GR404403

EST Overview
NameGR404403
Unique NameGR404403
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length592
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Homology
BLAST of GR404403 vs. SwissProt
Match: BH140_ARATH (Transcription factor bHLH140 OS=Arabidopsis thaliana GN=BHLH140 PE=4 SV=1)

HSP 1 Score: 268.085 bits (684), Expect = 8.508e-73
Identity = 129/181 (71.27%), Postives = 153/181 (84.53%), Query Frame = 1
Query:    4 PTLAFPSISTSDFQFSHDKAADIIVEKVSEYSNKIGNARLVLVDLTHKSKIMSLVKAKAAEKNVDTQKFFTHVGDITRLHSTGGLRCSVIANAANWRLKPGGGGVNAAIFDAAGPELESATKENVKTLSPGNAVVVPLPSSSPLFTREGVSHVIHVLGPNMNPHRPNCLNNDYEKGCRILK 546
            PTLAFPSIST+DFQF  +KA+DIIVEK  E+ +K+G ARLVLVDL+  SKI+SLVKAKA++KN+D+ KFFT VGDIT+L S GGL C+VIANA NWRLKPGGGGVNAAIF AAGP+LE+AT+    TL PG AVVVPLPS+ PL   EG++HVIHVLGPNMNP+RP+ LNNDY KGC+ L+
Sbjct:  456 PTLAFPSISTADFQFDLEKASDIIVEKAEEFLSKLGTARLVLVDLSRGSKILSLVKAKASQKNIDSAKFFTFVGDITKLRSEGGLHCNVIANATNWRLKPGGGGVNAAIFKAAGPDLETATRVRANTLLPGKAVVVPLPSTCPLHNAEGITHVIHVLGPNMNPNRPDNLNNDYTKGCKTLR 636          

HSP 2 Score: 26.9498 bits (58), Expect = 8.508e-73
Identity = 11/15 (73.33%), Postives = 13/15 (86.67%), Query Frame = 3
Query:  546 EAYASLFEGFASIVR 590
            EAY SLFEGF S+V+
Sbjct:  637 EAYTSLFEGFLSVVQ 651          
BLAST of GR404403 vs. TrEMBL
Match: B9IGD1_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_905274 PE=4 SV=1)

HSP 1 Score: 286.96 bits (733), Expect = 3.434e-77
Identity = 139/180 (77.22%), Postives = 161/180 (89.44%), Query Frame = 1
Query:    7 TLAFPSISTSDFQFSHDKAADIIVEKVSEYSNKIGNARLVLVDLTHKSKIMSLVKAKAAEKNVDTQKFFTHVGDITRLHSTGGLRCSVIANAANWRLKPGGGGVNAAIFDAAGPELESATKENVKTLSPGNAVVVPLPSSSPLFTREGVSHVIHVLGPNMNPHRPNCLNNDYEKGCRILK 546
            TLAFPSIST+DFQF+++KA+DIIVEKV E+ NK+ NAR VLVDL+H SKI+SLV+AKAA++N+D++KFFT VGDITRL+S GGLRC+ IANAANWRLKPGGGGVNAAIF AAGP LE+ATKE  K+L PG+AVVVPLPS SPL+TRE VSHVIHVLGPNMNP RPN LNNDY KGC IL+
Sbjct:  235 TLAFPSISTADFQFNNEKASDIIVEKVEEFVNKLENARFVLVDLSHGSKILSLVRAKAAKRNIDSKKFFTFVGDITRLYSQGGLRCNAIANAANWRLKPGGGGVNAAIFAAAGPSLETATKERAKSLLPGHAVVVPLPSDSPLYTREEVSHVIHVLGPNMNPQRPNSLNNDYTKGCSILR 414          

HSP 2 Score: 26.5646 bits (57), Expect = 3.434e-77
Identity = 12/15 (80.00%), Postives = 12/15 (80.00%), Query Frame = 3
Query:  546 EAYASLFEGFASIVR 590
            EAY SLF GF SIVR
Sbjct:  415 EAYTSLFTGFLSIVR 429          
BLAST of GR404403 vs. TrEMBL
Match: D7SRH4_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_217.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00003941001 PE=4 SV=1)

