FE670674
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FE670674 vs. SwissProt
Match: CB24_PEA (Chlorophyll a-b binding protein P4, chloroplastic OS=Pisum sativum GN=lhcA-P4 PE=1 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 2.879e-26 Identity = 61/108 (56.48%), Postives = 71/108 (65.74%), Query Frame = -1 Query: 62 EFFLFPYVEIRGWRDT*NTRSVYPDLIF*RYSVRPNEVGYPGGAFYPLNFAPTLEGIERGHAPGRXXXXXXLGFIVLHNMTRAGPFDNILRHTFDPRHNTLFLTLSGD 385 EF L YVEIR W+D N SV D IF +YS+ EVGYPGG F PLNFAPTLE E+ A GR LGFI+ HN+T GPFDN+L+H DP HNT+ TL G+ Sbjct: 145 EFILSHYVEIRRWQDIKNPGSVNQDPIFKQYSLPAGEVGYPGGIFNPLNFAPTLEAKEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNLLQHISDPWHNTIVQTLGGN 252
BLAST of FE670674 vs. SwissProt
Match: CA4_ARATH (Chlorophyll a-b binding protein 4, chloroplastic OS=Arabidopsis thaliana GN=LHCA4 PE=1 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 7.092e-25 Identity = 58/106 (54.72%), Postives = 69/106 (65.09%), Query Frame = -1 Query: 68 EFFLFPYVEIRGWRDT*NTRSVYPDLIF*RYSVRPNEVGYPGGAFYPLNFAPTLEGIERGHAPGRXXXXXXLGFIVLHNMTRAGPFDNILRHTFDPRHNTLFLTLS 385 EF LF YVEIR W+D N SV D IF +YS+ EVGYPGG F PLNFAPT E E+ A GR LGF+V HN+T GPF+N+L+H DP HNT+ T + Sbjct: 146 EFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPKGEVGYPGGIFNPLNFAPTQEAKEKELANGRLAMLAFLGFVVQHNVTGKGPFENLLQHLSDPWHNTIVQTFN 251
BLAST of FE670674 vs. SwissProt
Match: CB120_HORVU (Chlorophyll a-b binding protein 1B-20, chloroplastic (Fragment) OS=Hordeum vulgare GN=LHC Ib-20 PE=1 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 1.384e-20 Identity = 53/101 (52.48%), Postives = 64/101 (63.37%), Query Frame = -1 Query: 65 YVEIRGWRDT*NTRSVYPDLIF*RYSVRPNEVGYPGGAFYPLNFAPTLEGIERGHAPGRXXXXXXLGFIVLHNMTRAGPFDNILRHTFDPRHNTLFLTLSG 367 YVEIR W+D N SV D IF YS+ P+E GYPG F PLNFAP LE E+ A GR LGF+V HN+ GPF+N+ +H DP HNT+ T+SG Sbjct: 131 YVEIRRWQDIKNPGSVNQDPIFKSYSLPPHECGYPGRVFNPLNFAP-LENKEKELANGRLAMLAFLGFLVQHNVHGKGPFENLQQHLADPWHNTIIQTISG 230
BLAST of FE670674 vs. TrEMBL
Match: B9RLX2_RICCO (Chlorophyll A/B binding protein, putative OS=Ricinus communis GN=RCOM_1471590 PE=4 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 1.651e-27 Identity = 63/108 (58.33%), Postives = 74/108 (68.52%), Query Frame = -1 Query: 62 EFFLFPYVEIRGWRDT*NTRSVYPDLIF*RYSVRPNEVGYPGGAFYPLNFAPTLEGIERGHAPGRXXXXXXLGFIVLHNMTRAGPFDNILRHTFDPRHNTLFLTLSGD 385 EF LF YVEIR W+D N SV D IF +YS+ PNEVGYPGG F PLNFAPTLE E+ A GR LGF++ HN+T GPFDN+L+H DP HNT+ T SG+ Sbjct: 144 EFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTLEAKEKELANGRLAMLAFLGFVIQHNVTGKGPFDNLLQHLSDPWHNTIIQTFSGN 251
BLAST of FE670674 vs. TrEMBL
Match: B5KU60_HELAN (Chloroplast chlorophyll a/b binding protein (Fragment) OS=Helianthus annuus GN=cab PE=4 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 3.679e-27 Identity = 64/108 (59.26%), Postives = 73/108 (67.59%), Query Frame = -1 Query: 62 EFFLFPYVEIRGWRDT*NTRSVYPDLIF*RYSVRPNEVGYPGGAFYPLNFAPTLEGIERGHAPGRXXXXXXLGFIVLHNMTRAGPFDNILRHTFDPRHNTLFLTLSGD 385 EF LF YVEIR W+D N SV D IF YS+ PNEVGYPGG F PLNFAPT E E+ A GR LGFIV HN+T GPFDN+L+H DP HNT+ T+SG+ Sbjct: 28 EFILFHYVEIRRWQDIKNPGSVNQDPIFKNYSLPPNEVGYPGGIFNPLNFAPTAEAKEKELANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHLSDPWHNTIVQTMSGN 135
BLAST of FE670674 vs. TrEMBL
