GR390958

EST Overview
NameGR390958
Unique NameGR390958
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length430
Libraries
Library NameType
LIBEST_024777 ICC1882 dehydration stressed root cDNA librarycdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Homology
BLAST of GR390958 vs. SwissProt
Match: EXLB1_ARATH (Expansin-like B1 OS=Arabidopsis thaliana GN=EXLB1 PE=2 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 3.907e-13
Identity = 34/67 (50.75%), Postives = 43/67 (64.18%), Query Frame = -1
Query:  230 VQLXQEDXQEWXTMRRXFGXVFDAEXPPXGEIKLXFQVSGSAGLXWVESKNVXFSDXQAGAVYDSEI 430
            V++ QED +EW  MRR FG V D + PP G + L F V GSAG+ W++S N   +D  AGA YDS I
Sbjct:  181 VEVWQEDCKEWRRMRRVFGAVHDLQNPPRGTLTLRFLVYGSAGINWIQSPNAIPADWTAGATYDSNI 247          
BLAST of GR390958 vs. TrEMBL
Match: C6TNL8_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 2.913e-16
Identity = 41/68 (60.29%), Postives = 48/68 (70.59%), Query Frame = -1
Query:  227 VQLXQEDXQEWXTMRRXFGXVFDAEXPPXGEIKLXFQVSGSAGLXWVESKNVXFSDXQAGAVYDSEIQ 430
            V+L Q+D QEW  MRR FG +FD   PP GEI L FQVSGSAGL WV+SKN    D +AGA YD+ +Q
Sbjct:   71 VELFQQDCQEWKPMRRAFGAMFDYSNPPNGEIYLRFQVSGSAGLYWVQSKNAISGDWKAGATYDTNVQ 138          
BLAST of GR390958 vs. TrEMBL
Match: B9SZ01_RICCO (Major pollen allergen Ory s 1, putative OS=Ricinus communis GN=RCOM_0120910 PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.309e-13
Identity = 37/68 (54.41%), Postives = 46/68 (67.65%), Query Frame = -1
Query:  227 VQLXQEDXQEWXTMRRXFGXVFDAEXPPXGEIKLXFQVSGSAGLXWVESKNVXFSDXQAGAVYDSEIQ 430
            VQ+ QED +EW  MR+ +G V+D   PP G I L FQVSGSAGL WV++KN   S+ + G  YDS IQ
Sbjct:  178 VQIWQEDCKEWIGMRKAYGAVWDMPNPPKGYITLRFQVSGSAGLTWVQAKNAIPSEWKVGVAYDSAIQ 245          
BLAST of GR390958 vs. TrEMBL
Match: B9MUV0_POPTR (Putative uncharacterized protein PtrEXLB2 OS=Populus trichocarpa GN=PtrEXLB2 PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 6.717e-13
Identity = 37/68 (54.41%), Postives = 45/68 (66.18%), Query Frame = -1
Query:  227 VQLXQEDXQEWXTMRRXFGXVFDAEXPPXGEIKLXFQVSGSAGLXWVESKNVXFSDXQAGAVYDSEIQ 430
            V+L QED +EW  MRR +G V+D   PP G I L  QV GSAG+ WV++ NV  SD +AG  YDS IQ
Sbjct:  182 VELRQEDCKEWRGMRRAYGAVWDIPNPPKGAISLKLQVCGSAGVTWVQADNVLPSDWKAGVAYDSAIQ 249          
BLAST of GR390958 vs. TrEMBL
Match: B9N2W2_POPTR (Putative uncharacterized protein PtrEXLB1 OS=Populus trichocarpa GN=PtrEXLB1 PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 4.354e-12
Identity = 37/69 (53.62%), Postives = 46/69 (66.67%), Query Frame = -1
Query:  227 VQLXQEDXQEWXTMRRXFGXVFDAEXPPXGEIKLXFQVSGSAGL-XWVESKNVXFSDXQAGAVYDSEIQ 430
            V+L QED +EW  MRR +G V+D   PP G I L FQVSGSAG+  W ++ NV  SD +AG  YDS +Q
Sbjct:  166 VELWQEDCKEWRGMRRAYGAVWDMPNPPKGAISLRFQVSGSAGVTYWAQAANVIPSDWKAGIAYDSTVQ 234          
BLAST of GR390958 vs. TrEMBL
Match: Q0WRS3_ARATH (Expansin-like protein OS=Arabidopsis thaliana GN=At4g17030 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 7.426e-12