HSP 1 Score: 285.419 bits (729), Expect = 4.481e-77
Identity = 136/181 (75.14%), Postives = 160/181 (88.40%), Query Frame = 1
Query:    4 PTLAFPSISTSDFQFSHDKAADIIVEKVSEYSNKIGNARLVLVDLTHKSKIMSLVKAKAAEKNVDTQKFFTHVGDITRLHSTGGLRCSVIANAANWRLKPGGGGVNAAIFDAAGPELESATKENVKTLSPGNAVVVPLPSSSPLFTREGVSHVIHVLGPNMNPHRPNCLNNDYEKGCRILK 546
            PTLAFPSIST+DFQF+H+KAADII+EKV E+ NK+ NARLVLVDL+H SKI+SLV+AKAA++N+D+ KFFT VGDITRL+S GGLRC+ IANAANWRLKPGGGG NAAIF AAGPELE  TK+   +L PG A+VVPLPS+SPLF+REGV+HVIHVLGPNMN  RPNCLNNDY KG ++L+
Sbjct:  243 PTLAFPSISTADFQFNHEKAADIILEKVEEFVNKVENARLVLVDLSHGSKILSLVRAKAAQRNIDSNKFFTFVGDITRLYSKGGLRCNAIANAANWRLKPGGGGANAAIFSAAGPELEVETKKRAGSLIPGKALVVPLPSTSPLFSREGVTHVIHVLGPNMNRQRPNCLNNDYVKGSKVLR 423          

HSP 2 Score: 27.7202 bits (60), Expect = 4.481e-77
Identity = 12/14 (85.71%), Postives = 13/14 (92.86%), Query Frame = 3
Query:  546 EAYASLFEGFASIV 587
            EAY SLFEGFASI+
Sbjct:  424 EAYTSLFEGFASIM 437          
BLAST of GR404403 vs. TrEMBL
Match: B9SWY0_RICCO (Aprataxin, putative OS=Ricinus communis GN=RCOM_0489380 PE=4 SV=1)

HSP 1 Score: 282.337 bits (721), Expect = 1.185e-74
Identity = 137/180 (76.11%), Postives = 158/180 (87.78%), Query Frame = 1
Query:    4 PTLAFPSISTSDFQFSHDKAADIIVEKVSEYSNKIGNARLVLVDLTHKSKIMSLVKAKAAEKNVDTQKFFTHVGDITRLHSTGGLRCSVIANAANWRLKPGGGGVNAAIFDAAGPELESATKENVKTLSPGNAVVVPLPSSSPLFTREGVSHVIHVLGPNMNPHRPNCLNNDYEKGCRIL 543
            PTLAFPSIST+DFQF ++KA+DIIVEKV E+  K+GNARLVLVDL+  SKI+SLV+AKAA++N+ T KFFT VGDIT+L S GGLRC+VIANAANWRLKPGGGGVNAAI+ AAGP LE ATKE   +L PG+AVVVPLPS+SPL+ REGVSH+IHVLGPNMNP RPNCLN DY KGC+IL
Sbjct:  263 PTLAFPSISTADFQFHNEKASDIIVEKVEEFVKKLGNARLVLVDLSQGSKILSLVRAKAAQRNISTNKFFTFVGDITQLLSQGGLRCNVIANAANWRLKPGGGGVNAAIYSAAGPALEVATKELATSLLPGHAVVVPLPSNSPLYHREGVSHIIHVLGPNMNPQRPNCLNGDYAKGCKIL 442          

HSP 2 Score: 22.7126 bits (47), Expect = 1.185e-74
Identity = 9/15 (60.00%), Postives = 12/15 (80.00%), Query Frame = 3
Query:  546 EAYASLFEGFASIVR 590
            +AY SLF GF SI++
Sbjct:  444 DAYTSLFGGFVSILQ 458          
BLAST of GR404403 vs. TrEMBL
Match: A5BIM1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_005888 PE=4 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 9.055e-72
Identity = 135/203 (66.50%), Postives = 159/203 (78.33%), Query Frame = 1
Query:    4 PTLAFPSISTSDFQFSHDKAADIIVEKVSEYSNKIGNARLVLVDLTHKSKIMSLVKAKAAEKNVDTQKFFTHVGDITRLHSTGGLRCSVIANAANW----------------------RLKPGGGGVNAAIFDAAGPELESATKENVKTLSPGNAVVVPLPSSSPLFTREGVSHVIHVLGPNMNPHRPNCLNNDYEKGCRILK 546
            PTLAFPSIST+DFQF+H+KAADII+EKV E+ NK+ NARLVLVDL+H SKI+SLV+AKAA++N+D+ KFFT VGDITRL+S GGLRC+ IANAAN                       RLKPGGGG NAAIF AAGPELE  TK+   +L PG A+VVPLPS+SPLF+REGV+HVIHVLGPNMN  RPNCLNNDY KG ++L+
Sbjct:  362 PTLAFPSISTADFQFNHEKAADIILEKVEEFVNKVENARLVLVDLSHGSKILSLVRAKAAQRNIDSNKFFTFVGDITRLYSKGGLRCNAIANAANCKFPFVGLICMSRRSFEKASPCRRLKPGGGGANAAIFSAAGPELEVETKKRAGSLIPGKALVVPLPSTSPLFSREGVTHVIHVLGPNMNRQRPNCLNNDYVKGSKVLR 564          