Match: Q7XAC6_BETVU (Chlorophyll a /b binding protein OS=Beta vulgaris GN=cab11 PE=2 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.070e-26 Identity = 63/108 (58.33%), Postives = 72/108 (66.67%), Query Frame = -1 Query: 62 EFFLFPYVEIRGWRDT*NTRSVYPDLIF*RYSVRPNEVGYPGGAFYPLNFAPTLEGIERGHAPGRXXXXXXLGFIVLHNMTRAGPFDNILRHTFDPRHNTLFLTLSGD 385 EF LF YVEIR W+D N SV D IF +YS+ PNEVGYPGG F PLNFAPT E E+ A GR LGFIV HN+T GPFDN+L+H DP HNT+ T G+ Sbjct: 145 EFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTAEAKEKELANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHLSDPWHNTIIQTFGGN 252
BLAST of FE670674 vs. TrEMBL
Match: Q7M1K8_SOLLC (Chlorophyll a/b-binding protein (cab-12) OS=Solanum lycopersicum PE=4 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.070e-26 Identity = 64/106 (60.38%), Postives = 71/106 (66.98%), Query Frame = -1 Query: 68 EFFLFPYVEIRGWRDT*NTRSVYPDLIF*RYSVRPNEVGYPGGAFYPLNFAPTLEGIERGHAPGRXXXXXXLGFIVLHNMTRAGPFDNILRHTFDPRHNTLFLTLS 385 EF LF YVEIR W+D N SV D IF YS+ PNEVGYPGG F PLNFAPTLE E+ A GR LGFIV HN+T GPFDN+L+H DP HNT+ T S Sbjct: 144 EFILFHYVEIRRWQDIKNPGSVNQDPIFKSYSLPPNEVGYPGGIFNPLNFAPTLEAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIIQTFS 249
BLAST of FE670674 vs. TrEMBL
Match: D7SIA0_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_0.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00007988001 PE=4 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 1.398e-26 Identity = 64/107 (59.81%), Postives = 71/107 (66.36%), Query Frame = -1 Query: 65 EFFLFPYVEIRGWRDT*NTRSVYPDLIF*RYSVRPNEVGYPGGAFYPLNFAPTLEGIERGHAPGRXXXXXXLGFIVLHNMTRAGPFDNILRHTFDPRHNTLFLTLSG 385 EF LF YVEIR W+D N SV D IF YS+ PNEVGYPGG F PLNFAPT E E+ A GR LGFIV HN+T GPFDN+L+H DP HNT+ TL G Sbjct: 142 EFILFHYVEIRRWQDIKNPGSVNQDPIFKNYSLPPNEVGYPGGIFNPLNFAPTEEAKEKELANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIIQTLRG 248
BLAST of FE670674 vs. TrEMBL
Match: A5AEI0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_038035 PE=4 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 1.398e-26 Identity = 64/107 (59.81%), Postives = 71/107 (66.36%), Query Frame = -1 Query: 65 EFFLFPYVEIRGWRDT*NTRSVYPDLIF*RYSVRPNEVGYPGGAFYPLNFAPTLEGIERGHAPGRXXXXXXLGFIVLHNMTRAGPFDNILRHTFDPRHNTLFLTLSG 385 EF LF YVEIR W+D N SV D IF YS+ PNEVGYPGG F PLNFAPT E E+ A GR LGFIV HN+T GPFDN+L+H DP HNT+ TL G Sbjct: 145 EFILFHYVEIRRWQDIKNPGSVNQDPIFKNYSLPPNEVGYPGGIFNPLNFAPTEEAKEKELANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIIQTLRG 251
BLAST of FE670674 vs. TrEMBL
Match: Q1H8L9_SOLTU (Chlorophyll a/b binding protein OS=Solanum tuberosum GN=cab1 PE=2 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 3.115e-26 Identity = 63/106 (59.43%), Postives = 71/106 (66.98%), Query Frame = -1 Query: 68 EFFLFPYVEIRGWRDT*NTRSVYPDLIF*RYSVRPNEVGYPGGAFYPLNFAPTLEGIERGHAPGRXXXXXXLGFIVLHNMTRAGPFDNILRHTFDPRHNTLFLTLS 385 EF LF YVEIR W+D N SV D IF YS+ PN+ GYPGG F PLNFAPT E E+ A GR LGFIV HN+T GPFDN+L+H FDP HNT+ TLS Sbjct: 145 EFILFHYVEIRRWQDIKNPGSVNQDPIFKSYSLPPNKCGYPGGIFNPLNFAPTEEAKEKELANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHLFDPWHNTIIQTLS 250
BLAST of FE670674 vs. TrEMBL
Match: B7FJY9_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 3.115e-26 Identity = 63/107 (58.88%), Postives = 72/107 (67.29%), Query Frame = -1 Query: 65 EFFLFPYVEIRGWRDT*NTRSVYPDLIF*RYSVRPNEVGYPGGAFYPLNFAPTLEGIERGHAPGRXXXXXXLGFIVLHNMTRAGPFDNILRHTFDPRHNTLFLTLSG 385 EF LF YVEIR W+D N SV D IF +YS+ EVGYPGG F PLNFAPTLE E+ A GR LGFI+ HN+T GPFDN+L+H DP HNT+ TLSG Sbjct: 145 EFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPKGEVGYPGGIFNPLNFAPTLEAKEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNLLQHLSDPWHNTIVQTLSG 251
