GR401063
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GR401063 vs. SwissProt
Match: 4CL2_ARATH (4-coumarate--CoA ligase 2 OS=Arabidopsis thaliana GN=4CL2 PE=1 SV=2) HSP 1 Score: 73.9442 bits (180), Expect = 2.803e-13 Identity = 37/58 (63.79%), Postives = 44/58 (75.86%), Query Frame = -2 Query: 153 VRSNGFRIPEDEIKQYISQQVVFYKRISKVFFAESILKAASGKFLRKELTAKFNQGFM 326 VRS I EDEIKQ++S+QVVFYKRI+KVFF +SI KA SGK LRK+L A+ G M Sbjct: 498 VRSKDSNISEDEIKQFVSKQVVFYKRINKVFFTDSIPKAPSGKILRKDLRARLANGLM 555
BLAST of GR401063 vs. SwissProt
Match: 4CL_VANPL (4-coumarate--CoA ligase OS=Vanilla planifolia GN=4CL PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 3.661e-13 Identity = 35/52 (67.31%), Postives = 44/52 (84.62%), Query Frame = -2 Query: 171 VRSNGFRIPEDEIKQYISQQVVFYKRISKVFFAESILKAASGKFLRKELTAK 326 V+SNG I EDEIKQ+IS+QV+FYKRI++VFF E+I KA SGK LRK+L A+ Sbjct: 493 VKSNGHNITEDEIKQFISKQVIFYKRINRVFFVEAIPKAPSGKILRKDLRAR 544
BLAST of GR401063 vs. SwissProt
Match: 4CL2_PETCR (4-coumarate--CoA ligase 1 OS=Petroselinum crispum GN=4CL2 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 1.391e-12 Identity = 34/56 (60.71%), Postives = 44/56 (78.57%), Query Frame = -2 Query: 159 VRSNGFRIPEDEIKQYISQQVVFYKRISKVFFAESILKAASGKFLRKELTAKFNQG 326 VR+NGF E+EIKQ++S+QVVFYKRI +VFF ++I K+ SGK LRK+L AK G Sbjct: 485 VRTNGFTTTEEEIKQFVSKQVVFYKRIFRVFFVDAIPKSPSGKILRKDLRAKIASG 540
BLAST of GR401063 vs. SwissProt
Match: 4CL2_TOBAC (4-coumarate--CoA ligase 2 OS=Nicotiana tabacum GN=4CL2 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.817e-12 Identity = 34/56 (60.71%), Postives = 43/56 (76.79%), Query Frame = -2 Query: 159 VRSNGFRIPEDEIKQYISQQVVFYKRISKVFFAESILKAASGKFLRKELTAKFNQG 326 VRSNG I EDE+K +IS+QV+FYKRI +VFF ++I K+ SGK LRK+L AK G Sbjct: 484 VRSNGSTITEDEVKDFISKQVIFYKRIKRVFFVDAIPKSPSGKILRKDLRAKLAAG 539
BLAST of GR401063 vs. SwissProt
Match: 4CL2_SOLTU (4-coumarate--CoA ligase 2 OS=Solanum tuberosum GN=4CL2 PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 2.373e-12 Identity = 33/56 (58.93%), Postives = 43/56 (76.79%), Query Frame = -2 Query: 159 VRSNGFRIPEDEIKQYISQQVVFYKRISKVFFAESILKAASGKFLRKELTAKFNQG 326 VRSNG I EDE+K +IS+QV+FYKRI +VFF E++ K+ SGK LRK+L A+ G Sbjct: 487 VRSNGSTITEDEVKDFISKQVIFYKRIKRVFFVETVPKSPSGKILRKDLRARLAAG 542
BLAST of GR401063 vs. SwissProt
Match: 4CL1_SOLTU (4-coumarate--CoA ligase 1 OS=Solanum tuberosum GN=4CL1 PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 2.373e-12 Identity = 33/56 (58.93%), Postives = 43/56 (76.79%), Query Frame = -2 Query: 159 VRSNGFRIPEDEIKQYISQQVVFYKRISKVFFAESILKAASGKFLRKELTAKFNQG 326 VRSNG I EDE+K +IS+QV+FYKRI +VFF E++ K+ SGK LRK+L A+ G Sbjct: 487 VRSNGSTITEDEVKDFISKQVIFYKRIKRVFFVETVPKSPSGKILRKDLRARLAAG 542
BLAST of GR401063 vs. SwissProt
