GR408599

EST Overview


Name	GR408599
Unique Name	GR408599
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	468

Libraries


Library Name	Type
LIBEST_024786 JG11 Salinity-stressed chickpea root cDNA library	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
KEGG analysis for Cicer arietinum unigene v1	2011-01-05
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

[Close]

BLAST of GR408599 vs. SwissProt
Match: TRY_ARATH (Transcription factor TRY OS=Arabidopsis thaliana GN=TRY PE=1 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 5.326e-23
Identity = 49/71 (69.01%), Postives = 62/71 (87.32%), Query Frame = 1

Query:  118 NSQEVSSIEWEFIEMSEQEEDLIRRMYCLVGDRWNLIAGRIPGRKAEEIERFWIMRHTDAFSAKRSERKSN 330
            +S+EVSSIEWEFI M+EQEEDLI RMY LVGDRW+LIAGR+PGR+ EEIER+WIMR+++ F+ KR +  S+
Sbjct:   19 DSEEVSSIEWEFINMTEQEEDLIFRMYRLVGDRWDLIAGRVPGRQPEEIERYWIMRNSEGFADKRRQLHSS 89

[Close]

BLAST of GR408599 vs. SwissProt
Match: CPC_ARATH (Transcription factor CPC OS=Arabidopsis thaliana GN=CPC PE=1 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 1.312e-21
Identity = 51/95 (53.68%), Postives = 66/95 (69.47%), Query Frame = 1

Query:   34 FNNHPSSYFNMEQHSQSKAKNNSSNTNINSQEVSSIEWEFIEMSEQEEDLIRRMYCLVGDRWNLIAGRIPGRKAEEIERFWIMRHTDAFSAKRSE 318
            F +  +   +  +  QSKAK + S      +EVSSIEWE ++MSE+EEDLI RMY LVGDRW LIAGRIPGR  EEIER+W+M+H   F+ +R +
Sbjct:    2 FRSDKAEKMDKRRRRQSKAKASCS------EEVSSIEWEAVKMSEEEEDLISRMYKLVGDRWELIAGRIPGRTPEEIERYWLMKHGVVFANRRRD 90

[Close]

BLAST of GR408599 vs. SwissProt
Match: MYB82_ARATH (Transcription factor MYB82 OS=Arabidopsis thaliana GN=MYB82 PE=1 SV=1)

HSP 1 Score: 55.4546 bits (132), Expect = 1.408e-7
Identity = 23/39 (58.97%), Postives = 32/39 (82.05%), Query Frame = 1

Query:  160 MSEQEEDLIRRMYCLVGDRWNLIAGRIPGRKAEEIERFW 276
            MS QE+DLI RM+ L+G+RW+LIAGR+PGR   E++ +W
Sbjct:   70 MSPQEQDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYW 108

[Close]

BLAST of GR408599 vs. SwissProt
Match: MYB5_ARATH (Transcription repressor MYB5 OS=Arabidopsis thaliana GN=MYB5 PE=1 SV=1)

HSP 1 Score: 52.7582 bits (125), Expect = 9.128e-7
Identity = 22/39 (56.41%), Postives = 31/39 (79.49%), Query Frame = 1

Query:  160 MSEQEEDLIRRMYCLVGDRWNLIAGRIPGRKAEEIERFW 276
            ++  EEDLI R++ L+G+RW+LIAGRIPGR   EI+ +W
Sbjct:   81 ITSDEEDLILRLHRLLGNRWSLIAGRIPGRTDNEIKNYW 119

[Close]

BLAST of GR408599 vs. TrEMBL
Match: B9GQZ8_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=MYB114 PE=4 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 5.859e-25
Identity = 55/78 (70.51%), Postives = 64/78 (82.05%), Query Frame = 1

