GR401900
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GR401900 vs. TrEMBL
Match: B9I832_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_570914 PE=4 SV=1) HSP 1 Score: 266.929 bits (681), Expect = 8.641e-70 Identity = 129/143 (90.21%), Postives = 139/143 (97.20%), Query Frame = -1 Query: 202 FFGVEDFIDDDNSRPYTYQKGKKSKNPNKHISFKQRTVAYMEPFTLDVFISKRFVSAALTHRVTSKQVAVAGTNSKDIKAVFRSRSDIPACIAIGRILAERAREADVYTAFYTPRDRDKFEGKIRAVVQSLIDNGIDFKVYFD 630 FFGVEDF+DDDNSRPYTYQKGKKSKNPNKH+SFKQRTVAYMEPFTLDVFISKRFVSA+LTHRVTSKQVAVAGTNSKDIKAV +SRSDIPAC+A+G+ILA+RAREADVYTA YTPR+RDKFEGKIRAVVQSLIDNGID K+Y D Sbjct: 45 FFGVEDFLDDDNSRPYTYQKGKKSKNPNKHLSFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLKSRSDIPACLAVGQILADRAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGIDVKIYLD 187
BLAST of GR401900 vs. TrEMBL
Match: D7TUX5_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_30.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00021982001 PE=4 SV=1) HSP 1 Score: 263.462 bits (672), Expect = 9.553e-69 Identity = 131/143 (91.61%), Postives = 136/143 (95.10%), Query Frame = -1 Query: 202 FFGVEDFIDDDNSRPYTYQKGKKSKNPNKHISFKQRTVAYMEPFTLDVFISKRFVSAALTHRVTSKQVAVAGTNSKDIKAVFRSRSDIPACIAIGRILAERAREADVYTAFYTPRDRDKFEGKIRAVVQSLIDNGIDFKVYFD 630 FFGVEDF+DDDNSRPYTYQK KKSKNPNKHISFKQRT AYMEPFTLDV ISKRFVSA+LTHRVTSKQVAVAGTNSKDIKAV +SRSDIPAC+AIGRIL+ERAREADVYTA YTPRDRDKFEGKIRAVVQSLIDNGID KVY D Sbjct: 45 FFGVEDFLDDDNSRPYTYQKEKKSKNPNKHISFKQRTGAYMEPFTLDVLISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLKSRSDIPACLAIGRILSERAREADVYTASYTPRDRDKFEGKIRAVVQSLIDNGIDVKVYLD 187
BLAST of GR401900 vs. TrEMBL
Match: B9T8N7_RICCO (Structural constituent of ribosome, putative OS=Ricinus communis GN=RCOM_0084540 PE=4 SV=1) HSP 1 Score: 258.84 bits (660), Expect = 2.353e-67 Identity = 130/144 (90.28%), Postives = 136/144 (94.44%), Query Frame = -1 Query: 202 FFGVEDFIDDDNSRPYTYQKGKKSKNPN-KHISFKQRTVAYMEPFTLDVFISKRFVSAALTHRVTSKQVAVAGTNSKDIKAVFRSRSDIPACIAIGRILAERAREADVYTAFYTPRDRDKFEGKIRAVVQSLIDNGIDFKVYFD 630 FFGVEDF+DDDNSRPYTYQK KKSKNPN KH+SFKQRT AYMEPFTLDVFISKRFVSA+LTHRVTSKQVAVAGTNSKDIKA RSRSDIPAC+AIGRIL+ERAREADVYTA YTPR+RDKFEGKIRAVVQSLIDNGID KVY D Sbjct: 45 FFGVEDFLDDDNSRPYTYQKEKKSKNPNNKHMSFKQRTKAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAALRSRSDIPACLAIGRILSERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGIDIKVYLD 188
BLAST of GR401900 vs. TrEMBL
