GR914584

EST Overview


Name	GR914584
Unique Name	GR914584
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	390

Libraries


Library Name	Type
LIBEST_024968 Early immune responsive suppression subtracted cDNA libraries of Chickpea (Cicer arietinum cv. JG-62) wilt	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

[Close]

BLAST of GR914584 vs. SwissProt
Match: CB23_SOLLC (Chlorophyll a-b binding protein 13, chloroplastic OS=Solanum lycopersicum GN=CAB13 PE=1 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 4.706e-45
Identity = 90/115 (78.26%), Postives = 96/115 (83.48%), Query Frame = 2

Query:   50 MAATQAHTVV--NNPFLGQRKGASAILLRCCAMGTSXFTMGNELWYGPDRVKYLGPFSAQTPSYLTGEFPGNYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLE 388
            MAAT + T V    PFLGQ K A+  L    AMG++ FTM N+LWYGPDRVKYLGPFSAQTPSYL GEFPG+YGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCI PEVLE
Sbjct:    4 MAATASSTTVVKATPFLGQTKNANP-LRDVVAMGSARFTMSNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCIFPEVLE 117

[Close]

BLAST of GR914584 vs. SwissProt
Match: CB23_HORVU (Chlorophyll a-b binding protein of LHCII type III, chloroplastic OS=Hordeum vulgare GN=LHBC PE=2 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 3.372e-43
Identity = 86/116 (74.14%), Postives = 94/116 (81.03%), Query Frame = 2

Query:   47 LMAATQAHTVVNNPFL-GQRKGASAILLRCCAMGTSX-FTMGNELWYGPDRVKYLGPFSAQTPSYLTGEFPGNYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLE 388
            +MAA     V   PFL GQ + ASA  LR  A  T+   TMGN+LWYGPDRVKYLGPFSAQTPSYL GEFPG+YGWDTAGLSADPEAFA+NRALEVIHGRWAMLGALGC+ PEVL+
Sbjct:    5 IMAAASRAVVAKTPFLSGQGRAASASPLRDIAAATNGRITMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCVFPEVLQ 120

[Close]

BLAST of GR914584 vs. SwissProt
Match: CB22_HORVU (Chlorophyll a-b binding protein 2, chloroplastic OS=Hordeum vulgare GN=CAB2 PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 2.422e-33
Identity = 61/70 (87.14%), Postives = 66/70 (94.29%), Query Frame = 2

Query:  176 WYGPDRVKYLGPFSAQTPSYLTGEFPGNYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVL 385
            WYGPDRVKYLGPFS ++PSYLTGEFPG+YGWDTAGLSADPE FAKNR LEVIHGRWAMLGALGC+ PE+L
Sbjct:   48 WYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHGRWAMLGALGCVFPELL 117

[Close]

BLAST of GR914584 vs. SwissProt
Match: CB22_PEA (Chlorophyll a-b binding protein AB80, chloroplastic OS=Pisum sativum GN=AB80 PE=1 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 5.396e-33
Identity = 65/96 (67.71%), Postives = 75/96 (78.12%), Query Frame = 2

Query:   98 QRKGASAILLRCCAMGTSXFTMGNELWYGPDRVKYLGPFSAQTPSYLTGEFPGNYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVL 385
            Q  GA+   +R  A      + G+  WYGPDRVKYLGPFS ++PSYLTGEFPG+YGWDTAGLSADPE F+KNR LEVIH RWAMLGALGC+ PE+L
Sbjct:   28 QELGAARFTMRKSATTKKVASSGSP-WYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELL 122

[Close]

BLAST of GR914584 vs. SwissProt
Match: CB21_TOBAC (Chlorophyll a-b binding protein 16, chloroplastic OS=Nicotiana tabacum GN=CAB16 PE=2 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 7.048e-33
Identity = 68/115 (59.13%), Postives = 81/115 (70.43%), Query Frame = 2