Query:   85 KAKNNSSNTNINSQEVSSIEWEFIEMSEQEEDLIRRMYCLVGDRWNLIAGRIPGRKAEEIERFWIMRHTDAFSAKRSE 318
            + K   + T+ + QEVSSIEWEFI MSEQEEDLI RMY LVGDRW LIAGRIPGRKAEEIER+WIMRH + F+++R E
Sbjct:    3 RRKQAKTTTHCSDQEVSSIEWEFINMSEQEEDLIYRMYKLVGDRWALIAGRIPGRKAEEIERYWIMRHCEGFASRRKE 80

[Close]

BLAST of GR408599 vs. TrEMBL
Match: B9I8W0_POPTR (Predicted protein OS=Populus trichocarpa GN=MYB217 PE=4 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 1.705e-24
Identity = 57/87 (65.52%), Postives = 69/87 (79.31%), Query Frame = 1

Query:   64 MEQHSQSKAKNNSSNTNINSQEVSSIEWEFIEMSEQEEDLIRRMYCLVGDRWNLIAGRIPGRKAEEIERFWIMRHTDAFSAKRSERK 324
            M++  + +AK  S     + QEVSSIEWEFI MSEQEEDLI RM+ LVGDRW LIAGRIPGRKAEEIERFW+MRH + F+++R E+K
Sbjct:    1 MDRRRKKQAKTTSC---CSEQEVSSIEWEFINMSEQEEDLIYRMHNLVGDRWALIAGRIPGRKAEEIERFWLMRHGEGFASRRREQK 84

[Close]

BLAST of GR408599 vs. TrEMBL
Match: B9SBK5_RICCO (Triptychon and cpc, putative OS=Ricinus communis GN=RCOM_0719860 PE=4 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 2.226e-24
Identity = 55/71 (77.46%), Postives = 62/71 (87.32%), Query Frame = 1

Query:  121 SQEVSSIEWEFIEMSEQEEDLIRRMYCLVGDRWNLIAGRIPGRKAEEIERFWIMRHTDAFSAKRSE-RKSN 330
            SQEVSSIEWEFI MSEQEED+I RMY LVGDRW LIAGR+PGRKAEEIERFWIM+H + F+ +R E +KSN
Sbjct:   18 SQEVSSIEWEFINMSEQEEDIIYRMYKLVGDRWALIAGRVPGRKAEEIERFWIMKHAEGFAGRRKELKKSN 88

[Close]

BLAST of GR408599 vs. TrEMBL
Match: B9I543_POPTR (Predicted protein OS=Populus trichocarpa GN=MYB144 PE=4 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 2.908e-24
Identity = 56/83 (67.47%), Postives = 67/83 (80.72%), Query Frame = 1

Query:   64 MEQHSQSKAKNNSSNTNINSQEVSSIEWEFIEMSEQEEDLIRRMYCLVGDRWNLIAGRIPGRKAEEIERFWIMRHTDAFSAKR 312
            M++  + + K    N N  S+EVSSIEWEFI+MSEQEEDLI RMY LVG+RW+LIAGRIPGRKAEEIERFWIM+H + F+ KR
Sbjct:    1 MDRRRRRRRKQAKIN-NSESEEVSSIEWEFIDMSEQEEDLIYRMYRLVGERWDLIAGRIPGRKAEEIERFWIMKHREGFAEKR 82

[Close]

BLAST of GR408599 vs. TrEMBL
Match: A5CBT5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_033192 PE=4 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.105e-23
Identity = 58/87 (66.67%), Postives = 67/87 (77.01%), Query Frame = 1

Query:   64 MEQHSQSKAKNNSSNTNINSQEVSSIEWEFIEMSEQEEDLIRRMYCLVGDRWNLIAGRIPGRKAEEIERFWIMRHTDAFSAKRSERK 324
            M++  + +AK +SS     S+EVSSI WEFI M+EQEEDLI RMY LVGDRW LIAGRIPGRKAEEIERFWIMRH + F+  R E K
Sbjct:    1 MDRRRRKQAKTHSSCC---SEEVSSIAWEFINMTEQEEDLIYRMYKLVGDRWALIAGRIPGRKAEEIERFWIMRHGEGFAGIRKELK 84