HSP 2 Score: 27.7202 bits (60), Expect = 9.055e-72
Identity = 12/14 (85.71%), Postives = 13/14 (92.86%), Query Frame = 3
Query:  546 EAYASLFEGFASIV 587
            EAY SLFEGFASI+
Sbjct:  565 EAYTSLFEGFASIM 578          
BLAST of GR404403 vs. TrEMBL
Match: D7M738_ARALY (Basic helix-loop-helix family protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_486946 PE=4 SV=1)

HSP 1 Score: 265.388 bits (677), Expect = 7.575e-71
Identity = 128/181 (70.72%), Postives = 151/181 (83.43%), Query Frame = 1
Query:    4 PTLAFPSISTSDFQFSHDKAADIIVEKVSEYSNKIGNARLVLVDLTHKSKIMSLVKAKAAEKNVDTQKFFTHVGDITRLHSTGGLRCSVIANAANWRLKPGGGGVNAAIFDAAGPELESATKENVKTLSPGNAVVVPLPSSSPLFTREGVSHVIHVLGPNMNPHRPNCLNNDYEKGCRILK 546
            PTLAFPSIST+DFQF  +KA+DIIVEK  E+  K+G ARLVLVDL+  SKI+SLVKAKAA+KN+D+ +FFT VGDIT+L S GGL C+VIANA NWRLKPGGGGVNAAIF AAGP+LE+AT+    TL PG A VVPLPS+ PL   EG++HVIHVLGPNMNP+RP+ LNNDY KGC+ L+
Sbjct:  441 PTLAFPSISTADFQFDLEKASDIIVEKAEEFLPKLGTARLVLVDLSQGSKILSLVKAKAAQKNIDSARFFTFVGDITKLRSEGGLHCNVIANATNWRLKPGGGGVNAAIFKAAGPDLEAATRVRANTLLPGKAAVVPLPSTCPLHNAEGITHVIHVLGPNMNPNRPDNLNNDYTKGCKTLR 621          

HSP 2 Score: 26.9498 bits (58), Expect = 7.575e-71
Identity = 11/15 (73.33%), Postives = 13/15 (86.67%), Query Frame = 3
Query:  546 EAYASLFEGFASIVR 590
            EAY SLFEGF S+V+
Sbjct:  622 EAYTSLFEGFLSVVQ 636          
BLAST of GR404403 vs. TrEMBL
Match: Q10MW4_ORYSJ (Basic helix-loop-helix, putative, expressed OS=Oryza sativa subsp. japonica GN=LOC_Os03g18210 PE=4 SV=1)

HSP 1 Score: 259.996 bits (663), Expect = 9.005e-68
Identity = 127/199 (63.82%), Postives = 160/199 (80.40%), Query Frame = 1
Query:    7 TLAFPSISTSDFQFSHDKAADIIVEKVSEYSNKIGNARLVLVDLTHKSKIMSLVKAKAAEKNVDTQKFFTHVGDITRLHSTGGLRCSVIANAANWRLKPGGGGVNAAIFDAAGPELESATKENVKTLSPGNAVVVPLPSSSPLFTREGVSHVIHVLGPNMNPHRPNCLNNDYEKGCRILKR----LMHHYLKVLHQLLG 591
            TLAFPSIST+DFQF  D+A+DIIV+ V++   K  N RLVLVDL+HKS+I+SLVK KAA+KN+++ +FFT VGDIT+L S GGLRC+VIANAANWRLKPGGGGVNAAI++AAG +L+ ATKE   TL PG++V VPLPS+SPL  REGV+H+IHVLGPNMNP RP+CL NDY KG +IL      L  +++ ++   +G
Sbjct:  102 TLAFPSISTADFQFDLDRASDIIVDAVADILQKYDNIRLVLVDLSHKSRILSLVKEKAAKKNINSSRFFTFVGDITQLQSKGGLRCNVIANAANWRLKPGGGGVNAAIYNAAGEDLQRATKECADTLRPGSSVAVPLPSTSPLHQREGVTHIIHVLGPNMNPMRPDCLKNDYTKGSKILHEAYTSLFENFVAIVQSCMG 300          
BLAST of GR404403 vs. TrEMBL
Match: B9F7T0_ORYSJ (Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_10463 PE=4 SV=1)