Query:   71 TVVNNPFLGQR----------KGASAILLRCCAMGTSXFTMGNELWYGPDRVKYLGPFSAQTPSYLTGEFPGNYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVL 385
            T +++PF G+            G   + +R  A      + G+  WYGPDRVKYLGPFS ++PSYLTGEFPG+YGWDTAGLSADPE FAKNR LEVIH RWAMLGALGC+ PE+L
Sbjct:    6 TALSSPFAGKAVKLSPSSSEVTGNGKVTMRKTASKAKPVSSGSP-WYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 119

[Close]

BLAST of GR914584 vs. SwissProt
Match: CB25_NICPL (Chlorophyll a-b binding protein E, chloroplastic OS=Nicotiana plumbaginifolia GN=CABE PE=3 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 9.205e-33
Identity = 68/115 (59.13%), Postives = 81/115 (70.43%), Query Frame = 2

Query:   71 TVVNNPFLGQR----------KGASAILLRCCAMGTSXFTMGNELWYGPDRVKYLGPFSAQTPSYLTGEFPGNYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVL 385
            T +++PF G+            G   + +R  A      + G+  WYGPDRVKYLGPFS ++PSYLTGEFPG+YGWDTAGLSADPE FAKNR LEVIH RWAMLGALGC+ PE+L
Sbjct:    6 TALSSPFAGKAVKLSPSSSEVTGNGKVTMRKTANKAKPVSSGSP-WYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 119

[Close]

BLAST of GR914584 vs. SwissProt
Match: CB23_ORYSJ (Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa subsp. japonica GN=RCABP89 PE=2 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 9.205e-33
Identity = 60/71 (84.51%), Postives = 65/71 (91.55%), Query Frame = 2

Query:  173 LWYGPDRVKYLGPFSAQTPSYLTGEFPGNYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVL 385
            +WYGPDR KYLGPFS QTPSYLTGEFPG+YGWDTAGLSADPE FA+NR LEVIH RWAMLGALGC+ PE+L
Sbjct:   46 IWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEIL 116

[Close]

BLAST of GR914584 vs. SwissProt
Match: CB23_ORYSI (Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa subsp. indica GN=OsI_012078 PE=2 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 9.205e-33
Identity = 60/71 (84.51%), Postives = 65/71 (91.55%), Query Frame = 2

Query:  173 LWYGPDRVKYLGPFSAQTPSYLTGEFPGNYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVL 385
            +WYGPDR KYLGPFS QTPSYLTGEFPG+YGWDTAGLSADPE FA+NR LEVIH RWAMLGALGC+ PE+L
Sbjct:   46 IWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEIL 116

[Close]

BLAST of GR914584 vs. SwissProt
Match: CB24_TOBAC (Chlorophyll a-b binding protein 40, chloroplastic OS=Nicotiana tabacum GN=CAB40 PE=2 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 1.202e-32
Identity = 65/101 (64.36%), Postives = 76/101 (75.25%), Query Frame = 2

Query:   83 NPFLGQRKGASAILLRCCAMGTSXFTMGNELWYGPDRVKYLGPFSAQTPSYLTGEFPGNYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVL 385
            +P   +  G   + +R  A      + G+  WYGPDRVKYLGPFS ++PSYLTGEFPG+YGWDTAGLSADPE FAKNR LEVIH RWAMLGALGC+ PE+L
Sbjct:   21 SPSSSEITGNGKVTMRKTASKAKTVSSGSP-WYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120

[Close]

BLAST of GR914584 vs. SwissProt
Match: CB2G_SOLLC (Chlorophyll a-b binding protein 3C, chloroplastic OS=Solanum lycopersicum GN=CAB3C PE=3 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 1.570e-32
Identity = 65/101 (64.36%), Postives = 76/101 (75.25%), Query Frame = 2

