HO062223

EST Overview
NameHO062223
Unique NameHO062223
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length710
Libraries
Library NameType
LIBEST_026408 Chickpea drought stressed cDNA SSH library AB1cdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Homology
BLAST of HO062223 vs. TrEMBL
Match: A2Q3R6_MEDTR (Poly(ADP-ribose) polymerase, catalytic region OS=Medicago truncatula GN=MtrDRAFT_AC155888g13v2 PE=4 SV=1)

HSP 1 Score: 54.299 bits (129), Expect = 7.187e-11
Identity = 27/63 (42.86%), Postives = 42/63 (66.67%), Query Frame = -2
Query:  254 FSHSFCAIKNRVHPRLMILLRAHYAQLKAKQISREDFVMKLRLIVGDNLIRAAIANLEFTGPP 442
            FS    +++N V   +M LL A YA L + +ISR D V+KLRLIV +N++++A+ N++   PP
Sbjct:  473 FSVLLSSLRNMVPSNIMFLLDAQYALLMSNKISRGDCVLKLRLIVANNVLKSAVYNVQSKRPP 535          

HSP 2 Score: 37.3502 bits (85), Expect = 7.187e-11
Identity = 20/45 (44.44%), Postives = 25/45 (55.56%), Query Frame = -1
Query:  528 DIDSPKLYVFGNRK*TLPIYPEFVLVPRPLWMREGNVCLNESKEK 662
            DI  PK YV  N      IYPEFV+  +     E N+C NESK++
Sbjct:  399 DIQCPKCYVVWNMNMNTHIYPEFVVSFKSPLGFEENICSNESKKQ 443          
BLAST of HO062223 vs. TAIR peptide
Match: AT1G32230.3 (| Symbols: AtRCD1 | WWE protein-protein interaction domain protein family | chr1:11613427-11615748 FORWARD LENGTH=570)

HSP 1 Score: 53.9138 bits (128), Expect = 1.006e-7
Identity = 27/62 (43.55%), Postives = 41/62 (66.13%), Query Frame = -2
Query:  269 PLGAFSHSFCAIKNRVHPRLMILLRAHYAQLKAKQISREDFVMKLRLIVGDNLIRAAIANLE 454
            P   F   F AI ++V    M+L+ A Y QL+ K+++R +FV KLR+IVGD+L+R+ I  L+
Sbjct:  505 PWMPFPTLFAAISHKVAENDMLLINADYQQLRDKKMTRAEFVRKLRVIVGDDLLRSTITTLQ 566          
BLAST of HO062223 vs. TAIR peptide
Match: AT1G32230.2 (| Symbols: RCD1, CEO, CEO1, ATP8, AtRCD1 | WWE protein-protein interaction domain protein family | chr1:11613427-11615894 FORWARD LENGTH=588)

HSP 1 Score: 53.9138 bits (128), Expect = 1.006e-7
Identity = 27/62 (43.55%), Postives = 41/62 (66.13%), Query Frame = -2
Query:  269 PLGAFSHSFCAIKNRVHPRLMILLRAHYAQLKAKQISREDFVMKLRLIVGDNLIRAAIANLE 454
            P   F   F AI ++V    M+L+ A Y QL+ K+++R +FV KLR+IVGD+L+R+ I  L+
Sbjct:  505 PWMPFPTLFAAISHKVAENDMLLINADYQQLRDKKMTRAEFVRKLRVIVGDDLLRSTITTLQ 566          
BLAST of HO062223 vs. TAIR peptide
Match: AT1G32230.1 (| Symbols: RCD1, CEO, CEO1, ATP8, AtRCD1 | WWE protein-protein interaction domain protein family | chr1:11613427-11615894 FORWARD LENGTH=589)

HSP 1 Score: 53.9138 bits (128), Expect = 1.006e-7
Identity = 27/62 (43.55%), Postives = 41/62 (66.13%), Query Frame = -2
Query:  269 PLGAFSHSFCAIKNRVHPRLMILLRAHYAQLKAKQISREDFVMKLRLIVGDNLIRAAIANLE 454
            P   F   F AI ++V    M+L+ A Y QL+ K+++R +FV KLR+IVGD+L+R+ I  L+
Sbjct:  506 PWMPFPTLFAAISHKVAENDMLLINADYQQLRDKKMTRAEFVRKLRVIVGDDLLRSTITTLQ 567          
The following BLAST results are available for this feature:
BLAST of HO062223 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 1
Match NameE-valueIdentityDescription
A2Q3R6_MEDTR7.187e-1142.86Poly(ADP-ribose) polymerase, catalytic region OS=M... [more]
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BLAST of HO062223 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 3
Match NameE-valueIdentityDescription
AT1G32230.31.006e-743.55| Symbols: AtRCD1 | WWE protein-protein interactio... [more]
AT1G32230.21.006e-743.55| Symbols: RCD1, CEO, CEO1, ATP8, AtRCD1 | WWE pro... [more]
AT1G32230.11.006e-743.55| Symbols: RCD1, CEO, CEO1, ATP8, AtRCD1 | WWE pro... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 42..54
score
NoneNo IPR availableSEGsegsegcoord: 23..36
score
IPR022003RST domain of plant C-terminalPFAMPF12174RSTcoord: 16..76
score: 3.5

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>HO062223 ID=HO062223; Name=HO062223; organism=Cicer arietinum; type=EST; length=710bp
CGGGCAGGTACCTCTGATCATCAGACATTTCAAAATAAACCATAATGAAG
TTCCAGTAGCAAACATGTACCACAATTCCAGATTCAAACTGGAAATTAGG
ACTATGAAATGAAATAAAAAAATAAAAAAGATAATTCTCCCAGGAGCAAA
CCATATCACAACTTGACGATAGTTAACTCCAAGTGAAAAATCTCCTCCTC
CTCATTAGAAAGCCTCAGCCTTTCTTCTTGTTTGAGCTTTATGATTCACC
ATTCGGTGGCCCCGTGAATTCAAGATTTGCTATCGCAGCTCTGATTAGAT
TATCTCCAACAATCAACCTCAGCTTCATCACAAAATCCTCGCGGGAAATC
TGCTTTGCCTTCAGTTGTGCATAATGTGCTCTGAGAAGAATCATAAGCCT
GGGATGAACCCTGTTTTTTATGGCACAAAAAGAATGGGAAAAGGCACCAA
GGGGATGATGGACCTTTTCGGGCAGGACACTATCAGCTTTTTCCAGTATT
CACTGTAAAGAGTTATGCTCAGAAACATTTTTCCTTACTCTCGTTTAAAC
AAACATTACCTTCCCGCATCCAGAGGGGCCTTGGAACTAACACAAATTCT
GGATAGATGGGGAGTGTTCATTTCCTATTTCCAAACACATAGAGTTTGGG
GGAATCAATGTCTCCACCCCATTATCTTTTCCCAACCCCTGGGGATGAAA
CTGATCCTGG
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: INTERPRO
TermDefinition
IPR022003RST