BLAST of FE670674 vs. TrEMBL
Match: A9PIX4_9ROSI (Putative uncharacterized protein OS=Populus trichocarpa x Populus deltoides PE=2 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 5.313e-26 Identity = 60/108 (55.56%), Postives = 72/108 (66.67%), Query Frame = -1 Query: 62 EFFLFPYVEIRGWRDT*NTRSVYPDLIF*RYSVRPNEVGYPGGAFYPLNFAPTLEGIERGHAPGRXXXXXXLGFIVLHNMTRAGPFDNILRHTFDPRHNTLFLTLSGD 385 EF LF YVEIR W+D N V D IF +YS+ PNE GYPGG F PLNFAPT+E E+ A GR LGF++ HN+T GPFDN+L+H DP HNT+ T SG+ Sbjct: 144 EFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTIEAKEKELANGRLAMLAFLGFVIQHNVTGKGPFDNLLQHISDPWHNTIVQTFSGN 251
BLAST of FE670674 vs. TrEMBL
Match: B9N4C4_POPTR (Light-harvesting complex I protein Lhca4 OS=Populus trichocarpa GN=Lhca4 PE=4 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 1.546e-25 Identity = 59/108 (54.63%), Postives = 72/108 (66.67%), Query Frame = -1 Query: 62 EFFLFPYVEIRGWRDT*NTRSVYPDLIF*RYSVRPNEVGYPGGAFYPLNFAPTLEGIERGHAPGRXXXXXXLGFIVLHNMTRAGPFDNILRHTFDPRHNTLFLTLSGD 385 EF LF YVEIR W+D N V D IF +YS+ PNE GYPGG F PLNFAPT+E E+ A GR LGF++ HN+T GPF+N+L+H DP HNT+ T SG+ Sbjct: 144 EFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTIEAKEKELANGRLAMLAFLGFVIQHNVTGKGPFENLLQHISDPWHNTIVQTFSGN 251
BLAST of FE670674 vs. TAIR peptide
Match: AT3G47470.1 (| Symbols: LHCA4, CAB4 | light-harvesting chlorophyll-protein complex I subunit A4 | chr3:17493622-17494773 REVERSE LENGTH=251) HSP 1 Score: 112.464 bits (280), Expect = 7.054e-26 Identity = 58/106 (54.72%), Postives = 69/106 (65.09%), Query Frame = -1 Query: 68 EFFLFPYVEIRGWRDT*NTRSVYPDLIF*RYSVRPNEVGYPGGAFYPLNFAPTLEGIERGHAPGRXXXXXXLGFIVLHNMTRAGPFDNILRHTFDPRHNTLFLTLS 385 EF LF YVEIR W+D N SV D IF +YS+ EVGYPGG F PLNFAPT E E+ A GR LGF+V HN+T GPF+N+L+H DP HNT+ T + Sbjct: 146 EFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPKGEVGYPGGIFNPLNFAPTQEAKEKELANGRLAMLAFLGFVVQHNVTGKGPFENLLQHLSDPWHNTIVQTFN 251
BLAST of FE670674 vs. TAIR peptide
Match: AT3G61470.1 (| Symbols: LHCA2 | photosystem I light harvesting complex gene 2 | chr3:22745736-22747032 FORWARD LENGTH=257) HSP 1 Score: 49.2914 bits (116), Expect = 7.334e-7 Identity = 35/108 (32.41%), Postives = 46/108 (42.59%), Query Frame = -1 Query: 80 EFFLFPYVEIRGWRDT*NTRSVYPDLIF*RYSVRPNEVGYPGGAFY-PLNF-----APTLEGIERGHAPGRXXXXXXLGFIVLHNMTRAGPFDNILRHTFDPRHNTLF 385 E L + E R W D SV D +F + +VGYPGG ++ PL + A E + GR +G H T GP DN+ H DP H T+F Sbjct: 144 ELILIGWAEGRRWADIIKPGSVNTDPVFPNNKLTGTDVGYPGGLWFDPLGWGSGSPAKLKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATIF 251 The following BLAST results are available for this feature:
BLAST of FE670674 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot) Total hits: 3
BLAST of FE670674 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl) Total hits: 10
BLAST of FE670674 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide) Total hits: 2
InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FE670674 ID=FE670674; Name=FE670674; organism=Cicer arietinum; type=EST; length=385bpback to top Annotated Terms
The
following terms have been associated with
this EST:
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