HSP 1 Score: 259.996 bits (663), Expect = 9.005e-68
Identity = 127/199 (63.82%), Postives = 160/199 (80.40%), Query Frame = 1
Query:    7 TLAFPSISTSDFQFSHDKAADIIVEKVSEYSNKIGNARLVLVDLTHKSKIMSLVKAKAAEKNVDTQKFFTHVGDITRLHSTGGLRCSVIANAANWRLKPGGGGVNAAIFDAAGPELESATKENVKTLSPGNAVVVPLPSSSPLFTREGVSHVIHVLGPNMNPHRPNCLNNDYEKGCRILKR----LMHHYLKVLHQLLG 591
            TLAFPSIST+DFQF  D+A+DIIV+ V++   K  N RLVLVDL+HKS+I+SLVK KAA+KN+++ +FFT VGDIT+L S GGLRC+VIANAANWRLKPGGGGVNAAI++AAG +L+ ATKE   TL PG++V VPLPS+SPL  REGV+H+IHVLGPNMNP RP+CL NDY KG +IL      L  +++ ++   +G
Sbjct:  295 TLAFPSISTADFQFDLDRASDIIVDAVADILQKYDNIRLVLVDLSHKSRILSLVKEKAAKKNINSSRFFTFVGDITQLQSKGGLRCNVIANAANWRLKPGGGGVNAAIYNAAGEDLQRATKECADTLRPGSSVAVPLPSTSPLHQREGVTHIIHVLGPNMNPMRPDCLKNDYTKGSKILHEAYTSLFENFVAIVQSCMG 493          
BLAST of GR404403 vs. TrEMBL
Match: B8ALM5_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_11122 PE=4 SV=1)

HSP 1 Score: 259.225 bits (661), Expect = 1.536e-67
Identity = 127/199 (63.82%), Postives = 159/199 (79.90%), Query Frame = 1
Query:    7 TLAFPSISTSDFQFSHDKAADIIVEKVSEYSNKIGNARLVLVDLTHKSKIMSLVKAKAAEKNVDTQKFFTHVGDITRLHSTGGLRCSVIANAANWRLKPGGGGVNAAIFDAAGPELESATKENVKTLSPGNAVVVPLPSSSPLFTREGVSHVIHVLGPNMNPHRPNCLNNDYEKGCRILKR----LMHHYLKVLHQLLG 591
            TLAFPSIST+DFQF  D+A+DIIV+ V++   K  N RLVLVDL+HKS+I+SLVK KAA+KN+ + +FFT VGDIT+L S GGLRC+VIANAANWRLKPGGGGVNAAI++AAG +L+ ATKE   TL PG++V VPLPS+SPL  REGV+H+IHVLGPNMNP RP+CL NDY KG +IL      L  +++ ++   +G
Sbjct:  295 TLAFPSISTADFQFDLDRASDIIVDAVADILQKYDNIRLVLVDLSHKSRILSLVKEKAAKKNIKSSRFFTFVGDITQLQSKGGLRCNVIANAANWRLKPGGGGVNAAIYNAAGEDLQRATKECADTLRPGSSVAVPLPSTSPLHQREGVTHIIHVLGPNMNPMRPDCLKNDYTKGSKILHEAYTSLFENFVAIVQSCMG 493          
BLAST of GR404403 vs. TrEMBL
Match: C5WNI0_SORBI (Putative uncharacterized protein Sb01g038370 OS=Sorghum bicolor GN=Sb01g038370 PE=4 SV=1)