Match: A9NZ46_PICSI (Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1) HSP 1 Score: 256.914 bits (655), Expect = 8.942e-67 Identity = 123/143 (86.01%), Postives = 136/143 (95.10%), Query Frame = -1 Query: 202 FFGVEDFIDDDNSRPYTYQKGKKSKNPNKHISFKQRTVAYMEPFTLDVFISKRFVSAALTHRVTSKQVAVAGTNSKDIKAVFRSRSDIPACIAIGRILAERAREADVYTAFYTPRDRDKFEGKIRAVVQSLIDNGIDFKVYFD 630 FFGVEDF+DDDNS+PYTY K KKSKNP+KH+SFKQRT+AYM+PFTLDVFISKRFVSA++THRVTSKQVAVAGTNSKDIKA RS+SDIPAC+AIGRILAER+READVYTA YTPR+RDKFEGKIRAVVQSLIDNGID KVY + Sbjct: 44 FFGVEDFVDDDNSKPYTYMKEKKSKNPHKHVSFKQRTIAYMQPFTLDVFISKRFVSASITHRVTSKQVAVAGTNSKDIKAALRSKSDIPACLAIGRILAERSREADVYTAVYTPRERDKFEGKIRAVVQSLIDNGIDIKVYLN 186
BLAST of GR401900 vs. TrEMBL
Match: Q8GW22_ARATH (At1g08850 OS=Arabidopsis thaliana GN=At1g08845 PE=2 SV=1) HSP 1 Score: 254.218 bits (648), Expect = 5.796e-66 Identity = 122/143 (85.31%), Postives = 135/143 (94.41%), Query Frame = -1 Query: 202 FFGVEDFIDDDNSRPYTYQKGKKSKNPNKHISFKQRTVAYMEPFTLDVFISKRFVSAALTHRVTSKQVAVAGTNSKDIKAVFRSRSDIPACIAIGRILAERAREADVYTAFYTPRDRDKFEGKIRAVVQSLIDNGIDFKVYFD 630 FFGVED++DDD SRPYTYQK KKSKNP+KH+SFKQRTVAYMEPFTLDVFISKRFVSA+LTHRVT +QVAVAGTNSKD+KAV RSR DIPAC++IGRIL+ERA+EADVYTA YTPRD+DKFEGKIRAVVQSLIDNGID K+Y D Sbjct: 47 FFGVEDYVDDDTSRPYTYQKEKKSKNPDKHVSFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTCRQVAVAGTNSKDVKAVLRSRCDIPACMSIGRILSERAKEADVYTASYTPRDQDKFEGKIRAVVQSLIDNGIDVKIYLD 189
BLAST of GR401900 vs. TrEMBL
Match: D7KIV9_ARALY (Structural constituent of ribosome OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_470958 PE=4 SV=1) HSP 1 Score: 252.677 bits (644), Expect = 1.686e-65 Identity = 121/143 (84.62%), Postives = 135/143 (94.41%), Query Frame = -1 Query: 202 FFGVEDFIDDDNSRPYTYQKGKKSKNPNKHISFKQRTVAYMEPFTLDVFISKRFVSAALTHRVTSKQVAVAGTNSKDIKAVFRSRSDIPACIAIGRILAERAREADVYTAFYTPRDRDKFEGKIRAVVQSLIDNGIDFKVYFD 630 FFGVED++DDD SRPYTYQK KKSKNP+KH+SFKQRTVAYMEPFTLDVFISKRFVSA+LTHRVT +QVAVAGTNSKD+KAV RSR DIPAC++IGRIL+ERA+EADVYTA YTPRD++KFEGKIRAVVQSLIDNGID K+Y D Sbjct: 47 FFGVEDYVDDDTSRPYTYQKEKKSKNPDKHVSFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTCRQVAVAGTNSKDVKAVLRSRCDIPACMSIGRILSERAKEADVYTASYTPRDQEKFEGKIRAVVQSLIDNGIDVKIYLD 189
BLAST of GR401900 vs. TrEMBL
