2_POPTR	3.229e-15	95.00	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
A5C3V1_VITVI	3.229e-15	95.00	Putative uncharacterized protein OS=Vitis vinifera...	[more]
C6SXI3_SOYBN	5.507e-15	95.00	Putative uncharacterized protein OS=Glycine max PE...	[more]
C6SW44_SOYBN	5.507e-15	95.00	Putative uncharacterized protein OS=Glycine max PE...	[more]
C6SXC3_SOYBN	7.192e-15	92.50	Putative uncharacterized protein OS=Glycine max PE...	[more]

BLAST of GR393987 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 4


Match Name	E-value	Identity	Description
AT3G55750.1	1.388e-16	90.00	\| Symbols: \| Ribosomal protein L35Ae family prote...	[more]
AT1G74270.1	1.388e-16	90.00	\| Symbols: \| Ribosomal protein L35Ae family prote...	[more]
AT1G07070.1	1.388e-16	90.00	\| Symbols: \| Ribosomal protein L35Ae family prote...	[more]
AT1G41880.1	1.388e-16	90.00	\| Symbols: \| Ribosomal protein L35Ae family prote...	[more]

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>GR393987 ID=GR393987; Name=GR393987; organism=Cicer arietinum; type=EST; length=258bp
AAAAAACAGAGGATAACTAATACATGTTCTTTCACCATGCAGGAAAAGGA
ACTATTCTGTTTAAAGATACAAAAATGATCAAAAATATAACTTCCATAGT
GCATTTGTCTTCTAGTCCAAGGGTCGGATCACCTTATATGTTGCTTGGAT
ACATGAAAACTCTAACCCTGGCTCCCATTGATTTTGGGGGAAGGGTTGAC
TTGAACTTTGCACGGACTATGCCACTGTTACCATGAGGCCTTGTAACCTT
ACCCCAAA

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