GR394681
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GR394681 vs. TrEMBL
Match: B9SR90_RICCO (Nnp-1 protein, putative OS=Ricinus communis GN=RCOM_0112320 PE=4 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 1.380e-36 Identity = 87/152 (57.24%), Postives = 98/152 (64.47%), Query Frame = 3 Query: 3 ISNLQKQFEKVAAEAGLDDSVASVCVTPEATGIVXXXXXXXXXXXXXXXXXQDFVLNGG-GADESAVAKSGEKSSKKVRFSMKNNLVWKPHSPLPPQSVRIPPSVTPRGSALKKGVPPGPVREMPLQAKKMK-----AKKGRRTIIGGVPSV 440 ISNLQ QFEKVAAE GLD +V S C TG ++ L AD A KS EKS+KKVRFSMKNNLVWKPHSPLPPQS+RIPPSVTPRGSALKKG+PPGP+REMP+ KK K KKGR+ + G VP + Sbjct: 389 ISNLQMQFEKVAAEVGLDKNVESACDIINVTGNGVVTKKRKRSKSKESQQPENTELTDEVNADGGATGKSTEKSAKKVRFSMKNNLVWKPHSPLPPQSLRIPPSVTPRGSALKKGIPPGPIREMPVATKKAKHKTKSLKKGRKVLSGLVPVI 540
BLAST of GR394681 vs. TrEMBL
Match: B9I4Z2_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_806222 PE=4 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 1.168e-35 Identity = 80/146 (54.79%), Postives = 98/146 (67.12%), Query Frame = 3 Query: 3 ISNLQKQFEKVAAEAGLDDSVASVCVTPEATGIVXXXXXXXXXXXXXXXXXQDFVLNGGGADE---SAVAKSGEKSSKKVRFSMKNNLVWKPHSPLPPQSVRIPPSVTPRGSALKKGVPPGPVREMPLQAKKMKAKKGRRTIIGGV 431 I+NLQ+QFEKVAAE G+D+ V SVC P+ TG ++ NG DE S +AKS EKS+KKVRFSMKNNL+WKP +PLPPQS+RIPPSVTPRGSALKKG+PPGPVREMP + + K + +I G+ Sbjct: 385 IANLQRQFEKVAAEVGIDEGVTSVCDFPKVTGNGNLSKKRKRAKRVELKQSENQESNGQEDDEAGTSTMAKSTEKSAKKVRFSMKNNLIWKPSTPLPPQSLRIPPSVTPRGSALKKGIPPGPVREMPAKKNMKQRAKSMKKVIKGI 530
BLAST of GR394681 vs. TrEMBL
Match: A5C227_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_016489 PE=4 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 1.336e-31 Identity = 82/151 (54.30%), Postives = 99/151 (65.56%), Query Frame = 3 Query: 3 ISNLQKQFEKVAAEAGLDDSVASVCVTPEATGIVXXXXXXXXXXXXXXXXXQDFVLNGGGADESAVAKSGEKSSKKVRFSMKNNLVWKPHSPLPPQSVRIPPSVTPRGSALKKGVPPGPVREMPLQAKKMK-----AKKGRRTIIGGVPSV 440 ISNLQ QFEKVAAE GL + + +C +P T +V V + G + SA+AKS KS+KKV+FS+KNNLVWKP SPLPPQS+R+PPSVTPRGSALKKG+PPGPVREMP Q KK+K KKGR I P++ Sbjct: 391 ISNLQMQFEKVAAEVGLGNELMGLCDSP--TRLVNGTVSKKRKRAKNNNEHD--VSSQGDDESSALAKSKGKSAKKVKFSIKNNLVWKPQSPLPPQSLRLPPSVTPRGSALKKGIPPGPVREMP-QTKKVKKRAKSLKKGRNGIKSISPAI 536
BLAST of GR394681 vs. TrEMBL
Match: B4FQZ4_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 8.107e-29 Identity = 68/138 (49.28%), Postives = 87/138 (63.04%), Query Frame = 3 Query: 6 SNLQKQFEKVAAEAGLDDSVASVCVTPEATGIVXXXXXXXXXXXXXXXXXQDFVLNGGGADESAVAKSGEKSSKKVRFSMKNNLVWKPHSPLPPQSVRIPPSVTPRGSALKKGVPPGPVREMPLQAKKMKAKKGRRTI 419 SNLQKQFE VAAEAG+ + +S +P V + GG++ + +A+ GEKS KKVRFSMKNNLVW+PH+PLPPQ +R+PPS TPRGSALKKGV PGP+ PL+ K KAK ++ + Sbjct: 396 SNLQKQFEMVAAEAGMAEGGSSSSDSPVTP--VTGKVATKRKRSKSADKLSEASAGDGGSEGNLLAQDGEKSGKKVRFSMKNNLVWRPHNPLPPQCLRLPPSATPRGSALKKGVQPGPITPTPLKKAKPKAKSAKKVL 531