Identity = 34/67 (50.75%), Postives = 43/67 (64.18%), Query Frame = -1
Query:  230 VQLXQEDXQEWXTMRRXFGXVFDAEXPPXGEIKLXFQVSGSAGLXWVESKNVXFSDXQAGAVYDSEI 430
            V++ QED +EW  MRR FG V D + PP G + L F V GSAG+ W++S N   +D  AGA YDS I
Sbjct:  181 VEVWQEDCKEWRRMRRVFGAVHDLQNPPRGTLTLRFLVYGSAGINWIQSPNAIPADWTAGATYDSNI 247          
BLAST of GR390958 vs. TrEMBL
Match: D7MC35_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_915018 PE=4 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 7.426e-12
Identity = 34/67 (50.75%), Postives = 43/67 (64.18%), Query Frame = -1
Query:  230 VQLXQEDXQEWXTMRRXFGXVFDAEXPPXGEIKLXFQVSGSAGLXWVESKNVXFSDXQAGAVYDSEI 430
            V++ QED +EW  MRR FG V D + PP G + L F V GSAG+ W++S N   +D  AGA YDS I
Sbjct:  181 VEVWQEDCKEWRRMRRVFGAVHDLQNPPRGTLTLRFLVYGSAGINWIQSPNAIPADWTAGATYDSNI 247          
BLAST of GR390958 vs. TrEMBL
Match: D7U6Z9_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_1455.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00004595001 PE=4 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 2.822e-11
Identity = 34/68 (50.00%), Postives = 41/68 (60.29%), Query Frame = -1
Query:  227 VQLXQEDXQEWXTMRRXFGXVFDAEXPPXGEIKLXFQVSGSAGLXWVESKNVXFSDXQAGAVYDSEIQ 430
            V + QED QEW  MR+ +G V+D   PP G + L FQVSG  G  WV+  NV  SD +AG  YDS  Q
Sbjct:  181 VDIWQEDCQEWKGMRKSYGAVWDMANPPKGPVGLRFQVSGRGGQKWVQLMNVIPSDWKAGVAYDSAFQ 248          
BLAST of GR390958 vs. TrEMBL
Match: B9SZ02_RICCO (Major pollen allergen Ory s 1, putative OS=Ricinus communis GN=RCOM_0120920 PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 4.814e-11
Identity = 32/67 (47.76%), Postives = 44/67 (65.67%), Query Frame = -1
Query:  230 VQLXQEDXQEWXTMRRXFGXVFDAEXPPXGEIKLXFQVSGSAGLXWVESKNVXFSDXQAGAVYDSEI 430
            VQ+ QED +EW  MR+ +G V+D   PP G I L FQVSGSAGL WV++KN    + + G  Y+ ++
Sbjct:  181 VQIWQEDCKEWIGMRKAYGAVWDMPNPPKGYITLRFQVSGSAGLTWVQAKNAIPREWKVGVAYNIQL 247          
BLAST of GR390958 vs. TrEMBL
Match: D7TG84_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_309.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00005915001 PE=4 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 2.389e-10
Identity = 33/68 (48.53%), Postives = 39/68 (57.35%), Query Frame = -1
Query:  227 VQLXQEDXQEWXTMRRXFGXVFDAEXPPXGEIKLXFQVSGSAGLXWVESKNVXFSDXQAGAVYDSEIQ 430
            V + QED Q W  MR+  G V+D   PP G + L FQVSG  G  WV+  NV  SD +AG  YDS  Q
Sbjct:  181 VDIWQEDSQAWKGMRKSHGAVWDMPNPPKGPVSLRFQVSGRRGQKWVQLMNVIPSDWKAGVAYDSNFQ 248          
BLAST of GR390958 vs. TrEMBL
Match: D7TG86_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_309.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00005917001 PE=4 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 4.075e-10
Identity = 32/68 (47.06%), Postives = 40/68 (58.82%), Query Frame = -1
Query:  227 VQLXQEDXQEWXTMRRXFGXVFDAEXPPXGEIKLXFQVSGSAGLXWVESKNVXFSDXQAGAVYDSEIQ 430
            V + QED Q W  MR+ +G V+D   PP G + L FQVSG  G  WV+  NV  S  +AG  YDS+ Q
Sbjct:  181 VDIWQEDSQAWKGMRKSYGAVWDMANPPKGPVSLRFQVSGRRGQKWVQLMNVIPSHWKAGVAYDSKFQ 248          