[Close]

BLAST of GR408599 vs. TrEMBL
Match: B9N984_POPTR (Predicted protein OS=Populus trichocarpa GN=MYB179 PE=4 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 2.084e-22
Identity = 51/80 (63.75%), Postives = 63/80 (78.75%), Query Frame = 1

Query:   64 MEQHSQSKAKNNSSNTNINSQEVSSIEWEFIEMSEQEEDLIRRMYCLVGDRWNLIAGRIPGRKAEEIERFWIMRHTDAFS 303
            ME  ++ + +      +  S+EVSSIEWEFI MSEQEEDLI RM+ LVG+RW+LIAGRIPGRKAEEIERFWIM+H + F+
Sbjct:    1 MESMNRRRRRKQPKINSSESEEVSSIEWEFINMSEQEEDLIYRMHRLVGERWDLIAGRIPGRKAEEIERFWIMKHREGFA 80

[Close]

BLAST of GR408599 vs. TrEMBL
Match: D7MWK3_ARALY (Predicted protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_655942 PE=4 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 2.722e-22
Identity = 53/84 (63.10%), Postives = 65/84 (77.38%), Query Frame = 1

Query:   61 NMEQHSQSKAKNNSSNTNINSQEVSSIEWEFIEMSEQEEDLIRRMYCLVGDRWNLIAGRIPGRKAEEIERFWIMRHTDAFSAKR 312
            N  +  +S  +   + +  +S+EVSSIEWEFI M+EQEEDLI RMY LVGDRW+LIAGR+ GRKA EIERFWIMR++D FS KR
Sbjct:    5 NRLRRGRSFRQTKFTRSRHDSEEVSSIEWEFISMTEQEEDLISRMYRLVGDRWDLIAGRVVGRKANEIERFWIMRNSDFFSHKR 88

[Close]

BLAST of GR408599 vs. TrEMBL
Match: D7MSV5_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_357563 PE=4 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 4.642e-22
Identity = 50/89 (56.18%), Postives = 67/89 (75.28%), Query Frame = 1

Query:   64 MEQHSQSKAKNNSSNTNINSQEVSSIEWEFIEMSEQEEDLIRRMYCLVGDRWNLIAGRIPGRKAEEIERFWIMRHTDAFSAKRSERKSN 330
            M+   + + +        +S+EVSSIEWEFI M+EQEEDLI RMY LVGDRW+LIAGR+PGR+ EEIER+WIMR+++ F+ KR +  S+
Sbjct:    1 MDNTDRRRRRKQHKTALHDSEEVSSIEWEFINMTEQEEDLIFRMYRLVGDRWDLIAGRVPGRQPEEIERYWIMRNSEGFAEKRRQLHSS 89

[Close]

BLAST of GR408599 vs. TrEMBL
Match: D7LC50_ARALY (Myb family transcription factor OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_902029 PE=4 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.034e-21
Identity = 52/84 (61.90%), Postives = 65/84 (77.38%), Query Frame = 1

Query:   61 NMEQHSQSKAKNNSSNTNINSQEVSSIEWEFIEMSEQEEDLIRRMYCLVGDRWNLIAGRIPGRKAEEIERFWIMRHTDAFSAKR 312
            N  +  +S  +   + +  +S+EVSSIEWEFI M+EQEEDLI RM+ LVGDRW+LIAGR+ GRKA EIERFWIMR++D FS KR
Sbjct:    5 NRLRRGRSFRQTKFTRSRHDSEEVSSIEWEFISMTEQEEDLISRMHRLVGDRWDLIAGRVVGRKANEIERFWIMRNSDFFSHKR 88

[Close]

BLAST of GR408599 vs. TrEMBL
Match: B9RIL7_RICCO (Triptychon and cpc, putative OS=Ricinus communis GN=RCOM_1580430 PE=4 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.034e-21
Identity = 49/72 (68.06%), Postives = 59/72 (81.94%), Query Frame = 1

