GR394681

EST Overview
NameGR394681
Unique NameGR394681
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length659
Libraries
Library NameType
LIBEST_024779 ICC1882 Slow drought stressed root cDNA librarycdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Homology
BLAST of GR394681 vs. TrEMBL
Match: B9SR90_RICCO (Nnp-1 protein, putative OS=Ricinus communis GN=RCOM_0112320 PE=4 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.380e-36
Identity = 87/152 (57.24%), Postives = 98/152 (64.47%), Query Frame = 3
Query:    3 ISNLQKQFEKVAAEAGLDDSVASVCVTPEATGIVXXXXXXXXXXXXXXXXXQDFVLNGG-GADESAVAKSGEKSSKKVRFSMKNNLVWKPHSPLPPQSVRIPPSVTPRGSALKKGVPPGPVREMPLQAKKMK-----AKKGRRTIIGGVPSV 440
            ISNLQ QFEKVAAE GLD +V S C     TG                   ++  L     AD  A  KS EKS+KKVRFSMKNNLVWKPHSPLPPQS+RIPPSVTPRGSALKKG+PPGP+REMP+  KK K      KKGR+ + G VP +
Sbjct:  389 ISNLQMQFEKVAAEVGLDKNVESACDIINVTGNGVVTKKRKRSKSKESQQPENTELTDEVNADGGATGKSTEKSAKKVRFSMKNNLVWKPHSPLPPQSLRIPPSVTPRGSALKKGIPPGPIREMPVATKKAKHKTKSLKKGRKVLSGLVPVI 540          
BLAST of GR394681 vs. TrEMBL
Match: B9I4Z2_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_806222 PE=4 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 1.168e-35
Identity = 80/146 (54.79%), Postives = 98/146 (67.12%), Query Frame = 3
Query:    3 ISNLQKQFEKVAAEAGLDDSVASVCVTPEATGIVXXXXXXXXXXXXXXXXXQDFVLNGGGADE---SAVAKSGEKSSKKVRFSMKNNLVWKPHSPLPPQSVRIPPSVTPRGSALKKGVPPGPVREMPLQAKKMKAKKGRRTIIGGV 431
            I+NLQ+QFEKVAAE G+D+ V SVC  P+ TG                   ++   NG   DE   S +AKS EKS+KKVRFSMKNNL+WKP +PLPPQS+RIPPSVTPRGSALKKG+PPGPVREMP +    +  K  + +I G+
Sbjct:  385 IANLQRQFEKVAAEVGIDEGVTSVCDFPKVTGNGNLSKKRKRAKRVELKQSENQESNGQEDDEAGTSTMAKSTEKSAKKVRFSMKNNLIWKPSTPLPPQSLRIPPSVTPRGSALKKGIPPGPVREMPAKKNMKQRAKSMKKVIKGI 530          
BLAST of GR394681 vs. TrEMBL
Match: A5C227_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_016489 PE=4 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.336e-31
Identity = 82/151 (54.30%), Postives = 99/151 (65.56%), Query Frame = 3
Query:    3 ISNLQKQFEKVAAEAGLDDSVASVCVTPEATGIVXXXXXXXXXXXXXXXXXQDFVLNGGGADESAVAKSGEKSSKKVRFSMKNNLVWKPHSPLPPQSVRIPPSVTPRGSALKKGVPPGPVREMPLQAKKMK-----AKKGRRTIIGGVPSV 440
            ISNLQ QFEKVAAE GL + +  +C +P  T +V                    V + G  + SA+AKS  KS+KKV+FS+KNNLVWKP SPLPPQS+R+PPSVTPRGSALKKG+PPGPVREMP Q KK+K      KKGR  I    P++
Sbjct:  391 ISNLQMQFEKVAAEVGLGNELMGLCDSP--TRLVNGTVSKKRKRAKNNNEHD--VSSQGDDESSALAKSKGKSAKKVKFSIKNNLVWKPQSPLPPQSLRLPPSVTPRGSALKKGIPPGPVREMP-QTKKVKKRAKSLKKGRNGIKSISPAI 536          
BLAST of GR394681 vs. TrEMBL
Match: B4FQZ4_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 8.107e-29
Identity = 68/138 (49.28%), Postives = 87/138 (63.04%), Query Frame = 3