Query:   83 NPFLGQRKGASAILLRCCAMGTSXFTMGNELWYGPDRVKYLGPFSAQTPSYLTGEFPGNYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVL 385
            +P   +  G   + +R  A      + G+  WYGPDRVKYLGPFS ++PSYLTGEFPG+YGWDTAGLSADPE FAKNR LEVIH RWAMLGALGC+ PE+L
Sbjct:   21 SPSSSEITGNGRVTMRKTATKAKPASSGSP-WYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120

[Close]

BLAST of GR914584 vs. TrEMBL
Match: B1P0S0_MEDFA (Chloroplast chlorophyll-a/b binding protein OS=Medicago falcata GN=CAB PE=2 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 1.528e-49
Identity = 99/116 (85.34%), Postives = 101/116 (87.07%), Query Frame = 2

Query:   47 LMAAT--QAHTVVNNPFLGQRKGASAILLRCCAMGTSXFTMGNELWYGPDRVKYLGPFSAQTPSYLTGEFPGNYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLE 388
            LMAAT   A  V   PFLGQRKGA+  L    AMGTS FTMGNELWYGPDRVKYLGPFSAQTPSYLTGEFPG+YGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLE
Sbjct:    3 LMAATASSAAVVKQTPFLGQRKGAANPLRDVVAMGTSRFTMGNELWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLE 118

[Close]

BLAST of GR914584 vs. TrEMBL
Match: C6T868_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 6.421e-48
Identity = 94/115 (81.74%), Postives = 101/115 (87.83%), Query Frame = 2

Query:   47 LMAATQAHTVVNNPFLGQRKGASAILLR-CCAMGTSXFTMGNELWYGPDRVKYLGPFSAQTPSYLTGEFPGNYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLE 388
            LMAAT + T+   PFLGQ KGA+A  LR   +MGT  +TMGN+LWYGPDRVKYLGPFSAQTPSYL GEFPG+YGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLE
Sbjct:    5 LMAATSSGTLKATPFLGQGKGANANALRDVVSMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLE 119

[Close]

BLAST of GR914584 vs. TrEMBL
Match: Q04918_PEA (Chlorophyll a/b-binding protein OS=Pisum sativum GN=Lhcb3*1 PE=2 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 3.187e-47
Identity = 96/116 (82.76%), Postives = 100/116 (86.21%), Query Frame = 2

Query:   47 LMAAT--QAHTVVNNPFLGQRKGASAILLRCCAMGTSXFTMGNELWYGPDRVKYLGPFSAQTPSYLTGEFPGNYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLE 388
            LMAAT   A  V   PFLGQRK A+  L    AMGTS FTMGN+LWYGPDRVKYLGPFSAQTPSYLTGEFPG+YGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVL+
Sbjct:    3 LMAATASSATVVKQTPFLGQRKSANP-LRDVVAMGTSKFTMGNDLWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLQ 117

[Close]

BLAST of GR914584 vs. TrEMBL
Match: C6TKW2_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 1.582e-46
Identity = 91/115 (79.13%), Postives = 99/115 (86.09%), Query Frame = 2

Query:   47 LMAATQAHTVVNNPFLGQRKGASAILLR-CCAMGTSXFTMGNELWYGPDRVKYLGPFSAQTPSYLTGEFPGNYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLE 388
            + A T + T+   PFLGQ KGA+A  LR   +MGT  +TMGN+LWYGPDRVKYLGPFSAQTPSYL GEFPG+YGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLE
Sbjct:    6 MAATTSSGTLKATPFLGQGKGANANALRDVVSMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLE 120

[Close]

BLAST of GR914584 vs. TrEMBL
Match: Q5I8X1_PEA (Light-harvesting chlorophyll-a/b binding protein Lhcb3 OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 3.523e-46
Identity = 91/111 (81.98%), Postives = 96/111 (86.49%), Query Frame = 2

Query:   56 ATQAHTVVNNPFLGQRKGASAILLRCCAMGTSXFTMGNELWYGPDRVKYLGPFSAQTPSYLTGEFPGNYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLE 388
            A+ A  V   PFLGQRK A+  L    AMGT  FTMGN+LWYGPDRVKYLGPFSAQTPSYLTGEFPG+YGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVL+
Sbjct:    8 ASSATVVKQTPFLGQRKSANP-LRDVVAMGTPKFTMGNDLWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLQ 117