Match: 4CL1_ARATH (4-coumarate--CoA ligase 1 OS=Arabidopsis thaliana GN=4CL1 PE=1 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 2.373e-12 Identity = 34/56 (60.71%), Postives = 43/56 (76.79%), Query Frame = -2 Query: 159 VRSNGFRIPEDEIKQYISQQVVFYKRISKVFFAESILKAASGKFLRKELTAKFNQG 326 V+S + ED++KQ++S+QVVFYKRI+KVFF ESI KA SGK LRK+L AK G Sbjct: 505 VKSKDSELSEDDVKQFVSKQVVFYKRINKVFFTESIPKAPSGKILRKDLRAKLANG 560
BLAST of GR401063 vs. SwissProt
Match: 4CL1_TOBAC (4-coumarate--CoA ligase 1 OS=Nicotiana tabacum GN=4CL1 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 3.100e-12 Identity = 32/56 (57.14%), Postives = 43/56 (76.79%), Query Frame = -2 Query: 159 VRSNGFRIPEDEIKQYISQQVVFYKRISKVFFAESILKAASGKFLRKELTAKFNQG 326 VRSNG I EDE+K +IS+QV+FYKR+ +VFF E++ K+ SGK LRK+L A+ G Sbjct: 489 VRSNGSAITEDEVKDFISKQVIFYKRVKRVFFVETVPKSPSGKILRKDLRARLAAG 544
BLAST of GR401063 vs. SwissProt
Match: 4CL1_PETCR (4-coumarate--CoA ligase 1 OS=Petroselinum crispum GN=4CL1 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 3.100e-12 Identity = 33/56 (58.93%), Postives = 44/56 (78.57%), Query Frame = -2 Query: 159 VRSNGFRIPEDEIKQYISQQVVFYKRISKVFFAESILKAASGKFLRKELTAKFNQG 326 VR+NGF E+EIKQ++S+QVVFYKRI +VFF ++I K+ SGK LRK+L A+ G Sbjct: 485 VRTNGFTTTEEEIKQFVSKQVVFYKRIFRVFFVDAIPKSPSGKILRKDLRARIASG 540
BLAST of GR401063 vs. SwissProt
Match: 4CL4_ORYSJ (Probable 4-coumarate--CoA ligase 4 OS=Oryza sativa subsp. japonica GN=4CL4 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 1.538e-11 Identity = 33/56 (58.93%), Postives = 44/56 (78.57%), Query Frame = -2 Query: 159 VRSNGFRIPEDEIKQYISQQVVFYKRISKVFFAESILKAASGKFLRKELTAKFNQG 326 VR G I E+EIKQ+++++VVFYKR++KVFFA+SI K+ SGK LRK+L AK G Sbjct: 493 VRIEGSAISENEIKQFVAKEVVFYKRLNKVFFADSIPKSPSGKILRKDLRAKLAAG 548
BLAST of GR401063 vs. TrEMBL
Match: Q8S564_SOYBN (4-coumarate:coenzyme A ligase OS=Glycine max GN=4CL1 PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 7.289e-15 Identity = 42/59 (71.19%), Postives = 48/59 (81.36%), Query Frame = -2 Query: 150 VRSNGFRIPEDEIKQYISQQVVFYKRISKVFFAESILKAASGKFLRKELTAKFNQGFMV 326 VRSNG I EDEIK+YISQQVVFYKRI +VFF +SI KA SGK LRK LTA+ N+G +V Sbjct: 486 VRSNGSEIAEDEIKKYISQQVVFYKRICRVFFTDSIPKAPSGKILRKVLTARLNEGLVV 544
BLAST of GR401063 vs. TrEMBL
Match: D7SQ89_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_52.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00029182001 PE=4 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.053e-13 Identity = 39/57 (68.42%), Postives = 46/57 (80.70%), Query Frame = -2 Query: 156 VRSNGFRIPEDEIKQYISQQVVFYKRISKVFFAESILKAASGKFLRKELTAKFNQGF 326 VRSNGF I EDEIK+YI++QVV+YKRI +VFF E+I KA SGK LRK+L AK GF Sbjct: 467 VRSNGFEITEDEIKEYIAKQVVYYKRIKRVFFIETIPKAPSGKILRKDLKAKLAAGF 523
BLAST of GR401063 vs. TrEMBL
