GR395179

EST Overview
NameGR395179
Unique NameGR395179
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length412
Libraries
Library NameType
LIBEST_024780 ICC1882 PEG induced drought cDNA librarycdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Homology
BLAST of GR395179 vs. TrEMBL
Match: B9RYU1_RICCO (Cystathionine gamma-synthase, putative OS=Ricinus communis GN=RCOM_1313240 PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 1.954e-12
Identity = 37/66 (56.06%), Postives = 43/66 (65.15%), Query Frame = 3
Query:    6 GFMAVSLGYYEXXXXXXXXXXXXXXXXXXQKLAGITPGLIRLSIGYIGTLEQKWGQLEKALIKFNE 203
            GFMAVSLGYYE                  +KLAGI+PGLIR+S+GY+GTLEQKW Q EKAL +  E
Sbjct:  382 GFMAVSLGYYETLMSVSGSSTSSELNAEEKKLAGISPGLIRMSVGYLGTLEQKWSQFEKALSRMKE 447          
BLAST of GR395179 vs. TrEMBL
Match: Q9SGU9_ARATH (At1g64660 OS=Arabidopsis thaliana GN=At1g64660/F1N19.23 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.401e-10
Identity = 32/63 (50.79%), Postives = 41/63 (65.08%), Query Frame = 3
Query:    6 GFMAVSLGYYEXXXXXXXXXXXXXXXXXXQKLAGITPGLIRLSIGYIGTLEQKWGQLEKALIK 194
            GFMAVSLGYYE                  ++ AGI+PGL+R+S+GY+GTLEQKW Q EKA ++
Sbjct:  378 GFMAVSLGYYETLMSCSGSSTSSELDPSQKEAAGISPGLVRMSVGYVGTLEQKWTQFEKAFLR 440          
BLAST of GR395179 vs. TrEMBL
Match: D7KEW4_ARALY (Predicted protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_681961 PE=4 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.401e-10
Identity = 32/63 (50.79%), Postives = 41/63 (65.08%), Query Frame = 3
Query:    6 GFMAVSLGYYEXXXXXXXXXXXXXXXXXXQKLAGITPGLIRLSIGYIGTLEQKWGQLEKALIK 194
            GFMAVSLGYYE                  ++ AGI+PGL+R+S+GY+GTLEQKW Q EKA ++
Sbjct:  378 GFMAVSLGYYETLMSCSGSSTSSELDPSQKEAAGISPGLVRMSVGYVGTLEQKWTQFEKAFLR 440          
BLAST of GR395179 vs. TrEMBL
Match: B9GK77_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_709036 PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 3.120e-10
Identity = 32/66 (48.48%), Postives = 40/66 (60.61%), Query Frame = 3
Query:    6 GFMAVSLGYYEXXXXXXXXXXXXXXXXXXQKLAGITPGLIRLSIGYIGTLEQKWGQLEKALIKFNE 203
            GFMAVSLGYYE                  Q LAGI+PGL+R+S+G++GTL QKW Q EKA  +  +
Sbjct:  383 GFMAVSLGYYETLMSCSGSSTSSELNDEEQALAGISPGLVRISVGFVGTLAQKWSQFEKAFSRLQD 448          
BLAST of GR395179 vs. TrEMBL
Match: A9PI56_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 3.120e-10
Identity = 32/66 (48.48%), Postives = 40/66 (60.61%), Query Frame = 3
Query:    6 GFMAVSLGYYEXXXXXXXXXXXXXXXXXXQKLAGITPGLIRLSIGYIGTLEQKWGQLEKALIKFNE 203
            GFMAVSLGYYE                  Q LAGI+PGL+R+S+G++GTL QKW Q EKA  +  +
Sbjct:  200 GFMAVSLGYYETLMSCSGSSTSSELNDEEQALAGISPGLVRISVGFVGTLAQKWSQFEKAFSRLQD 265          
BLAST of GR395179 vs. TrEMBL
Match: A5BR77_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_026969 PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 5.322e-10
Identity = 33/61 (54.10%), Postives = 38/61 (62.30%), Query Frame = 3
Query:    6 GFMAVSLGYYEXXXXXXXXXXXXXXXXXXQKLAGITPGLIRLSIGYIGTLEQKWGQLEKAL 188
            GFMAVSLGYYE                  + LAGI PGL+R+S+GY GTLEQ+W Q EKAL
Sbjct:  335 GFMAVSLGYYETLMSCSGSSTSSEMNAEEKALAGIXPGLVRMSVGYSGTLEQRWSQFEKAL 395          
BLAST of GR395179 vs. TrEMBL
Match: A9P2J0_PICSI (Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 6.951e-10
Identity = 34/66 (51.52%), Postives = 39/66 (59.09%), Query Frame = 3
Query:    6 GFMAVSLGYYEXXXXXXXXXXXXXXXXXXQKLAGITPGLIRLSIGYIGTLEQKWGQLEKALIKFNE 203
            G MAVSLGYYE                  ++LAGI+PGLIR+SIGY GTLEQ+W Q E AL    E
Sbjct:  366 GLMAVSLGYYETLMSCSGSSTSSEMNEEEKELAGISPGLIRMSIGYSGTLEQRWSQFENALTSMTE 431          
BLAST of GR395179 vs. TrEMBL
Match: Q94HY3_ORYSA (Putative gamma-lyase OS=Oryza sativa GN=OSJNBa0076F20.6 PE=3 SV=1)