Query:   85 KAKNNSSNTNINSQEVSSIEWEFIEMSEQEEDLIRRMYCLVGDRWNLIAGRIPGRKAEEIERFWIMRHTDAF 300
            + +  +  T + S+EVSSIEWE+I M++QEEDLI RMY LVG+RW+LIAGRIPGRKAEEIERFWIMRH   F
Sbjct:    4 RRRKQAKITIVESEEVSSIEWEYINMNQQEEDLIYRMYRLVGERWDLIAGRIPGRKAEEIERFWIMRHRKVF 75

[Close]

BLAST of GR408599 vs. TAIR peptide
Match: AT5G53200.1 (| Symbols: TRY | Homeodomain-like superfamily protein | chr5:21582913-21583960 FORWARD LENGTH=106)

HSP 1 Score: 106.686 bits (265), Expect = 6.116e-24
Identity = 49/71 (69.01%), Postives = 62/71 (87.32%), Query Frame = 1

Query:  118 NSQEVSSIEWEFIEMSEQEEDLIRRMYCLVGDRWNLIAGRIPGRKAEEIERFWIMRHTDAFSAKRSERKSN 330
            +S+EVSSIEWEFI M+EQEEDLI RMY LVGDRW+LIAGR+PGR+ EEIER+WIMR+++ F+ KR +  S+
Sbjct:   19 DSEEVSSIEWEFINMTEQEEDLIFRMYRLVGDRWDLIAGRVPGRQPEEIERYWIMRNSEGFADKRRQLHSS 89

[Close]

BLAST of GR408599 vs. TAIR peptide
Match: AT2G30420.1 (| Symbols: ETC2 | Homeodomain-like superfamily protein | chr2:12960937-12961915 REVERSE LENGTH=112)

HSP 1 Score: 104.76 bits (260), Expect = 2.324e-23
Identity = 49/70 (70.00%), Postives = 60/70 (85.71%), Query Frame = 1

Query:  103 SNTNINSQEVSSIEWEFIEMSEQEEDLIRRMYCLVGDRWNLIAGRIPGRKAEEIERFWIMRHTDAFSAKR 312
            + +  +S+EVSSIEWEFI M+EQEEDLI RMY LVG+RW+LIAGR+ GRKA EIER+WIMR++D FS KR
Sbjct:   21 TRSRYDSEEVSSIEWEFISMTEQEEDLISRMYRLVGNRWDLIAGRVVGRKANEIERYWIMRNSDYFSHKR 90

[Close]

BLAST of GR408599 vs. TAIR peptide
Match: AT2G46410.1 (| Symbols: CPC | Homeodomain-like superfamily protein | chr2:19049315-19050185 REVERSE LENGTH=94)

HSP 1 Score: 102.064 bits (253), Expect = 1.507e-22
Identity = 51/95 (53.68%), Postives = 66/95 (69.47%), Query Frame = 1

Query:   34 FNNHPSSYFNMEQHSQSKAKNNSSNTNINSQEVSSIEWEFIEMSEQEEDLIRRMYCLVGDRWNLIAGRIPGRKAEEIERFWIMRHTDAFSAKRSE 318
            F +  +   +  +  QSKAK + S      +EVSSIEWE ++MSE+EEDLI RMY LVGDRW LIAGRIPGR  EEIER+W+M+H   F+ +R +
Sbjct:    2 FRSDKAEKMDKRRRRQSKAKASCS------EEVSSIEWEAVKMSEEEEDLISRMYKLVGDRWELIAGRIPGRTPEEIERYWLMKHGVVFANRRRD 90

[Close]

BLAST of GR408599 vs. TAIR peptide
Match: AT4G01060.3 (| Symbols: ETC3, CPL3 | CAPRICE-like MYB3 | chr4:460534-460967 FORWARD LENGTH=75)

