GR407060

EST Overview
NameGR407060
Unique NameGR407060
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length583
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Homology
BLAST of GR407060 vs. SwissProt
Match: Y1514_ARATH (Uncharacterized membrane protein At1g75140 OS=Arabidopsis thaliana GN=At1g75140 PE=1 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 4.083e-12
Identity = 50/142 (35.21%), Postives = 68/142 (47.89%), Query Frame = 3
Query:    3 FLFGAWHFFAKKKEALTSWGPDDXXXXXXXXXXXXXXXERSFVDS-SSRTSADVMDLXXXXXXXXXXXXXXXXXXXXXXXAASTYR-LGSADHNPRPASVDPDFR-AASELKFR-ASTMDPPGFPNRRDGMFSGNQIVNDRS 416
            FLFGAWHFF+KKKE+LT+WGPDD               + S   S S+R + D MDL                       A   YR +GS D + R      ++R  A E+K+R  S +D  GF  RR+ +F  N+ ++D S
Sbjct:  485 FLFGAWHFFSKKKESLTAWGPDDPFSSTTMSSSSTTTAQNSSAFSESTRRNDDHMDL---------RRRYVSPSRYPPGAATGAYRSVGSNDPSSRAPVETTNYRTTAQEMKYRGGSGLDSGGFGKRRESLFGNNKALDDES 617          
BLAST of GR407060 vs. TrEMBL
Match: B9IB61_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_1100293 PE=4 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.230e-23
Identity = 64/140 (45.71%), Postives = 81/140 (57.86%), Query Frame = 3
Query:    3 FLFGAWHFFAKKKEALTSWGPDDXXXXXXXXXXXXXXX----ERSFVDSSSRTSADVMDLXXXXXXXXXXXXXXXXXXXXXXXAASTYRLGSADHNPRPASVDPDFRAASELKFRASTMDPPGFPNRRDGMFSGNQIVND 410
            FLFGAW FFAKKKEALTSWGPDD                   +RS+VDSSSR S D+M+L                       A S++R GSAD N RP+S+DP++RA+SEL FR   ++  GFP RR+ +F  NQ+V+D
Sbjct:  499 FLFGAWQFFAKKKEALTSWGPDDPFSSASATIGAPVGSSASADRSYVDSSSR-STDMMELRAGGLIGPTRRYPSPSRYPGG--ATSSFRPGSADANTRPSSIDPNYRASSELTFRGPALESTGFPIRRENLFVNNQVVDD 635          
BLAST of GR407060 vs. TrEMBL
Match: B9R7R8_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1593900 PE=4 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 2.912e-23
Identity = 62/141 (43.97%), Postives = 80/141 (56.74%), Query Frame = 3
Query:    3 FLFGAWHFFAKKKEALTSWGPDDXXXXXXXXXXXXXXX---ERSFVDSSSRTSADVMDLXXXXXXXXXXXXXXXXXXXXXXXAASTYRLGSADHNPRPASVDPDFRAASELKFRASTMDPPGFPNRRDGMFSGNQIVNDRS 416
            FLFGAW FFAKKKEALTSWGPDD                  +R+F DSSSR   D+M+L                       A+ ++R  SAD N RP SVDP++R +SELK+R  T++P GFP RR+ ++  NQ+V+D S
Sbjct:  514 FLFGAWQFFAKKKEALTSWGPDDPFSSPAATTGASLGSSSGDRAFADSSSRRD-DIMELRSGGLRGPPRRYVSPSRYPGG--ASGSFRPSSADANSRPTSVDPNYRPSSELKYRGPTLEPTGFPKRRENLYVNNQVVDDSS 651          
BLAST of GR407060 vs. TrEMBL
Match: Q9LN61_ARATH (F18O14.9 OS=Arabidopsis thaliana GN=At1g19370 PE=4 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.696e-11
Identity = 48/142 (33.80%), Postives = 67/142 (47.18%), Query Frame = 3
Query:    3 FLFGAWHFFAKKKEALTSWGPDDXXXXXXXXXXXXXXXERSFVDSSSRTSADVMDLXXXXXXXXXXXXXXXXXXXXXXXAASTYRLGSADHNPRPASVDPDFRAASE----LKFRASTMDPPGFPNRRDGMFSGNQIVNDRS 416
            FLFGAWHFFAKKKE+LT+WGPDD               E +F + S R   D+MDL                       A  +YR   A+     A VD ++R  ++     +   S +D  GF NRRD +F  N+++++ S
Sbjct:  486 FLFGAWHFFAKKKESLTAWGPDD--PFTPTGAQNSSAKEPTFTEPSRRND-DLMDL-------------------RRRYAGGSYRSVGANDPSSRAPVDGNYRTTAQDHNNYRGGGSGLDSNGFGNRRDHLFGNNKVLDNES 605          
BLAST of GR407060 vs. TrEMBL
Match: D7KHC9_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_889368 PE=4 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 7.440e-11
Identity = 50/141 (35.46%), Postives = 65/141 (46.10%), Query Frame = 3
Query:    3 FLFGAWHFFAKKKEALTSWGPDDXXXXXXXXXXXXXXXERSFVDSSSRTSADVMDLXXXXXXXXXXXXXXXXXXXXXXXAASTYRLGSADHNPRPASVDPDFR--AASELKFR-ASTMDPPGFPNRRDGMFSGNQIVNDRS 416
            FLFGAWHFFAKKKE+LT+WGPDD                 S     SR + D+MDL                       A  TYR   A+     A VD ++R  A     +R  S +D  GF NRRD +F  N+++++ S
Sbjct:  490 FLFGAWHFFAKKKESLTAWGPDDPFTPTASQNSSATAPTFS---EPSRRNDDLMDL-------------------RRRYAGGTYRSVGANDPSSRAPVDGNYRTTAQDHNNYRGGSGLDSNGFGNRRDHLFGNNKVLDNES 608          
BLAST of GR407060 vs. TAIR peptide
Match: AT1G19370.1 (| Symbols: | unknown protein; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G75140.1); Has 45 Blast hits to 43 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). | chr1:6692904-6694721 REVERSE LENGTH=605)