HSP 1 Score: 62.003 bits (149), Expect = 2.236e-8
Identity = 30/61 (49.18%), Postives = 37/61 (60.66%), Query Frame = 3
Query:    6 GFMAVSLGYYEXXXXXXXXXXXXXXXXXXQKLAGITPGLIRLSIGYIGTLEQKWGQLEKAL 188
            G MAVSLGYYE                  +  AGI+PGL+R+S+GY GTLEQ+W Q E+AL
Sbjct:  382 GLMAVSLGYYETLMSCSGSSTSSEMPPEDRARAGISPGLVRMSVGYNGTLEQRWAQFERAL 442          
BLAST of GR395179 vs. TrEMBL
Match: Q8H9F3_ORYSA (Rrj1 (Fragment) OS=Oryza sativa GN=RRJ1 PE=2 SV=1)

HSP 1 Score: 62.003 bits (149), Expect = 2.236e-8
Identity = 30/61 (49.18%), Postives = 37/61 (60.66%), Query Frame = 3
Query:    6 GFMAVSLGYYEXXXXXXXXXXXXXXXXXXQKLAGITPGLIRLSIGYIGTLEQKWGQLEKAL 188
            G MAVSLGYYE                  +  AGI+PGL+R+S+GY GTLEQ+W Q E+AL
Sbjct:  255 GLMAVSLGYYETLMSCSGSSTSSEMPPEDRARAGISPGLVRMSVGYNGTLEQRWAQFERAL 315          
BLAST of GR395179 vs. TrEMBL
Match: Q7XCS3_ORYSJ (Cys/Met metabolism PLP-dependent enzyme family protein, expressed OS=Oryza sativa subsp. japonica GN=Os10g0517500 PE=2 SV=1)

HSP 1 Score: 62.003 bits (149), Expect = 2.236e-8
Identity = 30/61 (49.18%), Postives = 37/61 (60.66%), Query Frame = 3
Query:    6 GFMAVSLGYYEXXXXXXXXXXXXXXXXXXQKLAGITPGLIRLSIGYIGTLEQKWGQLEKAL 188
            G MAVSLGYYE                  +  AGI+PGL+R+S+GY GTLEQ+W Q E+AL
Sbjct:  382 GLMAVSLGYYETLMSCSGSSTSSEMPPEDRARAGISPGLVRMSVGYNGTLEQRWAQFERAL 442          
BLAST of GR395179 vs. TAIR peptide
Match: AT1G64660.1 (| Symbols: ATMGL, MGL | methionine gamma-lyase | chr1:24028977-24030537 FORWARD LENGTH=441)

