FE670674

EST Overview
NameFE670674
Unique NameFE670674
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length385
Libraries
Library NameType
LIBEST_022821 Chickpea leave librarycdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Homology
BLAST of FE670674 vs. SwissProt
Match: CB24_PEA (Chlorophyll a-b binding protein P4, chloroplastic OS=Pisum sativum GN=lhcA-P4 PE=1 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 2.879e-26
Identity = 61/108 (56.48%), Postives = 71/108 (65.74%), Query Frame = -1
Query:   62 EFFLFPYVEIRGWRDT*NTRSVYPDLIF*RYSVRPNEVGYPGGAFYPLNFAPTLEGIERGHAPGRXXXXXXLGFIVLHNMTRAGPFDNILRHTFDPRHNTLFLTLSGD 385
            EF L  YVEIR W+D  N  SV  D IF +YS+   EVGYPGG F PLNFAPTLE  E+  A GR      LGFI+ HN+T  GPFDN+L+H  DP HNT+  TL G+
Sbjct:  145 EFILSHYVEIRRWQDIKNPGSVNQDPIFKQYSLPAGEVGYPGGIFNPLNFAPTLEAKEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNLLQHISDPWHNTIVQTLGGN 252          
BLAST of FE670674 vs. SwissProt
Match: CA4_ARATH (Chlorophyll a-b binding protein 4, chloroplastic OS=Arabidopsis thaliana GN=LHCA4 PE=1 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 7.092e-25
Identity = 58/106 (54.72%), Postives = 69/106 (65.09%), Query Frame = -1
Query:   68 EFFLFPYVEIRGWRDT*NTRSVYPDLIF*RYSVRPNEVGYPGGAFYPLNFAPTLEGIERGHAPGRXXXXXXLGFIVLHNMTRAGPFDNILRHTFDPRHNTLFLTLS 385
            EF LF YVEIR W+D  N  SV  D IF +YS+   EVGYPGG F PLNFAPT E  E+  A GR      LGF+V HN+T  GPF+N+L+H  DP HNT+  T +
Sbjct:  146 EFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPKGEVGYPGGIFNPLNFAPTQEAKEKELANGRLAMLAFLGFVVQHNVTGKGPFENLLQHLSDPWHNTIVQTFN 251          
BLAST of FE670674 vs. SwissProt
Match: CB120_HORVU (Chlorophyll a-b binding protein 1B-20, chloroplastic (Fragment) OS=Hordeum vulgare GN=LHC Ib-20 PE=1 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 1.384e-20
Identity = 53/101 (52.48%), Postives = 64/101 (63.37%), Query Frame = -1
Query:   65 YVEIRGWRDT*NTRSVYPDLIF*RYSVRPNEVGYPGGAFYPLNFAPTLEGIERGHAPGRXXXXXXLGFIVLHNMTRAGPFDNILRHTFDPRHNTLFLTLSG 367
            YVEIR W+D  N  SV  D IF  YS+ P+E GYPG  F PLNFAP LE  E+  A GR      LGF+V HN+   GPF+N+ +H  DP HNT+  T+SG
Sbjct:  131 YVEIRRWQDIKNPGSVNQDPIFKSYSLPPHECGYPGRVFNPLNFAP-LENKEKELANGRLAMLAFLGFLVQHNVHGKGPFENLQQHLADPWHNTIIQTISG 230          
BLAST of FE670674 vs. TrEMBL
Match: B9RLX2_RICCO (Chlorophyll A/B binding protein, putative OS=Ricinus communis GN=RCOM_1471590 PE=4 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 1.651e-27
Identity = 63/108 (58.33%), Postives = 74/108 (68.52%), Query Frame = -1
Query:   62 EFFLFPYVEIRGWRDT*NTRSVYPDLIF*RYSVRPNEVGYPGGAFYPLNFAPTLEGIERGHAPGRXXXXXXLGFIVLHNMTRAGPFDNILRHTFDPRHNTLFLTLSGD 385
            EF LF YVEIR W+D  N  SV  D IF +YS+ PNEVGYPGG F PLNFAPTLE  E+  A GR      LGF++ HN+T  GPFDN+L+H  DP HNT+  T SG+
Sbjct:  144 EFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTLEAKEKELANGRLAMLAFLGFVIQHNVTGKGPFDNLLQHLSDPWHNTIIQTFSGN 251          
BLAST of FE670674 vs. TrEMBL
Match: B5KU60_HELAN (Chloroplast chlorophyll a/b binding protein (Fragment) OS=Helianthus annuus GN=cab PE=4 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 3.679e-27
Identity = 64/108 (59.26%), Postives = 73/108 (67.59%), Query Frame = -1