HSP 1 Score: 97.4413 bits (241), Expect = 3.711e-21
Identity = 43/75 (57.33%), Postives = 58/75 (77.33%), Query Frame = 1

Query:   64 MEQHSQSKAKNNSSNTNINSQEVSSIEWEFIEMSEQEEDLIRRMYCLVGDRWNLIAGRIPGRKAEEIERFWIMRH 288
            M+ H ++K    +S    +S+EVSS+EWE + MS++EEDL+ RM+ LVGDRW LIAGRIPGR A EIERFW+M++
Sbjct:    1 MDNHRRTKQPKTNSIVTSSSEEVSSLEWEVVNMSQEEEDLVSRMHKLVGDRWELIAGRIPGRTAGEIERFWVMKN 75

[Close]

BLAST of GR408599 vs. TAIR peptide
Match: AT2G30432.1 (| Symbols: TCL1 | Homeodomain-like superfamily protein | chr2:12968763-12970060 REVERSE LENGTH=84)

HSP 1 Score: 97.0561 bits (240), Expect = 4.846e-21
Identity = 46/64 (71.88%), Postives = 56/64 (87.50%), Query Frame = 1

Query:  118 NSQEVSSIEWEFIEMSEQEEDLIRRMYCLVGDRWNLIAGRIPGRKAEEIERFWIMRHTDAFSAK 309
            +SQEVSS++WEFI M+EQEEDLI RMY LVGDRW+LIA R+ GR+A+EIER+WIMR+ D FS K
Sbjct:   21 SSQEVSSMKWEFINMTEQEEDLIFRMYRLVGDRWDLIARRVVGREAKEIERYWIMRNCDYFSHK 84

[Close]

BLAST of GR408599 vs. TAIR peptide
Match: AT1G01380.1 (| Symbols: ETC1 | Homeodomain-like superfamily protein | chr1:147267-147740 FORWARD LENGTH=83)

HSP 1 Score: 95.5153 bits (236), Expect = 1.410e-20
Identity = 46/75 (61.33%), Postives = 62/75 (82.67%), Query Frame = 1

Query:   73 HSQSKAKNNSSNTNI---NSQEVSSIEWEFIEMSEQEEDLIRRMYCLVGDRWNLIAGRIPGRKAEEIERFWIMRH 288
            ++Q K+K+  +N  I   +S+EVSS+EWE I M+++EEDLI RMY LVG+RW+LIAGRIPGR AEEIERFW+M++
Sbjct:    2 NTQRKSKHLKTNPTIVASSSEEVSSLEWEEIAMAQEEEDLICRMYKLVGERWDLIAGRIPGRTAEEIERFWVMKN 76

[Close]

BLAST of GR408599 vs. TAIR peptide
Match: AT2G30424.1 (| Symbols: TCL2 | Homeodomain-like superfamily protein | chr2:12964506-12965468 REVERSE LENGTH=100)

HSP 1 Score: 93.5893 bits (231), Expect = 5.358e-20
Identity = 44/76 (57.89%), Postives = 61/76 (80.26%), Query Frame = 1

Query:   85 KAKNNSSNTNINSQEVSSIEWEFIEMSEQEEDLIRRMYCLVGDRWNLIAGRIPGRKAEEIERFWIMRHTDAFSAKR 312
            +++  S  T  ++ EV+S++WEFI M+EQEEDLI RM+ LVGDRW+LIAGR+ GR+A++IER+WIMR+ D  S KR
Sbjct:   11 RSRKQSKFTLGDTAEVNSVKWEFINMTEQEEDLIFRMHRLVGDRWDLIAGRVVGREAKDIERYWIMRNCDHCSHKR 86

[Close]

BLAST of GR408599 vs. TAIR peptide
Match: AT4G01060.2 (| Symbols: ETC3, CPL3 | CAPRICE-like MYB3 | chr4:460534-460967 FORWARD LENGTH=74)