BLAST of GR394681 vs. TrEMBL
Match: B6U1R2_MAIZE (Nucleolar protein,Nop52 containing protein OS=Zea mays PE=2 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 1.383e-28 Identity = 70/140 (50.00%), Postives = 88/140 (62.86%), Query Frame = 3 Query: 6 SNLQKQFEKVAAEAGLDDSVASVCVTP--EATGIVXXXXXXXXXXXXXXXXXQDFVLNGGGADESAVAKSGEKSSKKVRFSMKNNLVWKPHSPLPPQSVRIPPSVTPRGSALKKGVPPGPVREMPLQAKKMKAKKGRRTI 419 SNLQKQFE VAAEAG+ + +S +P TG V GG++ + +A+ GEKS KKVRFSMKNNLVW+PH+PLPPQ +R+PPS TPRGSALKKGV PGP+ PL+ K KAK ++ + Sbjct: 397 SNLQKQFEMVAAEAGMAEGGSSSSDSPVTPVTGKVATKRKRSKSADKLSEASD----GDGGSEGNLLAQDGEKSGKKVRFSMKNNLVWRPHNPLPPQCLRLPPSATPRGSALKKGVQPGPITPTPLKKAKPKAKSAKKVL 532
BLAST of GR394681 vs. TrEMBL
Match: Q01HZ2_ORYSA (OSIGBa0132E09-OSIGBa0108L24.7 protein OS=Oryza sativa GN=OSIGBa0132E09-OSIGBa0108L24.7 PE=4 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 3.081e-28 Identity = 70/133 (52.63%), Postives = 86/133 (64.66%), Query Frame = 3 Query: 3 ISNLQKQFEKVAAEAGLDDSVASVCVTPEATGIVXXXXXXXXXXXXXXXXXQDFVLNGGGADESAVAKSGEKSSKKVRFSMKNNLVWKPHSPLPPQSVRIPPSVTPRGSALKKGVPPGPVREMPLQAKKMKAK 401 +SNLQKQFEK AAEAG+ + +S +P A+G D V + G + +++ GEKS KKVRFSMKNNLVWKPH+PLPPQ +R+PPS TPRGSALKKGV PGP++E P KK K K Sbjct: 405 MSNLQKQFEKAAAEAGMVNGGSSSSASP-ASGKAAKKRKRAKSADRLSVSDGDDVSSEG----TIISQDGEKSGKKVRFSMKNNLVWKPHNPLPPQCLRLPPSATPRGSALKKGVLPGPIKETPTPVKKTKPK 532
BLAST of GR394681 vs. TrEMBL
Match: C0P5J3_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 3.081e-28 Identity = 68/138 (49.28%), Postives = 85/138 (61.59%), Query Frame = 3 Query: 6 SNLQKQFEKVAAEAGLDDSVASVCVTPEATGIVXXXXXXXXXXXXXXXXXQDFVLNGGGADESAVAKSGEKSSKKVRFSMKNNLVWKPHSPLPPQSVRIPPSVTPRGSALKKGVPPGPVREMPLQAKKMKAKKGRRTI 419 SNLQKQFE AAEAG+ +S +P V + G G++ + +A+ GEKS KKVRFSMKNNLVWKPH+PLPPQ +R+PPS TPRGSALKKGV PGP+ PL+ K KAK ++ + Sbjct: 407 SNLQKQFEMAAAEAGMVKGGSSSSASPVTP--VSGKVATKRKRSKSADKLSEASDGGDGSEGNLLAQDGEKSGKKVRFSMKNNLVWKPHNPLPPQCLRLPPSATPRGSALKKGVKPGPITPTPLRKAKPKAKSAKKVL 542
BLAST of GR394681 vs. TrEMBL
Match: A2XYH9_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_17752 PE=4 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 3.081e-28 Identity = 70/133 (52.63%), Postives = 86/133 (64.66%), Query Frame = 3 Query: 3 ISNLQKQFEKVAAEAGLDDSVASVCVTPEATGIVXXXXXXXXXXXXXXXXXQDFVLNGGGADESAVAKSGEKSSKKVRFSMKNNLVWKPHSPLPPQSVRIPPSVTPRGSALKKGVPPGPVREMPLQAKKMKAK 401 +SNLQKQFEK AAEAG+ + +S +P A+G D V + G + +++ GEKS KKVRFSMKNNLVWKPH+PLPPQ +R+PPS TPRGSALKKGV PGP++E P KK K K Sbjct: 404 MSNLQKQFEKAAAEAGMVNGGSSSSASP-ASGKAAKKRKRAKSADRLSVSDGDDVSSEG----TIISQDGEKSGKKVRFSMKNNLVWKPHNPLPPQCLRLPPSATPRGSALKKGVLPGPIKETPTPVKKTKPK 531
BLAST of GR394681 vs. TrEMBL