HSP 1 Score: 248.825 bits (634), Expect = 1.173e-65
Identity = 120/179 (67.04%), Postives = 149/179 (83.24%), Query Frame = 1
Query:    7 TLAFPSISTSDFQFSHDKAADIIVEKVSEYSNKIGNARLVLVDLTHKSKIMSLVKAKAAEKNVDTQKFFTHVGDITRLHSTGGLRCSVIANAANWRLKPGGGGVNAAIFDAAGPELESATKENVKTLSPGNAVVVPLPSSSPLFTREGVSHVIHVLGPNMNPHRPNCLNNDYEKGCRIL 543
            TLAFPSIST+DFQF  D+A+D+IV+   ++  K  N RLVLVDL+ KS+I+SLVK KAA+K++D+ +FFT+VGDIT+LH+ GGL+CSVIANAANWRLKPGGGGVNAAI++AAG  L+ ATK+    L PG +VVVPLPS+SPL  REGV+HVIHVLGPNMNP RP+ L NDY +G +IL
Sbjct:  134 TLAFPSISTADFQFDLDRASDVIVDTAFKFLQKFDNIRLVLVDLSEKSRILSLVKQKAAKKSIDSNRFFTYVGDITQLHTKGGLQCSVIANAANWRLKPGGGGVNAAIYNAAGESLQHATKKCADALRPGTSVVVPLPSTSPLHQREGVTHVIHVLGPNMNPMRPDYLKNDYTRGSKIL 312          

HSP 2 Score: 26.1794 bits (56), Expect = 1.173e-65
Identity = 12/15 (80.00%), Postives = 13/15 (86.67%), Query Frame = 3
Query:  546 EAYASLFEGFASIVR 590
            EAY SLFE FASIV+
Sbjct:  314 EAYNSLFESFASIVQ 328          
BLAST of GR404403 vs. TrEMBL
Match: A9SHQ3_PHYPA (Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_130174 PE=4 SV=1)

HSP 1 Score: 220.705 bits (561), Expect = 6.054e-56
Identity = 114/195 (58.46%), Postives = 140/195 (71.79%), Query Frame = 1
Query:    7 TLAFPSISTSDFQFSHDKAADIIVEKVSEYSNKIGNA--RLVLVDLTHKSKIMSLVKAKAAEKNVDTQKFFTHVGDITRLHSTGGLRCSVIANAANWRLKPGGGGVNAAIFDAAGPELESATKENVKTLSPGNAVVVPLPSSSPLFTREGVSHVIHVLGPNMNPHRPNCLNNDYEKGCRILKRLMHHYLKVLHQL 585
            +LAFPSIST+DFQF H KAADII+E   E+  K  +A  RLV VDL+  S ++S V AKAAE  + + +   + GDIT LH+TGG RC+ IANA NWRLKPGGGGVNAAIF A G ELE ATK  V+T+ PG+AV VPLP++SPL   +GVSHVIHVLGPNMN  RPN L  DY++GC IL++      +V   +
Sbjct:  227 SLAFPSISTADFQFDHGKAADIILETAVEFHRKPKHAGLRLVFVDLSPSSDMLSRVSAKAAEAGLSSLQLLIYAGDITTLHTTGGPRCNFIANATNWRLKPGGGGVNAAIFKAGGYELEMATKAVVQTVEPGDAVAVPLPATSPLRRLQGVSHVIHVLGPNMNSQRPNSLAGDYKQGCDILRKAYRTLFEVFSSI 421          
BLAST of GR404403 vs. TAIR peptide
Match: AT5G01310.1 (| Symbols: APTX | APRATAXIN-like | chr5:125304-128960 FORWARD LENGTH=912)

HSP 1 Score: 268.085 bits (684), Expect = 8.924e-74
Identity = 129/181 (71.27%), Postives = 153/181 (84.53%), Query Frame = 1
Query:    4 PTLAFPSISTSDFQFSHDKAADIIVEKVSEYSNKIGNARLVLVDLTHKSKIMSLVKAKAAEKNVDTQKFFTHVGDITRLHSTGGLRCSVIANAANWRLKPGGGGVNAAIFDAAGPELESATKENVKTLSPGNAVVVPLPSSSPLFTREGVSHVIHVLGPNMNPHRPNCLNNDYEKGCRILK 546
            PTLAFPSIST+DFQF  +KA+DIIVEK  E+ +K+G ARLVLVDL+  SKI+SLVKAKA++KN+D+ KFFT VGDIT+L S GGL C+VIANA NWRLKPGGGGVNAAIF AAGP+LE+AT+    TL PG AVVVPLPS+ PL   EG++HVIHVLGPNMNP+RP+ LNNDY KGC+ L+
Sbjct:  456 PTLAFPSISTADFQFDLEKASDIIVEKAEEFLSKLGTARLVLVDLSRGSKILSLVKAKASQKNIDSAKFFTFVGDITKLRSEGGLHCNVIANATNWRLKPGGGGVNAAIFKAAGPDLETATRVRANTLLPGKAVVVPLPSTCPLHNAEGITHVIHVLGPNMNPNRPDNLNNDYTKGCKTLR 636          

