GR407060
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GR407060 vs. SwissProt
Match: Y1514_ARATH (Uncharacterized membrane protein At1g75140 OS=Arabidopsis thaliana GN=At1g75140 PE=1 SV=2) HSP 1 Score: 71.2478 bits (173), Expect = 4.083e-12 Identity = 50/142 (35.21%), Postives = 68/142 (47.89%), Query Frame = 3 Query: 3 FLFGAWHFFAKKKEALTSWGPDDXXXXXXXXXXXXXXXERSFVDS-SSRTSADVMDLXXXXXXXXXXXXXXXXXXXXXXXAASTYR-LGSADHNPRPASVDPDFR-AASELKFR-ASTMDPPGFPNRRDGMFSGNQIVNDRS 416 FLFGAWHFF+KKKE+LT+WGPDD + S S S+R + D MDL A YR +GS D + R ++R A E+K+R S +D GF RR+ +F N+ ++D S Sbjct: 485 FLFGAWHFFSKKKESLTAWGPDDPFSSTTMSSSSTTTAQNSSAFSESTRRNDDHMDL---------RRRYVSPSRYPPGAATGAYRSVGSNDPSSRAPVETTNYRTTAQEMKYRGGSGLDSGGFGKRRESLFGNNKALDDES 617
BLAST of GR407060 vs. TrEMBL
Match: B9IB61_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_1100293 PE=4 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.230e-23 Identity = 64/140 (45.71%), Postives = 81/140 (57.86%), Query Frame = 3 Query: 3 FLFGAWHFFAKKKEALTSWGPDDXXXXXXXXXXXXXXX----ERSFVDSSSRTSADVMDLXXXXXXXXXXXXXXXXXXXXXXXAASTYRLGSADHNPRPASVDPDFRAASELKFRASTMDPPGFPNRRDGMFSGNQIVND 410 FLFGAW FFAKKKEALTSWGPDD +RS+VDSSSR S D+M+L A S++R GSAD N RP+S+DP++RA+SEL FR ++ GFP RR+ +F NQ+V+D Sbjct: 499 FLFGAWQFFAKKKEALTSWGPDDPFSSASATIGAPVGSSASADRSYVDSSSR-STDMMELRAGGLIGPTRRYPSPSRYPGG--ATSSFRPGSADANTRPSSIDPNYRASSELTFRGPALESTGFPIRRENLFVNNQVVDD 635
BLAST of GR407060 vs. TrEMBL
Match: B9R7R8_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1593900 PE=4 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 2.912e-23 Identity = 62/141 (43.97%), Postives = 80/141 (56.74%), Query Frame = 3 Query: 3 FLFGAWHFFAKKKEALTSWGPDDXXXXXXXXXXXXXXX---ERSFVDSSSRTSADVMDLXXXXXXXXXXXXXXXXXXXXXXXAASTYRLGSADHNPRPASVDPDFRAASELKFRASTMDPPGFPNRRDGMFSGNQIVNDRS 416 FLFGAW FFAKKKEALTSWGPDD +R+F DSSSR D+M+L A+ ++R SAD N RP SVDP++R +SELK+R T++P GFP RR+ ++ NQ+V+D S Sbjct: 514 FLFGAWQFFAKKKEALTSWGPDDPFSSPAATTGASLGSSSGDRAFADSSSRRD-DIMELRSGGLRGPPRRYVSPSRYPGG--ASGSFRPSSADANSRPTSVDPNYRPSSELKYRGPTLEPTGFPKRRENLYVNNQVVDDSS 651
BLAST of GR407060 vs. TrEMBL
Match: Q9LN61_ARATH (F18O14.9 OS=Arabidopsis thaliana GN=At1g19370 PE=4 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.696e-11 Identity = 48/142 (33.80%), Postives = 67/142 (47.18%), Query Frame = 3 Query: 3 FLFGAWHFFAKKKEALTSWGPDDXXXXXXXXXXXXXXXERSFVDSSSRTSADVMDLXXXXXXXXXXXXXXXXXXXXXXXAASTYRLGSADHNPRPASVDPDFRAASE----LKFRASTMDPPGFPNRRDGMFSGNQIVNDRS 416 FLFGAWHFFAKKKE+LT+WGPDD E +F + S R D+MDL A +YR A+ A VD ++R ++ + S +D GF NRRD +F N+++++ S Sbjct: 486 FLFGAWHFFAKKKESLTAWGPDD--PFTPTGAQNSSAKEPTFTEPSRRND-DLMDL-------------------RRRYAGGSYRSVGANDPSSRAPVDGNYRTTAQDHNNYRGGGSGLDSNGFGNRRDHLFGNNKVLDNES 605
BLAST of GR407060 vs. TrEMBL