Query:   62 EFFLFPYVEIRGWRDT*NTRSVYPDLIF*RYSVRPNEVGYPGGAFYPLNFAPTLEGIERGHAPGRXXXXXXLGFIVLHNMTRAGPFDNILRHTFDPRHNTLFLTLSGD 385
            EF LF YVEIR W+D  N  SV  D IF  YS+ PNEVGYPGG F PLNFAPT E  E+  A GR      LGFIV HN+T  GPFDN+L+H  DP HNT+  T+SG+
Sbjct:   28 EFILFHYVEIRRWQDIKNPGSVNQDPIFKNYSLPPNEVGYPGGIFNPLNFAPTAEAKEKELANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHLSDPWHNTIVQTMSGN 135          
BLAST of FE670674 vs. TrEMBL
Match: Q7XAC6_BETVU (Chlorophyll a /b binding protein OS=Beta vulgaris GN=cab11 PE=2 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.070e-26
Identity = 63/108 (58.33%), Postives = 72/108 (66.67%), Query Frame = -1
Query:   62 EFFLFPYVEIRGWRDT*NTRSVYPDLIF*RYSVRPNEVGYPGGAFYPLNFAPTLEGIERGHAPGRXXXXXXLGFIVLHNMTRAGPFDNILRHTFDPRHNTLFLTLSGD 385
            EF LF YVEIR W+D  N  SV  D IF +YS+ PNEVGYPGG F PLNFAPT E  E+  A GR      LGFIV HN+T  GPFDN+L+H  DP HNT+  T  G+
Sbjct:  145 EFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTAEAKEKELANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHLSDPWHNTIIQTFGGN 252          
BLAST of FE670674 vs. TrEMBL
Match: Q7M1K8_SOLLC (Chlorophyll a/b-binding protein (cab-12) OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.070e-26
Identity = 64/106 (60.38%), Postives = 71/106 (66.98%), Query Frame = -1
Query:   68 EFFLFPYVEIRGWRDT*NTRSVYPDLIF*RYSVRPNEVGYPGGAFYPLNFAPTLEGIERGHAPGRXXXXXXLGFIVLHNMTRAGPFDNILRHTFDPRHNTLFLTLS 385
            EF LF YVEIR W+D  N  SV  D IF  YS+ PNEVGYPGG F PLNFAPTLE  E+  A GR      LGFIV HN+T  GPFDN+L+H  DP HNT+  T S
Sbjct:  144 EFILFHYVEIRRWQDIKNPGSVNQDPIFKSYSLPPNEVGYPGGIFNPLNFAPTLEAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIIQTFS 249          
BLAST of FE670674 vs. TrEMBL
Match: D7SIA0_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_0.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00007988001 PE=4 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 1.398e-26
Identity = 64/107 (59.81%), Postives = 71/107 (66.36%), Query Frame = -1
Query:   65 EFFLFPYVEIRGWRDT*NTRSVYPDLIF*RYSVRPNEVGYPGGAFYPLNFAPTLEGIERGHAPGRXXXXXXLGFIVLHNMTRAGPFDNILRHTFDPRHNTLFLTLSG 385
            EF LF YVEIR W+D  N  SV  D IF  YS+ PNEVGYPGG F PLNFAPT E  E+  A GR      LGFIV HN+T  GPFDN+L+H  DP HNT+  TL G
Sbjct:  142 EFILFHYVEIRRWQDIKNPGSVNQDPIFKNYSLPPNEVGYPGGIFNPLNFAPTEEAKEKELANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIIQTLRG 248          
BLAST of FE670674 vs. TrEMBL
Match: A5AEI0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_038035 PE=4 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 1.398e-26
Identity = 64/107 (59.81%), Postives = 71/107 (66.36%), Query Frame = -1
Query:   65 EFFLFPYVEIRGWRDT*NTRSVYPDLIF*RYSVRPNEVGYPGGAFYPLNFAPTLEGIERGHAPGRXXXXXXLGFIVLHNMTRAGPFDNILRHTFDPRHNTLFLTLSG 385
            EF LF YVEIR W+D  N  SV  D IF  YS+ PNEVGYPGG F PLNFAPT E  E+  A GR      LGFIV HN+T  GPFDN+L+H  DP HNT+  TL G
Sbjct:  145 EFILFHYVEIRRWQDIKNPGSVNQDPIFKNYSLPPNEVGYPGGIFNPLNFAPTEEAKEKELANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIIQTLRG 251          
BLAST of FE670674 vs. TrEMBL
Match: Q1H8L9_SOLTU (Chlorophyll a/b binding protein OS=Solanum tuberosum GN=cab1 PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 3.115e-26
Identity = 63/106 (59.43%), Postives = 71/106 (66.98%), Query Frame = -1