[Close]

BLAST of GR914584 vs. TrEMBL
Match: A5BW14_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_001096 PE=4 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 1.480e-44
Identity = 90/117 (76.92%), Postives = 99/117 (84.62%), Query Frame = 2

Query:   47 LMAATQAHTVVNNP--FLGQRKGASAILLR-CCAMGTSXFTMGNELWYGPDRVKYLGPFSAQTPSYLTGEFPGNYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLE 388
            +MAAT + +    P  F+GQ +G++A  LR    MGT  FTMGNELWYGPDRVKYLGPFSAQTPSYLTGEFPG+YGWDTAGLSADPEAFA+NRALEVIHGRWAMLGA GCITPEVLE
Sbjct:    5 VMAATASSSTGLRPTQFVGQTRGSNANQLREVVPMGTGKFTMGNELWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGAFGCITPEVLE 121

[Close]

BLAST of GR914584 vs. TrEMBL
Match: A6H5B7_VIGUN (Putative LHCII type III chlorophyll a/b binding protein (Fragment) OS=Vigna unguiculata GN=CipLhcb3 PE=2 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 1.933e-44
Identity = 91/116 (78.45%), Postives = 97/116 (83.62%), Query Frame = 2

Query:   47 LMAATQAHTVV--NNPFLGQRKGASAILLR-CCAMGTSXFTMGNELWYGPDRVKYLGPFSAQTPSYLTGEFPGNYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVL 385
            LMAAT     V    PFLGQ KGA+A  LR   +MGT  +TM N+LWYGPDRVKYLGPFSAQTPSYL GEFPG+YGWDTAGLSADPEAFAKNRALEVIHGRWA+LGALGCITPEVL
Sbjct:    5 LMAATSGSGTVLKPTPFLGQGKGANANPLRDAVSMGTGKYTMSNDLWYGPDRVKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWALLGALGCITPEVL 120

[Close]

BLAST of GR914584 vs. TrEMBL
Match: Q9SDT2_DAUCA (Chlorophyll a/b-binding protein OS=Daucus carota GN=cab3 PE=2 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 7.347e-44
Identity = 88/114 (77.19%), Postives = 95/114 (83.33%), Query Frame = 2

Query:   50 MAATQAHTVVNNPFLGQRKGASAILLR-CCAMGTSXFTMGNELWYGPDRVKYLGPFSAQTPSYLTGEFPGNYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLE 388
            MAA+ +  V   PFLG  K  +A  LR   +MG   FTMG++LWYGPDRVKYLGPFSAQTPSYLTGEFPG+YGWDTAGLSADPEAFAKNRALEVIHGRWAMLGA GCITPEVLE
Sbjct:    3 MAASSSTVVRATPFLGLTKATNANPLRDVVSMGPGKFTMGSDLWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGAFGCITPEVLE 116

[Close]

BLAST of GR914584 vs. TrEMBL
Match: C5XBK1_SORBI (Putative uncharacterized protein Sb02g036380 OS=Sorghum bicolor GN=Sb02g036380 PE=4 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 1.253e-43
Identity = 90/116 (77.59%), Postives = 95/116 (81.90%), Query Frame = 2

Query:   47 LMAATQAHTVVNNPFLGQ-RKGASAILLRCCAMGTSX-FTMGNELWYGPDRVKYLGPFSAQTPSYLTGEFPGNYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLE 388
            +MAAT        PFLGQ R  A+A  LR  A   S   TMGN+LWYGPDRVKYLGPFSAQTPSYLTGEFPG+YGWDTAGLSADPEAFA+NRALEVIHGRWAMLGALGCITPEVLE
Sbjct:    5 IMAATSRVVAAKTPFLGQGRAAANASPLRDVAAAASGRITMGNDLWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCITPEVLE 120