HSP 1 Score: 93.2041 bits (230), Expect = 6.998e-20
Identity = 46/76 (60.53%), Postives = 59/76 (77.63%), Query Frame = 1

Query:   64 MEQHSQSKA-KNNSSNTNINSQEVSSIEWEFIEMSEQEEDLIRRMYCLVGDRWNLIAGRIPGRKAEEIERFWIMRH 288
            M+ H ++K  K NS  T+  S EVSS+EWE + MS++EEDL+ RM+ LVGDRW LIAGRIPGR A EIERFW+M++
Sbjct:    1 MDNHRRTKQPKTNSIVTS--SSEVSSLEWEVVNMSQEEEDLVSRMHKLVGDRWELIAGRIPGRTAGEIERFWVMKN 74

[Close]

BLAST of GR408599 vs. TAIR peptide
Match: AT4G01060.1 (| Symbols: ETC3, CPL3 | CAPRICE-like MYB3 | chr4:460534-460967 FORWARD LENGTH=77)

HSP 1 Score: 92.4337 bits (228), Expect = 1.194e-19
Identity = 43/77 (55.84%), Postives = 58/77 (75.32%), Query Frame = 1

Query:   64 MEQHSQSKAKNNSSNTNINSQ--EVSSIEWEFIEMSEQEEDLIRRMYCLVGDRWNLIAGRIPGRKAEEIERFWIMRH 288
            M+ H ++K    +S    +S+  EVSS+EWE + MS++EEDL+ RM+ LVGDRW LIAGRIPGR A EIERFW+M++
Sbjct:    1 MDNHRRTKQPKTNSIVTSSSEGTEVSSLEWEVVNMSQEEEDLVSRMHKLVGDRWELIAGRIPGRTAGEIERFWVMKN 77

[Close]

BLAST of GR408599 vs. TAIR peptide
Match: AT5G52600.1 (| Symbols: AtMYB82, MYB82 | myb domain protein 82 | chr5:21343197-21343968 REVERSE LENGTH=201)

HSP 1 Score: 55.4546 bits (132), Expect = 1.617e-8
Identity = 23/39 (58.97%), Postives = 32/39 (82.05%), Query Frame = 1

Query:  160 MSEQEEDLIRRMYCLVGDRWNLIAGRIPGRKAEEIERFW 276
            MS QE+DLI RM+ L+G+RW+LIAGR+PGR   E++ +W
Sbjct:   70 MSPQEQDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYW 108

The following BLAST results are available for this feature:

BLAST of GR408599 vs. SwissProt
BLAST of GR408599 vs. TrEMBL
BLAST of GR408599 vs. TAIR peptide

BLAST of GR408599 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 4


Match Name	E-value	Identity	Description
TRY_ARATH	5.326e-23	69.01	Transcription factor TRY OS=Arabidopsis thaliana G...	[more]
CPC_ARATH	1.312e-21	53.68	Transcription factor CPC OS=Arabidopsis thaliana G...	[more]
MYB82_ARATH	1.408e-7	58.97	Transcription factor MYB82 OS=Arabidopsis thaliana...	[more]
MYB5_ARATH	9.128e-7	56.41	Transcription repressor MYB5 OS=Arabidopsis thalia...	[more]

BLAST of GR408599 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
B9GQZ8_POPTR	5.859e-25	70.51	Predicted protein (Fragment) OS=Populus trichocarp...	[more]
B9I8W0_POPTR	1.705e-24	65.52	Predicted protein OS=Populus trichocarpa GN=MYB217...	[more]
B9SBK5_RICCO	2.226e-24	77.46	Triptychon and cpc, putative OS=Ricinus communis G...	[more]
B9I543_POPTR	2.908e-24	67.47	Predicted protein OS=Populus trichocarpa GN=MYB144...	[more]
A5CBT5_VITVI	1.105e-23	66.67	Putative uncharacterized protein OS=Vitis vinifera...	[more]
B9N984_POPTR	2.084e-22	63.75	Predicted protein OS=Populus trichocarpa GN=MYB179...	[more]
D7MWK3_ARALY	2.722e-22	63.10	Predicted protein OS=Arabidopsis lyrata subsp. lyr...	[more]
D7MSV5_ARALY	4.642e-22	56.18	Putative uncharacterized protein OS=Arabidopsis ly...	[more]
D7LC50_ARALY	1.034e-21	61.90	Myb family transcription factor OS=Arabidopsis lyr...	[more]
B9RIL7_RICCO	1.034e-21	68.06	Triptychon and cpc, putative OS=Ricinus communis G...	[more]