Match: Q8S3P9_ORYSJ (OSJNBa0011F23.10 protein OS=Oryza sativa subsp. japonica GN=24K23.8 PE=4 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 5.255e-28 Identity = 70/133 (52.63%), Postives = 85/133 (63.91%), Query Frame = 3 Query: 3 ISNLQKQFEKVAAEAGLDDSVASVCVTPEATGIVXXXXXXXXXXXXXXXXXQDFVLNGGGADESAVAKSGEKSSKKVRFSMKNNLVWKPHSPLPPQSVRIPPSVTPRGSALKKGVPPGPVREMPLQAKKMKAK 401 +SNLQKQFEK AAEAG+ + +S P A+G D V + G + +++ GEKS KKVRFSMKNNLVWKPH+PLPPQ +R+PPS TPRGSALKKGV PGP++E P KK K K Sbjct: 405 MSNLQKQFEKAAAEAGMVNGGSSSSALP-ASGKAAKKRKRAKSADRLSVSDGDDVSSEG----TIISQDGEKSGKKVRFSMKNNLVWKPHNPLPPQCLRLPPSATPRGSALKKGVLPGPIKETPTPVKKTKPK 532
BLAST of GR394681 vs. TrEMBL
Match: Q0J9E4_ORYSJ (Os04g0658600 protein (Fragment) OS=Oryza sativa subsp. japonica GN=Os04g0658600 PE=4 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 5.255e-28 Identity = 70/133 (52.63%), Postives = 85/133 (63.91%), Query Frame = 3 Query: 3 ISNLQKQFEKVAAEAGLDDSVASVCVTPEATGIVXXXXXXXXXXXXXXXXXQDFVLNGGGADESAVAKSGEKSSKKVRFSMKNNLVWKPHSPLPPQSVRIPPSVTPRGSALKKGVPPGPVREMPLQAKKMKAK 401 +SNLQKQFEK AAEAG+ + +S P A+G D V + G + +++ GEKS KKVRFSMKNNLVWKPH+PLPPQ +R+PPS TPRGSALKKGV PGP++E P KK K K Sbjct: 397 MSNLQKQFEKAAAEAGMVNGGSSSSALP-ASGKAAKKRKRAKSADRLSVSDGDDVSSEG----TIISQDGEKSGKKVRFSMKNNLVWKPHNPLPPQCLRLPPSATPRGSALKKGVLPGPIKETPTPVKKTKPK 524
BLAST of GR394681 vs. TAIR peptide
Match: AT5G20600.1 (| Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: rRNA processing; LOCATED IN: preribosome, small subunit precursor; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleolar, Nop52 (InterPro:IPR010301); Has 543 Blast hits to 530 proteins in 201 species: Archae - 0; Bacteria - 10; Metazoa - 211; Fungi - 164; Plants - 46; Viruses - 0; Other Eukaryotes - 112 (source: NCBI BLink). | chr5:6966345-6967943 REVERSE LENGTH=532) HSP 1 Score: 120.168 bits (300), Expect = 1.014e-27 Identity = 69/147 (46.94%), Postives = 86/147 (58.50%), Query Frame = 3 Query: 3 ISNLQKQFEKVAAEAGLDDS-VASVCVTPEATGIVXXXXXXXXXXXXXXXXXQDFVLNGGGADESAVAKSGEKSSKKVRFSMKNNLVWKPHSPLPPQSVRIPPSVTPRGSALKKGVPPGPVREMPLQAKKMKAKKGRRTIIGGVPSV 440 IS+L+++FEK+A+E S VASVC E + Q +N A+ S S EKSSK+VRF+MKNNLVWKPH PLPPQ +R PPS TPRGSALK+G+P GPVRE+ + K K K R GV S+ Sbjct: 383 ISDLRQEFEKIASEMSPSKSEVASVCDVAEPVSV---SKKTKKRKRENKGEEQVSTVNRDAAETSLAGPSSEKSSKRVRFAMKNNLVWKPHCPLPPQDLRCPPSATPRGSALKQGIPAGPVRELASRKTKKKVKPAARR---GVKSI 523 The following BLAST results are available for this feature:
BLAST of GR394681 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl) Total hits: 10
BLAST of GR394681 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide) Total hits: 1
InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GR394681 ID=GR394681; Name=GR394681; organism=Cicer arietinum; type=EST; length=659bpback to top Annotated Terms
The
following terms have been associated with
this EST:
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