[Close]

BLAST of GR914584 vs. TrEMBL
Match: B9SID9_RICCO (Chlorophyll A/B binding protein, putative OS=Ricinus communis GN=RCOM_1254540 PE=4 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 1.637e-43
Identity = 87/116 (75.00%), Postives = 96/116 (82.76%), Query Frame = 2

Query:   47 LMAATQAHTVV--NNPFLGQRKGASAILLRCCAMGTSXFTMGNELWYGPDRVKYLGPFSAQTPSYLTGEFPGNYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLE 388
            +MAAT + + V    PFLGQR  ++  L    +MG   + MGNELWYGPDRVKYLGPFSAQTPSYL GEFPG+YGWDTAGLSADPEAFA+NRALEVIHGRWAMLGALGCITPEVLE
Sbjct:    5 VMAATASSSSVLRPTPFLGQRGSSANPLKDVVSMGNGKYIMGNELWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCITPEVLE 120

[Close]

BLAST of GR914584 vs. TAIR peptide
Match: AT5G54270.1 (| Symbols: LHCB3, LHCB3*1 | light-harvesting chlorophyll B-binding protein 3 | chr5:22038424-22039383 FORWARD LENGTH=265)

HSP 1 Score: 171.785 bits (434), Expect = 9.768e-44
Identity = 81/101 (80.20%), Postives = 89/101 (88.12%), Query Frame = 2

Query:   89 FLGQRKGASAILLR-CCAMGTSXFTMGNELWYGPDRVKYLGPFSAQTPSYLTGEFPGNYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLE 388
            FLGQ K +S   LR   ++G+  +TMGN+LWYGPDRVKYLGPFS QTPSYLTGEFPG+YGWDTAGLSADPEAFAKNRALEVIHGRWAMLGA GCITPEVL+
Sbjct:   17 FLGQTKASSFNPLRDVVSLGSPKYTMGNDLWYGPDRVKYLGPFSVQTPSYLTGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGAFGCITPEVLQ 117

[Close]

BLAST of GR914584 vs. TAIR peptide
Match: AT3G27690.1 (| Symbols: LHCB2.4, LHCB2.3, LHCB2 | photosystem II light harvesting complex gene 2.3 | chr3:10256002-10256921 FORWARD LENGTH=266)

HSP 1 Score: 137.887 bits (346), Expect = 1.563e-33
Identity = 64/98 (65.31%), Postives = 71/98 (72.45%), Query Frame = 2

Query:   92 LGQRKGASAILLRCCAMGTSXFTMGNELWYGPDRVKYLGPFSAQTPSYLTGEFPGNYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVL 385
            +G   G   I++R     T        +WYGPDR KYLGPFS  TPSYLTGE+PG+YGWDTAGLSADPE FAKNR LEVIH RWAMLGALGC  PE+L
Sbjct:   27 IGASNGGGRIIMRRTVKSTP-----QSIWYGPDRPKYLGPFSENTPSYLTGEYPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCTFPEIL 119

[Close]

BLAST of GR914584 vs. TAIR peptide
Match: AT2G05070.1 (| Symbols: LHCB2.2, LHCB2 | photosystem II light harvesting complex gene 2.2 | chr2:1799436-1800329 REVERSE LENGTH=265)

HSP 1 Score: 136.346 bits (342), Expect = 4.548e-33
Identity = 67/113 (59.29%), Postives = 78/113 (69.03%), Query Frame = 2

Query:   74 VVNNPFLGQR--KGASAILLRCCAMGTSXFTMGN-------ELWYGPDRVKYLGPFSAQTPSYLTGEFPGNYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVL 385
            +  + F GQ   K +S ++ +   +G    TM          +WYGPDR KYLGPFS  TPSYLTGE+PG+YGWDTAGLSADPE FAKNR LEVIH RWAMLGALGC  PE+L
Sbjct:    6 IQQSSFAGQTALKPSSDLIQKVGVLGGGRVTMRRTVKSTPQSIWYGPDRPKYLGPFSENTPSYLTGEYPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCTFPEIL 118

