HO664209

EST Overview
NameHO664209
Unique NameHO664209
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length366
Libraries
Library NameType
LIBEST_026619 TDZ treated Chickpea SSH librarycdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Homology
BLAST of HO664209 vs. TrEMBL
Match: D5LXJ0_LOTJA (CIP73 protein OS=Lotus japonicus GN=CIP73 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 3.441e-17
Identity = 52/90 (57.78%), Postives = 61/90 (67.78%), Query Frame = 3
Query:   84 PVVGRFHRVGVSSGQANSEQRXXXXXXXXXXXXXTPESTLQRQNVEDSARNGTSSSPNTRQEPSNSRVVNINILSAGGPQNTQESDRQVP 353
            PV+GRF     SS   N+EQ              T E TL RQ++EDSARNGT  +PNT+QEPS+SRVVNINILSAGGP+N  ES+RQVP
Sbjct:  491 PVLGRFQ----SSVNTNNEQGSQPASQQHTAPHSTAEFTLHRQSMEDSARNGTLPTPNTQQEPSSSRVVNINILSAGGPEN-NESERQVP 575          
BLAST of HO664209 vs. TrEMBL
Match: B9T2N7_RICCO (Scythe/bat3, putative OS=Ricinus communis GN=RCOM_0510090 PE=4 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 7.932e-14
Identity = 46/111 (41.44%), Postives = 61/111 (54.95%), Query Frame = 3
Query:   21 VPVPLGRPSSEPSGNPAGLFHPVVGRFHRVG--VSSGQANSEQRXXXXXXXXXXXXXTPESTLQRQNVEDSARNGTSSSPNTRQEPSNSRVVNINILSAGGPQNTQESDRQ 347
            VP   GR  S+ S N  GLF+P++GRF  V   VS  + +                   E  +QR N E   R+G+  + N RQEPS++R +NINILSAGG QN+ ES+RQ
Sbjct:  479 VPGQFGRLPSDSSTNSIGLFYPLLGRFPHVASHVSGARGSQASGEHHPAGVQRDQQSISEPAVQRVNAEPRTRDGSLPNSNLRQEPSSTRSININILSAGGTQNSPESERQ 589          
BLAST of HO664209 vs. TrEMBL
Match: B9N6Y0_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_583635 PE=4 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 7.932e-14
Identity = 47/114 (41.23%), Postives = 62/114 (54.39%), Query Frame = 3
Query:   21 VPVPLGRPSSEPSGNPAGLFHPVVGRFHRVGV---SSGQANSEQRXXXXXXXXXXXXXTPESTLQRQNVEDSARNGTSSSPNTRQEPSNSRVVNINILSAGGPQNTQESDRQVP 353
            VP   GR  S+ SGN  GL++PV+GRF  V     + GQ +                 T E  + RQN E   R+G S  PN+RQEPS SR ++INILSA G QN  +S++ +P
Sbjct:  494 VPGTFGRLPSDSSGNSIGLYYPVLGRFQHVASGHGNGGQGSQASGEHHAAGVQTDQPPTLEPAVHRQNTEQRTRDG-SLPPNSRQEPSISRSISINILSASGSQNNLDSEQPIP 606          
The following BLAST results are available for this feature:
BLAST of HO664209 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 3
Match NameE-valueIdentityDescription
D5LXJ0_LOTJA3.441e-1757.78CIP73 protein OS=Lotus japonicus GN=CIP73 PE=2 SV=... [more]
B9T2N7_RICCO7.932e-1441.44Scythe/bat3, putative OS=Ricinus communis GN=RCOM_... [more]
B9N6Y0_POPTR7.932e-1441.23Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 49..61
score

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>HO664209 ID=HO664209; Name=HO664209; organism=Cicer arietinum; type=EST; length=366bp
TCGAGCGGCCGCCCGGGCAGGTTCCTGTTCCATTGGGCCGTCCTTCTTCA
GAACCATCCGGTAATCCTGCAGGGCTTTTCCATCCTGTTGTTGGGAGATT
TCACCGTGTAGGTGTAAGTTCAGGGCAGGCAAATAGTGAACAGAGATCTC
AATCAGCAAGTCAGCATCATGCGGCACAACATTCAACTCCTGAATCCACA
TTGCAAAGGCAAAATGTAGAAGACTCTGCAAGGAATGGGACCTCATCAAG
TCCAAACACGAGACAAGAGCCATCTAATTCTCGTGTTGTAAATATCAATA
TTCTGTCAGCTGGGGGACCCCAAAACACCCAAGAATCTGATAGACAGGTA
CCTCGGCCGCGACCAC
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