FE672405

EST Overview
NameFE672405
Unique NameFE672405
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length603
Libraries
Library NameType
LIBEST_022820 Drought-stressed chickpea leave librarycdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Homology
BLAST of FE672405 vs. SwissProt
Match: CLPC_PEA (ATP-dependent Clp protease ATP-binding subunit clpC homolog, chloroplastic OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 2.431e-10
Identity = 37/55 (67.27%), Postives = 38/55 (69.09%), Query Frame = -2
Query:  438 RAIMRLLEDSMAEKMLAREIKEXXXXXXXXXXXXXXXVLNGSSGNPESLPEALPV 602
            RAIMRLLEDSMAEKMLAREIKE               VLNGSSG PESLPEAL +
Sbjct:  868 RAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGKVIVLNGSSGTPESLPEALSI 922          
BLAST of FE672405 vs. SwissProt
Match: CLPAB_SOLLC (ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4B, chloroplastic OS=Solanum lycopersicum GN=CD4B PE=3 SV=1)

HSP 1 Score: 54.6842 bits (130), Expect = 4.292e-7
Identity = 33/56 (58.93%), Postives = 35/56 (62.50%), Query Frame = -2
Query:  438 RAIMRLLEDSMAEKMLAREIKEXXXXXXXXXXXXXXXVLNGSSGNP-ESLPEALPV 602
            RAIMRLLEDSMAEKMLA EIKE               VLNGSSG P +  PE +PV
Sbjct:  868 RAIMRLLEDSMAEKMLANEIKEGDSVIVDVDSDGNVTVLNGSSGTPSDPAPEPIPV 923          
BLAST of FE672405 vs. TrEMBL
Match: A5BB92_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_010724 PE=3 SV=1)

HSP 1 Score: 62.7734 bits (151), Expect = 2.204e-8
Identity = 38/56 (67.86%), Postives = 39/56 (69.64%), Query Frame = -2
Query:  438 RAIMRLLEDSMAEKMLAREIKEXXXXXXXXXXXXXXXVLNGSSG-NPESLPEALPV 602
            RAIMRLLEDSMAEKMLAREIKE               VLNGSSG  PESLPEA+PV
Sbjct:  835 RAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNGSSGAPPESLPEAMPV 890          
BLAST of FE672405 vs. TrEMBL
Match: B9RA77_RICCO (ATP-dependent clp protease, putative OS=Ricinus communis GN=RCOM_1504150 PE=3 SV=1)

HSP 1 Score: 59.6918 bits (143), Expect = 1.866e-7
Identity = 34/55 (61.82%), Postives = 37/55 (67.27%), Query Frame = -2
Query:  438 RAIMRLLEDSMAEKMLAREIKEXXXXXXXXXXXXXXXVLNGSSGNPESLPEALPV 602
            RAIMRLLEDSMAEKMLA EIKE               VLNGSSG+PE+LP+ L V
Sbjct:  869 RAIMRLLEDSMAEKMLAGEIKEGDSVIVDVDSDGNVIVLNGSSGSPEALPDVLSV 923          
BLAST of FE672405 vs. TAIR peptide
Match: AT5G50920.1 (| Symbols: CLPC, ATHSP93-V, HSP93-V, DCA1, CLPC1 | CLPC homologue 1 | chr5:20715710-20719800 REVERSE LENGTH=929)

HSP 1 Score: 52.373 bits (124), Expect = 2.225e-7
Identity = 33/59 (55.93%), Postives = 35/59 (59.32%), Query Frame = -2
Query:  438 RAIMRLLEDSMAEKMLAREIKEXXXXXXXXXXXXXXXVLNGSSGNP----ESLPEALPV 602
            RAIMRLLEDSMAEKMLAREIKE               VLNG SG P    E   ++LPV
Sbjct:  870 RAIMRLLEDSMAEKMLAREIKEGDSVIVDVDAEGNVTVLNGGSGTPTTSLEEQEDSLPV 928          
The following BLAST results are available for this feature:
BLAST of FE672405 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 2
Match NameE-valueIdentityDescription
CLPC_PEA2.431e-1067.27ATP-dependent Clp protease ATP-binding subunit clp... [more]
CLPAB_SOLLC4.292e-758.93ATP-dependent Clp protease ATP-binding subunit clp... [more]
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BLAST of FE672405 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 2
Match NameE-valueIdentityDescription
A5BB92_VITVI2.204e-867.86Putative uncharacterized protein OS=Vitis vinifera... [more]
B9RA77_RICCO1.866e-761.82ATP-dependent clp protease, putative OS=Ricinus co... [more]
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BLAST of FE672405 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT5G50920.12.225e-755.93| Symbols: CLPC, ATHSP93-V, HSP93-V, DCA1, CLPC1 |... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 21..41
score
NoneNo IPR availableGENE3D1.10.8.60no descriptioncoord: 1..38
score: 7.5
NoneNo IPR availableSEGsegsegcoord: 23..38
score
IPR019489Clp ATPase, C-terminalPFAMPF10431ClpB_D2-smallcoord: 1..32
score: 1.8

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>FE672405 ID=FE672405; Name=FE672405; organism=Cicer arietinum; type=EST; length=603bp
GGAGTACACATATTTCATACATATCTAACTGTCCAGAATTTGTCGTTGTT
GTACAAGTATGTGATTACATGTCGAGCAATAAATATGCAATAGTAGTACA
GTACTATACAGCAAAGCTGGGATGTTACATTATAACAGTTCAGTGAAAAC
ATGAAAAGACTCTGGCTTCCAATGAAATAGCTGGTGGATGCACATGGCCA
AGGCATGCCATACACGGCTCTTTTTCATCATTCCCACACCCTTTTTAGTT
TTCCCCTATACCCCCTGTTCCTGCAATGTTAACCCCTCAAATTGATTTTG
CTAGGCTTCTAAGGGAAAACATAACTGCGCCTATCAGTAATAAATTAAGA
GATTTAGGTTTATTGACAAGTAAAACATACTATGACTATGCTTTAAATAA
TTCAAGTACATACTTCATAGAAAAGGTAACTACTTTATACAGGAAGAGCC
TCTGGTAATGACTCCGGGTTTCCGCTGCTACCATTGAGAACAATCACATT
CCCGTCAGAATCAACATCTACTATAACAGAGTCACCCTCTTTGATCTCTC
TAGCAAGCATCTTTTCAGCCATGCTATCCTCCAAAAGCCGCATAATAGCT
CTT
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: INTERPRO
TermDefinition
IPR019489Clp_ATPase_C