BLAST of GR408599 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 10


Match Name	E-value	Identity	Description
AT5G53200.1	6.116e-24	69.01	\| Symbols: TRY \| Homeodomain-like superfamily prot...	[more]
AT2G30420.1	2.324e-23	70.00	\| Symbols: ETC2 \| Homeodomain-like superfamily pro...	[more]
AT2G46410.1	1.507e-22	53.68	\| Symbols: CPC \| Homeodomain-like superfamily prot...	[more]
AT4G01060.3	3.711e-21	57.33	\| Symbols: ETC3, CPL3 \| CAPRICE-like MYB3 \| chr4:4...	[more]
AT2G30432.1	4.846e-21	71.88	\| Symbols: TCL1 \| Homeodomain-like superfamily pro...	[more]
AT1G01380.1	1.410e-20	61.33	\| Symbols: ETC1 \| Homeodomain-like superfamily pro...	[more]
AT2G30424.1	5.358e-20	57.89	\| Symbols: TCL2 \| Homeodomain-like superfamily pro...	[more]
AT4G01060.2	6.998e-20	60.53	\| Symbols: ETC3, CPL3 \| CAPRICE-like MYB3 \| chr4:4...	[more]
AT4G01060.1	1.194e-19	55.84	\| Symbols: ETC3, CPL3 \| CAPRICE-like MYB3 \| chr4:4...	[more]
AT5G52600.1	1.617e-8	58.97	\| Symbols: AtMYB82, MYB82 \| myb domain protein 82 ...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT domain, DNA binding	SMART	SM00717	no description	coord: 50..98 score: 0.
IPR012287	Homeodomain-related	GENE3D	1.10.10.60	no description	coord: 55..93 score: 2.4
IPR015495	Myb transcription factor	PANTHER	PTHR10641	MYB-RELATED	coord: 53..104 score: 8
None	No IPR available	PANTHER	PTHR10641:SF26	TRIPTYCHON AND CPC	coord: 53..104 score: 8

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>GR408599 ID=GR408599; Name=GR408599; organism=Cicer arietinum; type=EST; length=468bp
GGCATCATTATTCAACAAAATTTCAACGTTTGTTTCAATAACCACCCTAG
CAGCTACTTTAATATGGAACAACATTCCCAAAGTAAGGCGAAGAACAACT
CCTCCAACACAAATATAAACTCTCAAGAGGTGAGCAGCATTGAATGGGAA
TTCATAGAGATGAGCGAACAAGAAGAGGATCTCATTCGTAGGATGTACTG
CTTAGTTGGAGATAGGTGGAATTTGATAGCAGGTCGTATTCCAGGTCGTA
AAGCAGAAGAAATAGAGAGATTCTGGATTATGAGACATACTGATGCTTTT
TCTGCCAAAAGAAGTGAACGAAAATCAAATTAAAGGCTCATGATTTTATA
TAAACTTTGTGATGGTTTTTTCAGAATTATTAATTTGTATTAAACCTCTC
AACGTGTCACTTCTATCCCTCACAGTAGCTATATTAAAAGAGTTTGTGTT
TTACTAGCTAGTTTTGTC

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0045449	regulation of transcription

Vocabulary: **INTERPRO**
Term	Definition
IPR001005	SANT/Myb
IPR012287	Homeodomain-related
IPR015495	Myb-like_TF

Search form