Query:    6 SNLQKQFEKVAAEAGLDDSVASVCVTPEATGIVXXXXXXXXXXXXXXXXXQDFVLNGGGADESAVAKSGEKSSKKVRFSMKNNLVWKPHSPLPPQSVRIPPSVTPRGSALKKGVPPGPVREMPLQAKKMKAKKGRRTI 419
            SNLQKQFE VAAEAG+ +  +S   +P     V                  +     GG++ + +A+ GEKS KKVRFSMKNNLVW+PH+PLPPQ +R+PPS TPRGSALKKGV PGP+   PL+  K KAK  ++ +
Sbjct:  396 SNLQKQFEMVAAEAGMAEGGSSSSDSPVTP--VTGKVATKRKRSKSADKLSEASAGDGGSEGNLLAQDGEKSGKKVRFSMKNNLVWRPHNPLPPQCLRLPPSATPRGSALKKGVQPGPITPTPLKKAKPKAKSAKKVL 531          
BLAST of GR394681 vs. TrEMBL
Match: B6U1R2_MAIZE (Nucleolar protein,Nop52 containing protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.383e-28
Identity = 70/140 (50.00%), Postives = 88/140 (62.86%), Query Frame = 3
Query:    6 SNLQKQFEKVAAEAGLDDSVASVCVTP--EATGIVXXXXXXXXXXXXXXXXXQDFVLNGGGADESAVAKSGEKSSKKVRFSMKNNLVWKPHSPLPPQSVRIPPSVTPRGSALKKGVPPGPVREMPLQAKKMKAKKGRRTI 419
            SNLQKQFE VAAEAG+ +  +S   +P    TG V                        GG++ + +A+ GEKS KKVRFSMKNNLVW+PH+PLPPQ +R+PPS TPRGSALKKGV PGP+   PL+  K KAK  ++ +
Sbjct:  397 SNLQKQFEMVAAEAGMAEGGSSSSDSPVTPVTGKVATKRKRSKSADKLSEASD----GDGGSEGNLLAQDGEKSGKKVRFSMKNNLVWRPHNPLPPQCLRLPPSATPRGSALKKGVQPGPITPTPLKKAKPKAKSAKKVL 532          
BLAST of GR394681 vs. TrEMBL
Match: Q01HZ2_ORYSA (OSIGBa0132E09-OSIGBa0108L24.7 protein OS=Oryza sativa GN=OSIGBa0132E09-OSIGBa0108L24.7 PE=4 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 3.081e-28
Identity = 70/133 (52.63%), Postives = 86/133 (64.66%), Query Frame = 3
Query:    3 ISNLQKQFEKVAAEAGLDDSVASVCVTPEATGIVXXXXXXXXXXXXXXXXXQDFVLNGGGADESAVAKSGEKSSKKVRFSMKNNLVWKPHSPLPPQSVRIPPSVTPRGSALKKGVPPGPVREMPLQAKKMKAK 401
            +SNLQKQFEK AAEAG+ +  +S   +P A+G                    D V + G    + +++ GEKS KKVRFSMKNNLVWKPH+PLPPQ +R+PPS TPRGSALKKGV PGP++E P   KK K K
Sbjct:  405 MSNLQKQFEKAAAEAGMVNGGSSSSASP-ASGKAAKKRKRAKSADRLSVSDGDDVSSEG----TIISQDGEKSGKKVRFSMKNNLVWKPHNPLPPQCLRLPPSATPRGSALKKGVLPGPIKETPTPVKKTKPK 532          
BLAST of GR394681 vs. TrEMBL
Match: C0P5J3_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 3.081e-28
Identity = 68/138 (49.28%), Postives = 85/138 (61.59%), Query Frame = 3
Query:    6 SNLQKQFEKVAAEAGLDDSVASVCVTPEATGIVXXXXXXXXXXXXXXXXXQDFVLNGGGADESAVAKSGEKSSKKVRFSMKNNLVWKPHSPLPPQSVRIPPSVTPRGSALKKGVPPGPVREMPLQAKKMKAKKGRRTI 419
            SNLQKQFE  AAEAG+    +S   +P     V                  +    G G++ + +A+ GEKS KKVRFSMKNNLVWKPH+PLPPQ +R+PPS TPRGSALKKGV PGP+   PL+  K KAK  ++ +
Sbjct:  407 SNLQKQFEMAAAEAGMVKGGSSSSASPVTP--VSGKVATKRKRSKSADKLSEASDGGDGSEGNLLAQDGEKSGKKVRFSMKNNLVWKPHNPLPPQCLRLPPSATPRGSALKKGVKPGPITPTPLRKAKPKAKSAKKVL 542          
BLAST of GR394681 vs. TrEMBL
Match: A2XYH9_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_17752 PE=4 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 3.081e-28
Identity = 70/133 (52.63%), Postives = 86/133 (64.66%), Query Frame = 3