Match: O48869_9ROSI (4-coumarate:CoA ligase 1 OS=Populus trichocarpa x Populus deltoides GN=4CL1 PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 3.063e-13 Identity = 39/56 (69.64%), Postives = 46/56 (82.14%), Query Frame = -2 Query: 159 VRSNGFRIPEDEIKQYISQQVVFYKRISKVFFAESILKAASGKFLRKELTAKFNQG 326 VR+NG +I EDEIKQYIS+QVVFYKRIS+VFF E+I KA SGK LRK+L A+ G Sbjct: 486 VRANGSKITEDEIKQYISKQVVFYKRISRVFFTEAIPKAPSGKILRKDLRARLATG 541
BLAST of GR401063 vs. TrEMBL
Match: O48868_9ROSI (4-coumarate:CoA ligase 2 OS=Populus trichocarpa x Populus deltoides GN=4CL2 PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 3.063e-13 Identity = 38/56 (67.86%), Postives = 46/56 (82.14%), Query Frame = -2 Query: 159 VRSNGFRIPEDEIKQYISQQVVFYKRISKVFFAESILKAASGKFLRKELTAKFNQG 326 VRSNG +I EDEIKQYIS+QV+FYKRI +VFF E+I KA SGK LRK+L A+ + G Sbjct: 485 VRSNGSKITEDEIKQYISKQVIFYKRIGRVFFTEAIPKAPSGKILRKDLRARVSAG 540
BLAST of GR401063 vs. TrEMBL
Match: B9N2Y9_POPTR (4-Coumarate:CoA ligase OS=Populus trichocarpa GN=4CL1 PE=4 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 3.063e-13 Identity = 39/56 (69.64%), Postives = 46/56 (82.14%), Query Frame = -2 Query: 159 VRSNGFRIPEDEIKQYISQQVVFYKRISKVFFAESILKAASGKFLRKELTAKFNQG 326 VR+NG +I EDEIKQYIS+QVVFYKRIS+VFF E+I KA SGK LRK+L A+ G Sbjct: 486 VRANGSKITEDEIKQYISKQVVFYKRISRVFFTEAIPKAPSGKILRKDLRARLATG 541
BLAST of GR401063 vs. TrEMBL
Match: Q9LL50_RUBID (4-coumarate:coA ligase 2 OS=Rubus idaeus PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 4.000e-13 Identity = 39/56 (69.64%), Postives = 45/56 (80.36%), Query Frame = -2 Query: 159 VRSNGFRIPEDEIKQYISQQVVFYKRISKVFFAESILKAASGKFLRKELTAKFNQG 326 VRSNG +I ED+IKQYIS+QVVFYKRISKVFF + I KA SGK LRK+L A+ G Sbjct: 486 VRSNGSKISEDDIKQYISKQVVFYKRISKVFFTDKIPKAPSGKILRKDLRARLAAG 541
BLAST of GR401063 vs. TrEMBL
Match: Q0GZS1_9BORA (4-coumarate:CoA ligase OS=Arnebia euchroma PE=2 SV=2) HSP 1 Score: 77.7962 bits (190), Expect = 4.000e-13 Identity = 37/58 (63.79%), Postives = 47/58 (81.03%), Query Frame = -2 Query: 153 VRSNGFRIPEDEIKQYISQQVVFYKRISKVFFAESILKAASGKFLRKELTAKFNQGFM 326 VRSNG I EDEIKQ++S+QV+FYKRI++VFF +SI K+ SGK LRK+L AK GF+ Sbjct: 487 VRSNGSTITEDEIKQFVSKQVIFYKRINRVFFVDSIPKSPSGKILRKDLRAKLAAGFL 544
BLAST of GR401063 vs. TrEMBL
Match: B9IM06_POPTR (4-Coumarate:CoA ligase (Fragment) OS=Populus trichocarpa GN=Ptr4CL1 PE=4 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 6.823e-13 Identity = 38/56 (67.86%), Postives = 45/56 (80.36%), Query Frame = -2 Query: 159 VRSNGFRIPEDEIKQYISQQVVFYKRISKVFFAESILKAASGKFLRKELTAKFNQG 326 VRSNG +I EDEIKQYIS+QV+FYKRI +VFF E+I KA SGK LRK+L A+ G Sbjct: 485 VRSNGSKITEDEIKQYISKQVIFYKRIGRVFFTEAIPKAPSGKILRKDLRARVAAG 540
BLAST of GR401063 vs. TrEMBL
Match: B6RIV5_RUTGR (4-coumarate:CoA ligase 2 OS=Ruta graveolens PE=4 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 6.823e-13 Identity = 37/57 (64.91%), Postives = 47/57 (82.46%), Query Frame = -2 Query: 156 VRSNGFRIPEDEIKQYISQQVVFYKRISKVFFAESILKAASGKFLRKELTAKFNQGF 326 V+SNG +I EDEIKQ++S+QVVFYKRIS+VFF ++I KA SGK LRK+L AK G+ Sbjct: 499 VKSNGSQISEDEIKQFVSKQVVFYKRISRVFFVDAIPKAPSGKILRKDLRAKLAAGY 555