BLAST of GR390958 vs. TAIR peptide
Match: AT4G17030.1 (| Symbols: ATEXLB1, EXPR, AT-EXPR, ATEXPR1, ATHEXP BETA 3.1, EXLB1 | expansin-like B1 | chr4:9581817-9583181 REVERSE LENGTH=250)

HSP 1 Score: 73.559 bits (179), Expect = 4.782e-14
Identity = 34/67 (50.75%), Postives = 43/67 (64.18%), Query Frame = -1
Query:  230 VQLXQEDXQEWXTMRRXFGXVFDAEXPPXGEIKLXFQVSGSAGLXWVESKNVXFSDXQAGAVYDSEI 430
            V++ QED +EW  MRR FG V D + PP G + L F V GSAG+ W++S N   +D  AGA YDS I
Sbjct:  181 VEVWQEDCKEWRRMRRVFGAVHDLQNPPRGTLTLRFLVYGSAGINWIQSPNAIPADWTAGATYDSNI 247          
The following BLAST results are available for this feature:
BLAST of GR390958 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 1
Match NameE-valueIdentityDescription
EXLB1_ARATH3.907e-1350.75Expansin-like B1 OS=Arabidopsis thaliana GN=EXLB1 ... [more]
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BLAST of GR390958 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
C6TNL8_SOYBN2.913e-1660.29Putative uncharacterized protein OS=Glycine max PE... [more]
B9SZ01_RICCO2.309e-1354.41Major pollen allergen Ory s 1, putative OS=Ricinus... [more]
B9MUV0_POPTR6.717e-1354.41Putative uncharacterized protein PtrEXLB2 OS=Popul... [more]
B9N2W2_POPTR4.354e-1253.62Putative uncharacterized protein PtrEXLB1 OS=Popul... [more]
Q0WRS3_ARATH7.426e-1250.75Expansin-like protein OS=Arabidopsis thaliana GN=A... [more]
D7MC35_ARALY7.426e-1250.75Putative uncharacterized protein OS=Arabidopsis ly... [more]
D7U6Z9_VITVI2.822e-1150.00Whole genome shotgun sequence of line PN40024, sca... [more]
B9SZ02_RICCO4.814e-1147.76Major pollen allergen Ory s 1, putative OS=Ricinus... [more]
D7TG84_VITVI2.389e-1048.53Whole genome shotgun sequence of line PN40024, sca... [more]
D7TG86_VITVI4.075e-1047.06Whole genome shotgun sequence of line PN40024, sca... [more]
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BLAST of GR390958 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT4G17030.14.782e-1450.75| Symbols: ATEXLB1, EXPR, AT-EXPR, ATEXPR1, ATHEXP... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 32..43
score
IPR007117Pollen allergen/expansin, C-terminalGENE3D2.60.40.760no descriptioncoord: 1..66
score: 9.2
IPR007117Pollen allergen/expansin, C-terminalPROFILEPS50843EXPANSIN_CBDcoord: 1..65
score: 9

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GR390958 ID=GR390958; Name=GR390958; organism=Cicer arietinum; type=EST; length=430bp
TTTTTTTTGCGAAAAGGNACCNTTTATTTATTGATTTATGTATATAGTTT
GGGANGAGTCATATGAAAAGCACATAAATCCCACAGTTTTAGTTAANTAC
AAANAGCACTCACTCACTCCACCCACCCACTANTAAANAGGAACATTAAT
TTTANAATGCCNCAACACAAACAAGTAACAATAAAGTACTAGTAATCTAT
AAGTGCTTTTTGNATTTTTAANCAAACTGAATTTCTGAATCATAAACAGC
CCCAGCCTGNCAATCACTAAANATAACATTCTTGGACTCTACCCAANANA
GTCCAGCACTACCACTCACTTGGAACCNCAACTTGATTTCNCCNCTTGGA
GGGNTCTCTGCATCAAANACTGNTCCAAANGNCCTACGCATTGTCCNCCA
CTCTTGGNAATCTTCCTGCCNCAATTGAAC
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: INTERPRO
TermDefinition
IPR007117Expansin_CBD