Query:    3 ISNLQKQFEKVAAEAGLDDSVASVCVTPEATGIVXXXXXXXXXXXXXXXXXQDFVLNGGGADESAVAKSGEKSSKKVRFSMKNNLVWKPHSPLPPQSVRIPPSVTPRGSALKKGVPPGPVREMPLQAKKMKAK 401
            +SNLQKQFEK AAEAG+ +  +S   +P A+G                    D V + G    + +++ GEKS KKVRFSMKNNLVWKPH+PLPPQ +R+PPS TPRGSALKKGV PGP++E P   KK K K
Sbjct:  404 MSNLQKQFEKAAAEAGMVNGGSSSSASP-ASGKAAKKRKRAKSADRLSVSDGDDVSSEG----TIISQDGEKSGKKVRFSMKNNLVWKPHNPLPPQCLRLPPSATPRGSALKKGVLPGPIKETPTPVKKTKPK 531          
BLAST of GR394681 vs. TrEMBL
Match: Q8S3P9_ORYSJ (OSJNBa0011F23.10 protein OS=Oryza sativa subsp. japonica GN=24K23.8 PE=4 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 5.255e-28
Identity = 70/133 (52.63%), Postives = 85/133 (63.91%), Query Frame = 3
Query:    3 ISNLQKQFEKVAAEAGLDDSVASVCVTPEATGIVXXXXXXXXXXXXXXXXXQDFVLNGGGADESAVAKSGEKSSKKVRFSMKNNLVWKPHSPLPPQSVRIPPSVTPRGSALKKGVPPGPVREMPLQAKKMKAK 401
            +SNLQKQFEK AAEAG+ +  +S    P A+G                    D V + G    + +++ GEKS KKVRFSMKNNLVWKPH+PLPPQ +R+PPS TPRGSALKKGV PGP++E P   KK K K
Sbjct:  405 MSNLQKQFEKAAAEAGMVNGGSSSSALP-ASGKAAKKRKRAKSADRLSVSDGDDVSSEG----TIISQDGEKSGKKVRFSMKNNLVWKPHNPLPPQCLRLPPSATPRGSALKKGVLPGPIKETPTPVKKTKPK 532          
BLAST of GR394681 vs. TrEMBL
Match: Q0J9E4_ORYSJ (Os04g0658600 protein (Fragment) OS=Oryza sativa subsp. japonica GN=Os04g0658600 PE=4 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 5.255e-28
Identity = 70/133 (52.63%), Postives = 85/133 (63.91%), Query Frame = 3
Query:    3 ISNLQKQFEKVAAEAGLDDSVASVCVTPEATGIVXXXXXXXXXXXXXXXXXQDFVLNGGGADESAVAKSGEKSSKKVRFSMKNNLVWKPHSPLPPQSVRIPPSVTPRGSALKKGVPPGPVREMPLQAKKMKAK 401
            +SNLQKQFEK AAEAG+ +  +S    P A+G                    D V + G    + +++ GEKS KKVRFSMKNNLVWKPH+PLPPQ +R+PPS TPRGSALKKGV PGP++E P   KK K K
Sbjct:  397 MSNLQKQFEKAAAEAGMVNGGSSSSALP-ASGKAAKKRKRAKSADRLSVSDGDDVSSEG----TIISQDGEKSGKKVRFSMKNNLVWKPHNPLPPQCLRLPPSATPRGSALKKGVLPGPIKETPTPVKKTKPK 524          
BLAST of GR394681 vs. TAIR peptide
Match: AT5G20600.1 (| Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: rRNA processing; LOCATED IN: preribosome, small subunit precursor; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleolar, Nop52 (InterPro:IPR010301); Has 543 Blast hits to 530 proteins in 201 species: Archae - 0; Bacteria - 10; Metazoa - 211; Fungi - 164; Plants - 46; Viruses - 0; Other Eukaryotes - 112 (source: NCBI BLink). | chr5:6966345-6967943 REVERSE LENGTH=532)

HSP 1 Score: 120.168 bits (300), Expect = 1.014e-27
Identity = 69/147 (46.94%), Postives = 86/147 (58.50%), Query Frame = 3
Query:    3 ISNLQKQFEKVAAEAGLDDS-VASVCVTPEATGIVXXXXXXXXXXXXXXXXXQDFVLNGGGADESAVAKSGEKSSKKVRFSMKNNLVWKPHSPLPPQSVRIPPSVTPRGSALKKGVPPGPVREMPLQAKKMKAKKGRRTIIGGVPSV 440
            IS+L+++FEK+A+E     S VASVC   E   +                  Q   +N   A+ S    S EKSSK+VRF+MKNNLVWKPH PLPPQ +R PPS TPRGSALK+G+P GPVRE+  +  K K K   R    GV S+