HSP 1 Score: 69.3218 bits (168), Expect = 7.827e-13
Identity = 32/63 (50.79%), Postives = 41/63 (65.08%), Query Frame = 3
Query:    6 GFMAVSLGYYEXXXXXXXXXXXXXXXXXXQKLAGITPGLIRLSIGYIGTLEQKWGQLEKALIK 194
            GFMAVSLGYYE                  ++ AGI+PGL+R+S+GY+GTLEQKW Q EKA ++
Sbjct:  378 GFMAVSLGYYETLMSCSGSSTSSELDPSQKEAAGISPGLVRMSVGYVGTLEQKWTQFEKAFLR 440          
The following BLAST results are available for this feature:
BLAST of GR395179 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
B9RYU1_RICCO1.954e-1256.06Cystathionine gamma-synthase, putative OS=Ricinus ... [more]
Q9SGU9_ARATH1.401e-1050.79At1g64660 OS=Arabidopsis thaliana GN=At1g64660/F1N... [more]
D7KEW4_ARALY1.401e-1050.79Predicted protein OS=Arabidopsis lyrata subsp. lyr... [more]
B9GK77_POPTR3.120e-1048.48Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
A9PI56_POPTR3.120e-1048.48Putative uncharacterized protein OS=Populus tricho... [more]
A5BR77_VITVI5.322e-1054.10Putative uncharacterized protein OS=Vitis vinifera... [more]
A9P2J0_PICSI6.951e-1051.52Putative uncharacterized protein OS=Picea sitchens... [more]
Q94HY3_ORYSA2.236e-849.18Putative gamma-lyase OS=Oryza sativa GN=OSJNBa0076... [more]
Q8H9F3_ORYSA2.236e-849.18Rrj1 (Fragment) OS=Oryza sativa GN=RRJ1 PE=2 SV=1[more]
Q7XCS3_ORYSJ2.236e-849.18Cys/Met metabolism PLP-dependent enzyme family pro... [more]
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BLAST of GR395179 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT1G64660.17.827e-1350.79| Symbols: ATMGL, MGL | methionine gamma-lyase | c... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000277Cys/Met metabolism, pyridoxal phosphate-dependent enzymePANTHERPTHR11808TRANS-SULFURATION ENZYME FAMILY MEMBERcoord: 2..65
score: 1.1
IPR000277Cys/Met metabolism, pyridoxal phosphate-dependent enzymePFAMPF01053Cys_Met_Meta_PPcoord: 4..46
score: 6.1
IPR015422Pyridoxal phosphate-dependent transferase, major region, subdomain 2GENE3D3.90.1150.10no descriptioncoord: 4..63
score: 3.4
IPR015424Pyridoxal phosphate-dependent transferase, major domainSUPERFAMILY53383PLP-dependent transferasescoord: 4..62
score: 4
NoneNo IPR availablePANTHERPTHR11808:SF9METHIONINE GAMMA-LYASEcoord: 2..65
score: 1.1
NoneNo IPR availableSEGsegsegcoord: 13..30
score

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GR395179 ID=GR395179; Name=GR395179; organism=Cicer arietinum; type=EST; length=412bp
GCGGGGGTTTCATGGCTGTTAGTTTAGGTTACTATGAGACCCTAATGTCT
TGCTCTGGAAGTAGTACTAGTGGTGAGATGAGTGCGGAGGCACAGAAGCT
TGCTGGAATCACACCGGGACTAATAAGGTTGTCAATCGGGTACATTGGAA
CATTGGAGCAGAAGTGGGGTCAGCTTGAAAAAGCACTTATTAAATTTAAT
GAAAAGCACTAGTGTGTTTTCTTTTCCCCATTTTTTTTTAGTAGATTTAA
GATGAAGAATTTGTACAAATGGGGGTTATGAATAAATTTAAGTTAATTAC
TTTTGTTTTTAAACAATTTATTCGTCCTTAGTAGCCTGTAGCCTAGTAGG
GTAGGGATATCCGTCATTTGTACTATGCCACATGAGTTGGCTTTTTTAAT
ATTACGCANAAN
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: Biological Process
TermDefinition
GO:0006520amino acid metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0030170pyridoxal phosphate binding
GO:0003824catalytic activity
Vocabulary: INTERPRO
TermDefinition
IPR000277Cys/Met-Metab_PyrdxlP-dep_enz
IPR015422PyrdxlP-dep_Trfase_small
IPR015424PyrdxlP-dep_Trfase