Query:   68 EFFLFPYVEIRGWRDT*NTRSVYPDLIF*RYSVRPNEVGYPGGAFYPLNFAPTLEGIERGHAPGRXXXXXXLGFIVLHNMTRAGPFDNILRHTFDPRHNTLFLTLS 385
            EF LF YVEIR W+D  N  SV  D IF  YS+ PN+ GYPGG F PLNFAPT E  E+  A GR      LGFIV HN+T  GPFDN+L+H FDP HNT+  TLS
Sbjct:  145 EFILFHYVEIRRWQDIKNPGSVNQDPIFKSYSLPPNKCGYPGGIFNPLNFAPTEEAKEKELANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHLFDPWHNTIIQTLS 250          
BLAST of FE670674 vs. TrEMBL
Match: B7FJY9_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 3.115e-26
Identity = 63/107 (58.88%), Postives = 72/107 (67.29%), Query Frame = -1
Query:   65 EFFLFPYVEIRGWRDT*NTRSVYPDLIF*RYSVRPNEVGYPGGAFYPLNFAPTLEGIERGHAPGRXXXXXXLGFIVLHNMTRAGPFDNILRHTFDPRHNTLFLTLSG 385
            EF LF YVEIR W+D  N  SV  D IF +YS+   EVGYPGG F PLNFAPTLE  E+  A GR      LGFI+ HN+T  GPFDN+L+H  DP HNT+  TLSG
Sbjct:  145 EFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPKGEVGYPGGIFNPLNFAPTLEAKEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNLLQHLSDPWHNTIVQTLSG 251          
BLAST of FE670674 vs. TrEMBL
Match: A9PIX4_9ROSI (Putative uncharacterized protein OS=Populus trichocarpa x Populus deltoides PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 5.313e-26
Identity = 60/108 (55.56%), Postives = 72/108 (66.67%), Query Frame = -1
Query:   62 EFFLFPYVEIRGWRDT*NTRSVYPDLIF*RYSVRPNEVGYPGGAFYPLNFAPTLEGIERGHAPGRXXXXXXLGFIVLHNMTRAGPFDNILRHTFDPRHNTLFLTLSGD 385
            EF LF YVEIR W+D  N   V  D IF +YS+ PNE GYPGG F PLNFAPT+E  E+  A GR      LGF++ HN+T  GPFDN+L+H  DP HNT+  T SG+
Sbjct:  144 EFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTIEAKEKELANGRLAMLAFLGFVIQHNVTGKGPFDNLLQHISDPWHNTIVQTFSGN 251          
BLAST of FE670674 vs. TrEMBL
Match: B9N4C4_POPTR (Light-harvesting complex I protein Lhca4 OS=Populus trichocarpa GN=Lhca4 PE=4 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 1.546e-25
Identity = 59/108 (54.63%), Postives = 72/108 (66.67%), Query Frame = -1
Query:   62 EFFLFPYVEIRGWRDT*NTRSVYPDLIF*RYSVRPNEVGYPGGAFYPLNFAPTLEGIERGHAPGRXXXXXXLGFIVLHNMTRAGPFDNILRHTFDPRHNTLFLTLSGD 385
            EF LF YVEIR W+D  N   V  D IF +YS+ PNE GYPGG F PLNFAPT+E  E+  A GR      LGF++ HN+T  GPF+N+L+H  DP HNT+  T SG+
Sbjct:  144 EFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTIEAKEKELANGRLAMLAFLGFVIQHNVTGKGPFENLLQHISDPWHNTIVQTFSGN 251          
BLAST of FE670674 vs. TAIR peptide
Match: AT3G47470.1 (| Symbols: LHCA4, CAB4 | light-harvesting chlorophyll-protein complex I subunit A4 | chr3:17493622-17494773 REVERSE LENGTH=251)

HSP 1 Score: 112.464 bits (280), Expect = 7.054e-26
Identity = 58/106 (54.72%), Postives = 69/106 (65.09%), Query Frame = -1
Query:   68 EFFLFPYVEIRGWRDT*NTRSVYPDLIF*RYSVRPNEVGYPGGAFYPLNFAPTLEGIERGHAPGRXXXXXXLGFIVLHNMTRAGPFDNILRHTFDPRHNTLFLTLS 385
            EF LF YVEIR W+D  N  SV  D IF +YS+   EVGYPGG F PLNFAPT E  E+  A GR      LGF+V HN+T  GPF+N+L+H  DP HNT+  T +
Sbjct:  146 EFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPKGEVGYPGGIFNPLNFAPTQEAKEKELANGRLAMLAFLGFVVQHNVTGKGPFENLLQHLSDPWHNTIVQTFN 251          
BLAST of FE670674 vs. TAIR peptide
Match: AT3G61470.1 (| Symbols: LHCA2 | photosystem I light harvesting complex gene 2 | chr3:22745736-22747032 FORWARD LENGTH=257)

HSP 1 Score: 49.2914 bits (116), Expect = 7.334e-7