[Close]

BLAST of GR914584 vs. TAIR peptide
Match: AT2G05100.1 (| Symbols: LHCB2.1, LHCB2 | photosystem II light harvesting complex gene 2.1 | chr2:1823449-1824331 REVERSE LENGTH=265)

HSP 1 Score: 135.191 bits (339), Expect = 1.013e-32
Identity = 59/71 (83.10%), Postives = 63/71 (88.73%), Query Frame = 2

Query:  173 LWYGPDRVKYLGPFSAQTPSYLTGEFPGNYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVL 385
            +WYGPDR KYLGPFS  TPSYLTGE+PG+YGWDTAGLSADPE FAKNR LEVIH RWAMLGALGC  PE+L
Sbjct:   48 IWYGPDRPKYLGPFSENTPSYLTGEYPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCTFPEIL 118

[Close]

BLAST of GR914584 vs. TAIR peptide
Match: AT1G29930.1 (| Symbols: CAB1, AB140, CAB140, LHCB1.3 | chlorophyll A/B binding protein 1 | chr1:10478071-10478874 FORWARD LENGTH=267)

HSP 1 Score: 134.035 bits (336), Expect = 2.257e-32
Identity = 58/70 (82.86%), Postives = 64/70 (91.43%), Query Frame = 2

Query:  176 WYGPDRVKYLGPFSAQTPSYLTGEFPGNYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVL 385
            WYG DRVKYLGPFS ++PSYLTGEFPG+YGWDTAGLSADPE FA+NR LEVIH RWAMLGALGC+ PE+L
Sbjct:   50 WYGSDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELL 119

[Close]

BLAST of GR914584 vs. TAIR peptide
Match: AT1G29920.1 (| Symbols: CAB2, AB165, LHCB1.1 | chlorophyll A/B-binding protein 2 | chr1:10475089-10475892 REVERSE LENGTH=267)

HSP 1 Score: 134.035 bits (336), Expect = 2.257e-32
Identity = 58/70 (82.86%), Postives = 64/70 (91.43%), Query Frame = 2

Query:  176 WYGPDRVKYLGPFSAQTPSYLTGEFPGNYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVL 385
            WYG DRVKYLGPFS ++PSYLTGEFPG+YGWDTAGLSADPE FA+NR LEVIH RWAMLGALGC+ PE+L
Sbjct:   50 WYGSDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELL 119

[Close]

BLAST of GR914584 vs. TAIR peptide
Match: AT1G29910.1 (| Symbols: CAB3, AB180, LHCB1.2 | chlorophyll A/B binding protein 3 | chr1:10472443-10473246 REVERSE LENGTH=267)

HSP 1 Score: 134.035 bits (336), Expect = 2.257e-32
Identity = 58/70 (82.86%), Postives = 64/70 (91.43%), Query Frame = 2

Query:  176 WYGPDRVKYLGPFSAQTPSYLTGEFPGNYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVL 385
            WYG DRVKYLGPFS ++PSYLTGEFPG+YGWDTAGLSADPE FA+NR LEVIH RWAMLGALGC+ PE+L
Sbjct:   50 WYGSDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELL 119

[Close]

BLAST of GR914584 vs. TAIR peptide
Match: AT2G34420.1 (| Symbols: LHB1B2, LHCB1.5 | photosystem II light harvesting complex gene B1B2 | chr2:14522716-14523513 REVERSE LENGTH=265)

HSP 1 Score: 133.265 bits (334), Expect = 3.850e-32
Identity = 58/70 (82.86%), Postives = 63/70 (90.00%), Query Frame = 2

Query:  176 WYGPDRVKYLGPFSAQTPSYLTGEFPGNYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVL 385
            WYG DRVKYLGPFS + PSYLTGEFPG+YGWDTAGLSADPE FA+NR LEVIH RWAMLGALGC+ PE+L
Sbjct:   48 WYGSDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELL 117