BLAST of GR401063 vs. TrEMBL
Match: B3TJI5_RUTGR (4-coumarate CoA ligase 2 OS=Ruta graveolens PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 6.823e-13 Identity = 37/57 (64.91%), Postives = 47/57 (82.46%), Query Frame = -2 Query: 156 VRSNGFRIPEDEIKQYISQQVVFYKRISKVFFAESILKAASGKFLRKELTAKFNQGF 326 V+SNG +I EDEIKQ++S+QVVFYKRIS+VFF ++I KA SGK LRK+L AK G+ Sbjct: 499 VKSNGSQISEDEIKQFVSKQVVFYKRISRVFFVDAIPKAPSGKILRKDLRAKLAAGY 555
BLAST of GR401063 vs. TAIR peptide
Match: AT3G21240.1 (| Symbols: 4CL2, AT4CL2 | 4-coumarate:CoA ligase 2 | chr3:7454497-7457314 REVERSE LENGTH=556) HSP 1 Score: 73.9442 bits (180), Expect = 2.222e-14 Identity = 37/58 (63.79%), Postives = 44/58 (75.86%), Query Frame = -2 Query: 153 VRSNGFRIPEDEIKQYISQQVVFYKRISKVFFAESILKAASGKFLRKELTAKFNQGFM 326 VRS I EDEIKQ++S+QVVFYKRI+KVFF +SI KA SGK LRK+L A+ G M Sbjct: 498 VRSKDSNISEDEIKQFVSKQVVFYKRINKVFFTDSIPKAPSGKILRKDLRARLANGLM 555
BLAST of GR401063 vs. TAIR peptide
Match: AT1G51680.1 (| Symbols: 4CL1, 4CL.1, AT4CL1 | 4-coumarate:CoA ligase 1 | chr1:19159007-19161464 REVERSE LENGTH=561) HSP 1 Score: 70.8626 bits (172), Expect = 1.881e-13 Identity = 34/56 (60.71%), Postives = 43/56 (76.79%), Query Frame = -2 Query: 159 VRSNGFRIPEDEIKQYISQQVVFYKRISKVFFAESILKAASGKFLRKELTAKFNQG 326 V+S + ED++KQ++S+QVVFYKRI+KVFF ESI KA SGK LRK+L AK G Sbjct: 505 VKSKDSELSEDDVKQFVSKQVVFYKRINKVFFTESIPKAPSGKILRKDLRAKLANG 560
BLAST of GR401063 vs. TAIR peptide
Match: AT1G65060.1 (| Symbols: 4CL3 | 4-coumarate:CoA ligase 3 | chr1:24167385-24171457 REVERSE LENGTH=561) HSP 1 Score: 67.781 bits (164), Expect = 1.592e-12 Identity = 32/52 (61.54%), Postives = 42/52 (80.77%), Query Frame = -2 Query: 171 VRSNGFRIPEDEIKQYISQQVVFYKRISKVFFAESILKAASGKFLRKELTAK 326 VRSNG I E+++K+Y+++QVVFYKR+ KVFF SI K+ SGK LRK+L AK Sbjct: 508 VRSNGNDITEEDVKEYVAKQVVFYKRLHKVFFVASIPKSPSGKILRKDLKAK 559
BLAST of GR401063 vs. TAIR peptide
Match: AT3G21230.1 (| Symbols: 4CL5 | 4-coumarate:CoA ligase 5 | chr3:7448231-7451947 REVERSE LENGTH=570) HSP 1 Score: 62.7734 bits (151), Expect = 5.123e-11 Identity = 30/51 (58.82%), Postives = 38/51 (74.51%), Query Frame = -2 Query: 171 RSNGFRIPEDEIKQYISQQVVFYKRISKVFFAESILKAASGKFLRKELTAK 323 RS G ++ ED++K Y+++QVV YKRI VFF E I KA SGK LRK+L AK Sbjct: 513 RSQGSQLTEDDVKSYVNKQVVHYKRIKMVFFIEVIPKAVSGKILRKDLRAK 563 The following BLAST results are available for this feature:
BLAST of GR401063 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot) Total hits: 10
BLAST of GR401063 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl) Total hits: 10
BLAST of GR401063 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide) Total hits: 4
InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GR401063 ID=GR401063; Name=GR401063; organism=Cicer arietinum; type=EST; length=330bpback to top |