Sbjct:  383 ISDLRQEFEKIASEMSPSKSEVASVCDVAEPVSV---SKKTKKRKRENKGEEQVSTVNRDAAETSLAGPSSEKSSKRVRFAMKNNLVWKPHCPLPPQDLRCPPSATPRGSALKQGIPAGPVRELASRKTKKKVKPAARR---GVKSI 523          
The following BLAST results are available for this feature:
BLAST of GR394681 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
B9SR90_RICCO1.380e-3657.24Nnp-1 protein, putative OS=Ricinus communis GN=RCO... [more]
B9I4Z2_POPTR1.168e-3554.79Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
A5C227_VITVI1.336e-3154.30Putative uncharacterized protein OS=Vitis vinifera... [more]
B4FQZ4_MAIZE8.107e-2949.28Putative uncharacterized protein OS=Zea mays PE=2 ... [more]
B6U1R2_MAIZE1.383e-2850.00Nucleolar protein,Nop52 containing protein OS=Zea ... [more]
Q01HZ2_ORYSA3.081e-2852.63OSIGBa0132E09-OSIGBa0108L24.7 protein OS=Oryza sat... [more]
C0P5J3_MAIZE3.081e-2849.28Putative uncharacterized protein OS=Zea mays PE=2 ... [more]
A2XYH9_ORYSI3.081e-2852.63Putative uncharacterized protein OS=Oryza sativa s... [more]
Q8S3P9_ORYSJ5.255e-2852.63OSJNBa0011F23.10 protein OS=Oryza sativa subsp. ja... [more]
Q0J9E4_ORYSJ5.255e-2852.63Os04g0658600 protein (Fragment) OS=Oryza sativa su... [more]
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BLAST of GR394681 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT5G20600.11.014e-2746.94| Symbols: | FUNCTIONS IN: molecular_function unk... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 4..13
score: NAcoord: 35..49
score
NoneNo IPR availableSEGsegsegcoord: 66..77
score
NoneNo IPR availableSEGsegsegcoord: 35..51
score: NAcoord: 147..156
score
NoneNo IPR availableSEGsegsegcoord: 2..16
score
NoneNo IPR availableSEGsegsegcoord: 25..39
score
IPR010301Nucleolar, Nop52PANTHERPTHR13026NNP-1 PROTEIN (NOVEL NUCLEAR PROTEIN 1) (NOP52)coord: 62..148
score: 1.2

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GR394681 ID=GR394681; Name=GR394681; organism=Cicer arietinum; type=EST; length=659bp
TGATTTCAAACCTCCAGAAGCAGTTTGAGAAGGTTGCTGCGGAAGCAGGT
TTGGATGATAGTGTTGCAAGTGTATGTGTTACGCCAGAAGCTACTGGGAT
TGTATCTAAGAAGAGAAAGAGAACAAAGAATTCTAATTCTAAAGGAAAGA
CATCTCAGGATTTTGTTTTGAATGGTGGAGGTGCCGACGAATCTGCAGTT
GCAAAGAGTGGGGAGAAAAGTTCAAAGAAGGTAAGATTTTCGATGAAAAA
TAACTTGGTCTGGAAGCCACACAGTCCTTTACCTCCTCAGAGCGTAAGAA
TTCCTCCCTCTGTTACACCTAGAGGAAGTGCACTCAAAAAGGGTGTACCA
CCAGGTCCCGTCAGGGAGATGCCTCTCCAGGCCAAAAAGATGAAAGCGAA
GAAGGGCAGGAGGACAATCATTGGCGGTGTACCATCTGTCAAACGCTTGA
AGAAATTAAAATCTCGTTCCATGTAATGTCCCTGGTGTTATTATGGGATG
ATATTTCCATGATTTATTTTGTCATACTTTTATTTGTTAAATTGTTATTG
TTATGAAATTTTGAAACTTCATTATGATAGTTGCTTTGTGCACCAAGTGG
AAAACAAATTGACTCTTAGCATAGAGACGGTGTGTTCAAGATCCTAACGT
TGATTGATA
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: Biological Process
TermDefinition
GO:0006364rRNA processing
Vocabulary: INTERPRO
TermDefinition
IPR010301RRP1