[Close]

BLAST of GR914584 vs. TAIR peptide
Match: AT2G34430.1 (| Symbols: LHB1B1, LHCB1.4 | light-harvesting chlorophyll-protein complex II subunit B1 | chr2:14524818-14525618 FORWARD LENGTH=266)

HSP 1 Score: 133.265 bits (334), Expect = 3.850e-32
Identity = 58/70 (82.86%), Postives = 63/70 (90.00%), Query Frame = 2

Query:  176 WYGPDRVKYLGPFSAQTPSYLTGEFPGNYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVL 385
            WYG DRVKYLGPFS + PSYLTGEFPG+YGWDTAGLSADPE FA+NR LEVIH RWAMLGALGC+ PE+L
Sbjct:   49 WYGSDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELL 118

[Close]

BLAST of GR914584 vs. TAIR peptide
Match: AT1G76570.1 (| Symbols: | Chlorophyll A-B binding family protein | chr1:28729132-28730754 FORWARD LENGTH=327)

HSP 1 Score: 82.4185 bits (202), Expect = 7.793e-17
Identity = 36/71 (50.70%), Postives = 45/71 (63.38%), Query Frame = 2

Query:  176 WYGPDRVKYLGPFSAQTPSYLTGEFPGNYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLE 388
            WYG +R ++ GP     P YLTGE PG+YG+D AGL  D   F K    E++H RWAML ALG + PEV +
Sbjct:  106 WYGKERPRWFGPIPYDYPPYLTGELPGDYGFDIAGLGKDRLTFDKYFNFEILHARWAMLAALGALIPEVFD 176

The following BLAST results are available for this feature:

BLAST of GR914584 vs. SwissProt
BLAST of GR914584 vs. TrEMBL
BLAST of GR914584 vs. TAIR peptide

BLAST of GR914584 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
CB23_SOLLC	4.706e-45	78.26	Chlorophyll a-b binding protein 13, chloroplastic ...	[more]
CB23_HORVU	3.372e-43	74.14	Chlorophyll a-b binding protein of LHCII type III,...	[more]
CB22_HORVU	2.422e-33	87.14	Chlorophyll a-b binding protein 2, chloroplastic O...	[more]
CB22_PEA	5.396e-33	67.71	Chlorophyll a-b binding protein AB80, chloroplasti...	[more]
CB21_TOBAC	7.048e-33	59.13	Chlorophyll a-b binding protein 16, chloroplastic ...	[more]
CB25_NICPL	9.205e-33	59.13	Chlorophyll a-b binding protein E, chloroplastic O...	[more]
CB23_ORYSJ	9.205e-33	84.51	Chlorophyll a-b binding protein, chloroplastic OS=...	[more]
CB23_ORYSI	9.205e-33	84.51	Chlorophyll a-b binding protein, chloroplastic OS=...	[more]
CB24_TOBAC	1.202e-32	64.36	Chlorophyll a-b binding protein 40, chloroplastic ...	[more]
CB2G_SOLLC	1.570e-32	64.36	Chlorophyll a-b binding protein 3C, chloroplastic ...	[more]

BLAST of GR914584 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
B1P0S0_MEDFA	1.528e-49	85.34	Chloroplast chlorophyll-a/b binding protein OS=Med...	[more]
C6T868_SOYBN	6.421e-48	81.74	Putative uncharacterized protein OS=Glycine max PE...	[more]
Q04918_PEA	3.187e-47	82.76	Chlorophyll a/b-binding protein OS=Pisum sativum G...	[more]
C6TKW2_SOYBN	1.582e-46	79.13	Putative uncharacterized protein OS=Glycine max PE...	[more]
Q5I8X1_PEA	3.523e-46	81.98	Light-harvesting chlorophyll-a/b binding protein L...	[more]
A5BW14_VITVI	1.480e-44	76.92	Putative uncharacterized protein OS=Vitis vinifera...	[more]
A6H5B7_VIGUN	1.933e-44	78.45	Putative LHCII type III chlorophyll a/b binding pr...	[more]
Q9SDT2_DAUCA	7.347e-44	77.19	Chlorophyll a/b-binding protein OS=Daucus carota G...	[more]
C5XBK1_SORBI	1.253e-43	77.59	Putative uncharacterized protein Sb02g036380 OS=So...	[more]
B9SID9_RICCO	1.637e-43	75.00	Chlorophyll A/B binding protein, putative OS=Ricin...	[more]