HSP 2 Score: 26.9498 bits (58), Expect = 8.924e-74
Identity = 11/15 (73.33%), Postives = 13/15 (86.67%), Query Frame = 3
Query:  546 EAYASLFEGFASIVR 590
            EAY SLFEGF S+V+
Sbjct:  637 EAYTSLFEGFLSVVQ 651          
The following BLAST results are available for this feature:
BLAST of GR404403 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 1
Match NameE-valueIdentityDescription
BH140_ARATH8.508e-7371.27Transcription factor bHLH140 OS=Arabidopsis thalia... [more]
back to top
BLAST of GR404403 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
B9IGD1_POPTR3.434e-7777.22Predicted protein (Fragment) OS=Populus trichocarp... [more]
D7SRH4_VITVI4.481e-7775.14Whole genome shotgun sequence of line PN40024, sca... [more]
B9SWY0_RICCO1.185e-7476.11Aprataxin, putative OS=Ricinus communis GN=RCOM_04... [more]
A5BIM1_VITVI9.055e-7266.50Putative uncharacterized protein OS=Vitis vinifera... [more]
D7M738_ARALY7.575e-7170.72Basic helix-loop-helix family protein OS=Arabidops... [more]
Q10MW4_ORYSJ9.005e-6863.82Basic helix-loop-helix, putative, expressed OS=Ory... [more]
B9F7T0_ORYSJ9.005e-6863.82Putative uncharacterized protein OS=Oryza sativa s... [more]
B8ALM5_ORYSI1.536e-6763.82Putative uncharacterized protein OS=Oryza sativa s... [more]
C5WNI0_SORBI1.173e-6567.04Putative uncharacterized protein Sb01g038370 OS=So... [more]
A9SHQ3_PHYPA6.054e-5658.46Predicted protein (Fragment) OS=Physcomitrella pat... [more]
back to top
BLAST of GR404403 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT5G01310.18.924e-7471.27| Symbols: APTX | APRATAXIN-like | chr5:125304-128... [more]
back to top
InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002589Appr-1-p processingPFAMPF01661Macrocoord: 92..173
score: 9.7
IPR002589Appr-1-p processingSMARTSM00506no descriptioncoord: 69..185
score: 0.
IPR002589Appr-1-p processingPROFILEPS51154MACROcoord: 57..197
score: 13
NoneNo IPR availableGENE3D3.40.220.10no descriptioncoord: 3..49
score: 6.2e-05coord: 69..169
score: 7.4
NoneNo IPR availablePANTHERPTHR11106GANGLIOSIDE INDUCED DIFFERENTIATION ASSOCIATED PROTEIN 2-RELATEDcoord: 75..121
score: 1.3
NoneNo IPR availableSUPERFAMILY52949Macro domain-likecoord: 45..195
score: 1.6e-19coord: 3..57
score: 5.8
NoneNo IPR availableSEGsegsegcoord: 31..45
score

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GR404403 ID=GR404403; Name=GR404403; organism=Cicer arietinum; type=EST; length=592bp
ACTCCCACTCTGGCATTTCCATCTATTTCAACATCTGATTTTCAATTCAG
CCATGACAAGGCAGCTGATATTATTGTTGAGAAGGTCAGTGAGTACTCAA
ATAAGATAGGGAATGCCAGACTTGTTCTAGTAGACTTGACTCACAAGTCA
AAAATTATGTCTTTAGTTAAAGCTAAAGCAGCAGAAAAGAATGTTGACAC
CCAAAAGTTTTTTACCCATGTTGGAGATATTACTCGCCTTCATTCCACAG
GTGGTTTGCGCTGTAGTGTCATAGCTAATGCTGCCAACTGGCGGTTAAAA
CCTGGTGGTGGAGGTGTTAATGCAGCAATTTTTGATGCTGCGGGTCCTGA
ACTGGAGTCTGCAACTAAAGAAAACGTTAAGACGCTTTCACCTGGGAATG
CTGTTGTTGTCCCTCTACCATCGTCTTCTCCATTGTTCACCAGAGAAGGT
GTAAGCCATGTAATACATGTCCTTGGACCTAATATGAATCCACATAGACC
AAATTGTCTCAACAATGATTATGAAAAAGGCTGCAGAATTCTCAAGAGGC
TTATGCATCACTATTTGAAGGTTTTGCATCAATTGTTAGGAA
back to top
Annotated Terms
The following terms have been associated with this EST:
Vocabulary: INTERPRO
TermDefinition
IPR002589Macro_dom