Identity = 35/108 (32.41%), Postives = 46/108 (42.59%), Query Frame = -1
Query:   80 EFFLFPYVEIRGWRDT*NTRSVYPDLIF*RYSVRPNEVGYPGGAFY-PLNF-----APTLEGIERGHAPGRXXXXXXLGFIVLHNMTRAGPFDNILRHTFDPRHNTLF 385
            E  L  + E R W D     SV  D +F    +   +VGYPGG ++ PL +     A   E   +    GR      +G    H  T  GP DN+  H  DP H T+F
Sbjct:  144 ELILIGWAEGRRWADIIKPGSVNTDPVFPNNKLTGTDVGYPGGLWFDPLGWGSGSPAKLKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATIF 251          
The following BLAST results are available for this feature:
BLAST of FE670674 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 3
Match NameE-valueIdentityDescription
CB24_PEA2.879e-2656.48Chlorophyll a-b binding protein P4, chloroplastic ... [more]
CA4_ARATH7.092e-2554.72Chlorophyll a-b binding protein 4, chloroplastic O... [more]
CB120_HORVU1.384e-2052.48Chlorophyll a-b binding protein 1B-20, chloroplast... [more]
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BLAST of FE670674 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
B9RLX2_RICCO1.651e-2758.33Chlorophyll A/B binding protein, putative OS=Ricin... [more]
B5KU60_HELAN3.679e-2759.26Chloroplast chlorophyll a/b binding protein (Fragm... [more]
Q7XAC6_BETVU1.070e-2658.33Chlorophyll a /b binding protein OS=Beta vulgaris ... [more]
Q7M1K8_SOLLC1.070e-2660.38Chlorophyll a/b-binding protein (cab-12) OS=Solanu... [more]
D7SIA0_VITVI1.398e-2659.81Whole genome shotgun sequence of line PN40024, sca... [more]
A5AEI0_VITVI1.398e-2659.81Putative uncharacterized protein OS=Vitis vinifera... [more]
Q1H8L9_SOLTU3.115e-2659.43Chlorophyll a/b binding protein OS=Solanum tuberos... [more]
B7FJY9_MEDTR3.115e-2658.88Putative uncharacterized protein OS=Medicago trunc... [more]
A9PIX4_9ROSI5.313e-2655.56Putative uncharacterized protein OS=Populus tricho... [more]
B9N4C4_POPTR1.546e-2554.63Light-harvesting complex I protein Lhca4 OS=Populu... [more]
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BLAST of FE670674 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 2
Match NameE-valueIdentityDescription
AT3G47470.17.054e-2654.72| Symbols: LHCA4, CAB4 | light-harvesting chloroph... [more]
AT3G61470.17.334e-732.41| Symbols: LHCA2 | photosystem I light harvesting ... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 55..64
score
NoneNo IPR availableGENE3D1.10.3460.10no descriptioncoord: 8..73
score: 4.2
NoneNo IPR availableSEGsegsegcoord: 37..43
score
NoneNo IPR availableSUPERFAMILY103511Chlorophyll a-b binding proteincoord: 8..82
score: 3
IPR001344Chlorophyll A-B binding protein, plantPANTHERPTHR21649CHLOROPHYLL A/B BINDING PROTEINcoord: 6..76
score: 1.4

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>FE670674 ID=FE670674; Name=FE670674; organism=Cicer arietinum; type=EST; length=385bp
TGTCTTTCATACAATAAAAAATGCGCTTTCATGTCATAAAGAGAATACAA
CAATGTTTATAGTCGCCACTCAGTGTAAGAAAAAGGGTGTTGTGCCGGGG
ATCAAAAGTGTGCCGCAAGATGTTATCAAAGGGTCCTGCGCGTGTCATGT
TGTGCAGAACTATAAATCCCAAAAGCGCCAACAGCGCCAATCTCCCAGGG
GCATGTCCCCTCTCTATCCCCTCCAAAGTGGGTGCAAAGTTCAGGGGGTA
AAAAGCGCCACCGGGGTATCCAACCTCATTTGGACGCACGCTGTAGCGCT
AGAAAATAAGATCGGGGTAAACACTACGAGTGTTCTAAGTGTCGCGCCAT
CCTCTTATCTCAACATAGGGGAACAGAAAGAACTC
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR001344Chloro_AB-bd_pln