BLAST of GR914584 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 10


Match Name	E-value	Identity	Description
AT5G54270.1	9.768e-44	80.20	\| Symbols: LHCB3, LHCB3*1 \| light-harvesting chlor...	[more]
AT3G27690.1	1.563e-33	65.31	\| Symbols: LHCB2.4, LHCB2.3, LHCB2 \| photosystem I...	[more]
AT2G05070.1	4.548e-33	59.29	\| Symbols: LHCB2.2, LHCB2 \| photosystem II light h...	[more]
AT2G05100.1	1.013e-32	83.10	\| Symbols: LHCB2.1, LHCB2 \| photosystem II light h...	[more]
AT1G29930.1	2.257e-32	82.86	\| Symbols: CAB1, AB140, CAB140, LHCB1.3 \| chloroph...	[more]
AT1G29920.1	2.257e-32	82.86	\| Symbols: CAB2, AB165, LHCB1.1 \| chlorophyll A/B-...	[more]
AT1G29910.1	2.257e-32	82.86	\| Symbols: CAB3, AB180, LHCB1.2 \| chlorophyll A/B ...	[more]
AT2G34420.1	3.850e-32	82.86	\| Symbols: LHB1B2, LHCB1.5 \| photosystem II light ...	[more]
AT2G34430.1	3.850e-32	82.86	\| Symbols: LHB1B1, LHCB1.4 \| light-harvesting chlo...	[more]
AT1G76570.1	7.793e-17	50.70	\| Symbols: \| Chlorophyll A-B binding family prote...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001344	Chlorophyll A-B binding protein, plant	PANTHER	PTHR21649	CHLOROPHYLL A/B BINDING PROTEIN	coord: 12..123 score: 8.9
IPR022796	Chlorophyll A-B binding protein	PFAM	PF00504	Chloroa_b-bind	coord: 70..122 score: 9
None	No IPR available	GENE3D	1.10.3460.10	no description	coord: 61..123 score: 1.6
None	No IPR available	SUPERFAMILY	103511	Chlorophyll a-b binding protein	coord: 51..122 score: 1.6
None	No IPR available	SEG	seg	seg	coord: 2..15 score

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>GR914584 ID=GR914584; Name=GR914584; organism=Cicer arietinum; type=EST; length=390bp
GGTCCGGCCGAGGGAGTAACTAGTTTTCACTCACAAACAATATGGATTGA
TGGCAGCAACACAAGCTCACACTGTTGTAAACAATCCCTTCCTTGGACAA
AGGAAAGGTGCCAGTGCCATCCTCTTAAGATGTTGCGCCATGGGAACTTC
AAANTTCACCATGGGAAATGAATTGTGGTATGGACCAGACAGAGTGAAAT
ATTTAGGACCCTTTTCAGCTCAGACACCTTCATACTTAACTGGAGAATTC
CCAGGAAATTATGGATGGGACACTGCTGGTTTATCTGCTGATCCTGAAGC
ATTTGCCAAGAACAGAGCTCTTGAGGTGATCCATGGAAGATGGGCAATGC
TAGGAGCACTAGGTTGCATAACACCAGAAGTGTTAGAAAA

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane

Vocabulary: **INTERPRO**
Term	Definition
IPR001344	Chloro_AB-bd_pln
IPR022796	Chloroa_b-bind

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