HSP 1 Score: 71.2478 bits (173), Expect = 4.319e-13
Identity = 48/142 (33.80%), Postives = 67/142 (47.18%), Query Frame = 3
Query:    3 FLFGAWHFFAKKKEALTSWGPDDXXXXXXXXXXXXXXXERSFVDSSSRTSADVMDLXXXXXXXXXXXXXXXXXXXXXXXAASTYRLGSADHNPRPASVDPDFRAASE----LKFRASTMDPPGFPNRRDGMFSGNQIVNDRS 416
            FLFGAWHFFAKKKE+LT+WGPDD               E +F + S R   D+MDL                       A  +YR   A+     A VD ++R  ++     +   S +D  GF NRRD +F  N+++++ S
Sbjct:  486 FLFGAWHFFAKKKESLTAWGPDD--PFTPTGAQNSSAKEPTFTEPSRRND-DLMDL-------------------RRRYAGGSYRSVGANDPSSRAPVDGNYRTTAQDHNNYRGGGSGLDSNGFGNRRDHLFGNNKVLDNES 605          
BLAST of GR407060 vs. TAIR peptide
Match: AT1G75140.1 (| Symbols: | unknown protein; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G19370.1); Has 51 Blast hits to 49 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 46; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). | chr1:28202166-28204019 REVERSE LENGTH=617)

HSP 1 Score: 71.2478 bits (173), Expect = 4.319e-13
Identity = 50/142 (35.21%), Postives = 68/142 (47.89%), Query Frame = 3
Query:    3 FLFGAWHFFAKKKEALTSWGPDDXXXXXXXXXXXXXXXERSFVDS-SSRTSADVMDLXXXXXXXXXXXXXXXXXXXXXXXAASTYR-LGSADHNPRPASVDPDFR-AASELKFR-ASTMDPPGFPNRRDGMFSGNQIVNDRS 416
            FLFGAWHFF+KKKE+LT+WGPDD               + S   S S+R + D MDL                       A   YR +GS D + R      ++R  A E+K+R  S +D  GF  RR+ +F  N+ ++D S
Sbjct:  485 FLFGAWHFFSKKKESLTAWGPDDPFSSTTMSSSSTTTAQNSSAFSESTRRNDDHMDL---------RRRYVSPSRYPPGAATGAYRSVGSNDPSSRAPVETTNYRTTAQEMKYRGGSGLDSGGFGKRRESLFGNNKALDDES 617          
The following BLAST results are available for this feature:
BLAST of GR407060 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 1
Match NameE-valueIdentityDescription
Y1514_ARATH4.083e-1235.21Uncharacterized membrane protein At1g75140 OS=Arab... [more]
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BLAST of GR407060 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 4
Match NameE-valueIdentityDescription
B9IB61_POPTR2.230e-2345.71Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9R7R8_RICCO2.912e-2343.97Putative uncharacterized protein OS=Ricinus commun... [more]
Q9LN61_ARATH5.696e-1133.80F18O14.9 OS=Arabidopsis thaliana GN=At1g19370 PE=4... [more]
D7KHC9_ARALY7.440e-1135.46Putative uncharacterized protein OS=Arabidopsis ly... [more]
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BLAST of GR407060 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 2
Match NameE-valueIdentityDescription
AT1G19370.14.319e-1333.80| Symbols: | unknown protein; LOCATED IN: endopla... [more]
AT1G75140.14.319e-1335.21| Symbols: | unknown protein; LOCATED IN: endopla... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 24..38
score: NAcoord: 57..79
score
NoneNo IPR availableSEGsegsegcoord: 5..27
score

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GR407060 ID=GR407060; Name=GR407060; organism=Cicer arietinum; type=EST; length=583bp
TTTTTCTATTTGGTGCTTGGCATTTTTTTGCAAAGAAAAAGGAAGCTCTT
ACATCATGGGGACCGGACGATCCATTGACATCAGCGTCTGGCGCTCCCTT
GGCATCCAGTTCCGGAGAGCGATCTTTCGTCGACTCTTCTTCAAGAACTT
CTGCCGATGTTATGGATCTTAGAAGTGGAGCTCTCAGAGGTCCACCACCA
CCAAGAAGGTATGGCTCACCTTCAAGGTTTCCTGGCGGGGCAGCAAGTAC
CTATAGACTTGGTTCTGCTGATCACAATCCTAGACCAGCTTCGGTTGATC
CCGATTTTCGAGCAGCATCGGAGCTTAAATTCAGGGCCTCAACCATGGAT
CCTCCTGGTTTTCCAAATAGAAGAGACGGCATGTTTTCAGGAAATCAAAT
TGTAAATGATCGCAGTTGAGCGGCGAAGTTAATTAATTTCATGAGCTTTT
TATCTAATTAGTTCGAGATTTCCCTTAGTTTTTAATCTTTTGATAGGATC
ATTTGGCATCACTTAGCTATTTGGTCTCACTGTGTTTTAGCTTTCAAGGG
AAAAATAAATTATAATGAGAAGCTTCCAAGTTG
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