Match: D7KHC9_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_889368 PE=4 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.440e-11 Identity = 50/141 (35.46%), Postives = 65/141 (46.10%), Query Frame = 3 Query: 3 FLFGAWHFFAKKKEALTSWGPDDXXXXXXXXXXXXXXXERSFVDSSSRTSADVMDLXXXXXXXXXXXXXXXXXXXXXXXAASTYRLGSADHNPRPASVDPDFR--AASELKFR-ASTMDPPGFPNRRDGMFSGNQIVNDRS 416 FLFGAWHFFAKKKE+LT+WGPDD S SR + D+MDL A TYR A+ A VD ++R A +R S +D GF NRRD +F N+++++ S Sbjct: 490 FLFGAWHFFAKKKESLTAWGPDDPFTPTASQNSSATAPTFS---EPSRRNDDLMDL-------------------RRRYAGGTYRSVGANDPSSRAPVDGNYRTTAQDHNNYRGGSGLDSNGFGNRRDHLFGNNKVLDNES 608
BLAST of GR407060 vs. TAIR peptide
Match: AT1G19370.1 (| Symbols: | unknown protein; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G75140.1); Has 45 Blast hits to 43 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). | chr1:6692904-6694721 REVERSE LENGTH=605) HSP 1 Score: 71.2478 bits (173), Expect = 4.319e-13 Identity = 48/142 (33.80%), Postives = 67/142 (47.18%), Query Frame = 3 Query: 3 FLFGAWHFFAKKKEALTSWGPDDXXXXXXXXXXXXXXXERSFVDSSSRTSADVMDLXXXXXXXXXXXXXXXXXXXXXXXAASTYRLGSADHNPRPASVDPDFRAASE----LKFRASTMDPPGFPNRRDGMFSGNQIVNDRS 416 FLFGAWHFFAKKKE+LT+WGPDD E +F + S R D+MDL A +YR A+ A VD ++R ++ + S +D GF NRRD +F N+++++ S Sbjct: 486 FLFGAWHFFAKKKESLTAWGPDD--PFTPTGAQNSSAKEPTFTEPSRRND-DLMDL-------------------RRRYAGGSYRSVGANDPSSRAPVDGNYRTTAQDHNNYRGGGSGLDSNGFGNRRDHLFGNNKVLDNES 605
BLAST of GR407060 vs. TAIR peptide
Match: AT1G75140.1 (| Symbols: | unknown protein; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G19370.1); Has 51 Blast hits to 49 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 46; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). | chr1:28202166-28204019 REVERSE LENGTH=617) HSP 1 Score: 71.2478 bits (173), Expect = 4.319e-13 Identity = 50/142 (35.21%), Postives = 68/142 (47.89%), Query Frame = 3 Query: 3 FLFGAWHFFAKKKEALTSWGPDDXXXXXXXXXXXXXXXERSFVDS-SSRTSADVMDLXXXXXXXXXXXXXXXXXXXXXXXAASTYR-LGSADHNPRPASVDPDFR-AASELKFR-ASTMDPPGFPNRRDGMFSGNQIVNDRS 416 FLFGAWHFF+KKKE+LT+WGPDD + S S S+R + D MDL A YR +GS D + R ++R A E+K+R S +D GF RR+ +F N+ ++D S Sbjct: 485 FLFGAWHFFSKKKESLTAWGPDDPFSSTTMSSSSTTTAQNSSAFSESTRRNDDHMDL---------RRRYVSPSRYPPGAATGAYRSVGSNDPSSRAPVETTNYRTTAQEMKYRGGSGLDSGGFGKRRESLFGNNKALDDES 617 The following BLAST results are available for this feature:
BLAST of GR407060 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot) Total hits: 1
BLAST of GR407060 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl) Total hits: 4
BLAST of GR407060 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide) Total hits: 2
InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GR407060 ID=GR407060; Name=GR407060; organism=Cicer arietinum; type=EST; length=583bpback to top |