Match: Q8SB98_ORYSA (Putative uncharacterized protein OSJNBa0042H09.18 OS=Oryza sativa GN=OSJNBa0042H09.18 PE=4 SV=1) HSP 1 Score: 247.284 bits (630), Expect = 7.085e-64 Identity = 118/143 (82.52%), Postives = 133/143 (93.01%), Query Frame = -1 Query: 202 FFGVEDFIDDDNSRPYTYQKGKKSKNPNKHISFKQRTVAYMEPFTLDVFISKRFVSAALTHRVTSKQVAVAGTNSKDIKAVFRSRSDIPACIAIGRILAERAREADVYTAFYTPRDRDKFEGKIRAVVQSLIDNGIDFKVYFD 630 FFGVEDF+D+DNS+PYTY+K K+SKNP+KHISFKQRT+AYMEPFTLDVFISKRFVSA+LTHR T +QVAVAGTNSKDIKA +SRSDIPAC+A+GR LAERA+EADVYT YTPR+RDKFEGKIRAVVQSLIDNGI+ KVY D Sbjct: 45 FFGVEDFMDEDNSKPYTYKKEKRSKNPHKHISFKQRTIAYMEPFTLDVFISKRFVSASLTHRTTCRQVAVAGTNSKDIKAALKSRSDIPACLAVGRFLAERAKEADVYTCTYTPRERDKFEGKIRAVVQSLIDNGINVKVYLD 187
BLAST of GR401900 vs. TrEMBL
Match: Q7XC72_ORYSJ (Expressed protein OS=Oryza sativa subsp. japonica GN=Os10g0559900 PE=2 SV=1) HSP 1 Score: 247.284 bits (630), Expect = 7.085e-64 Identity = 118/143 (82.52%), Postives = 133/143 (93.01%), Query Frame = -1 Query: 202 FFGVEDFIDDDNSRPYTYQKGKKSKNPNKHISFKQRTVAYMEPFTLDVFISKRFVSAALTHRVTSKQVAVAGTNSKDIKAVFRSRSDIPACIAIGRILAERAREADVYTAFYTPRDRDKFEGKIRAVVQSLIDNGIDFKVYFD 630 FFGVEDF+D+DNS+PYTY+K K+SKNP+KHISFKQRT+AYMEPFTLDVFISKRFVSA+LTHR T +QVAVAGTNSKDIKA +SRSDIPAC+A+GR LAERA+EADVYT YTPR+RDKFEGKIRAVVQSLIDNGI+ KVY D Sbjct: 45 FFGVEDFMDEDNSKPYTYKKEKRSKNPHKHISFKQRTIAYMEPFTLDVFISKRFVSASLTHRTTCRQVAVAGTNSKDIKAALKSRSDIPACLAVGRFLAERAKEADVYTCTYTPRERDKFEGKIRAVVQSLIDNGINVKVYLD 187
BLAST of GR401900 vs. TrEMBL
Match: C5WSC9_SORBI (Putative uncharacterized protein Sb01g029100 OS=Sorghum bicolor GN=Sb01g029100 PE=4 SV=1) HSP 1 Score: 247.284 bits (630), Expect = 7.085e-64 Identity = 118/143 (82.52%), Postives = 134/143 (93.71%), Query Frame = -1 Query: 202 FFGVEDFIDDDNSRPYTYQKGKKSKNPNKHISFKQRTVAYMEPFTLDVFISKRFVSAALTHRVTSKQVAVAGTNSKDIKAVFRSRSDIPACIAIGRILAERAREADVYTAFYTPRDRDKFEGKIRAVVQSLIDNGIDFKVYFD 630 FFGVEDF+D+DNSRPYTY+K K+SKNP+KHISFKQRT+AYMEPFTLDVFISKRFVSA+LTHR T +QVAVAGTNSKDIKAV +SRSDIPAC+A+GR LAERA+EADV+T YTPR+RDKFEGKIRAVVQSLIDNGI+ K+Y D Sbjct: 45 FFGVEDFVDEDNSRPYTYKKEKRSKNPHKHISFKQRTIAYMEPFTLDVFISKRFVSASLTHRSTCRQVAVAGTNSKDIKAVLKSRSDIPACLAVGRFLAERAKEADVFTCTYTPRERDKFEGKIRAVVQSLIDNGINVKLYLD 187
BLAST of GR401900 vs. TrEMBL
Match: A2ZA70_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_34632 PE=4 SV=1) HSP 1 Score: 247.284 bits (630), Expect = 7.085e-64 Identity = 118/143 (82.52%), Postives = 133/143 (93.01%), Query Frame = -1 Query: 202 FFGVEDFIDDDNSRPYTYQKGKKSKNPNKHISFKQRTVAYMEPFTLDVFISKRFVSAALTHRVTSKQVAVAGTNSKDIKAVFRSRSDIPACIAIGRILAERAREADVYTAFYTPRDRDKFEGKIRAVVQSLIDNGIDFKVYFD 630 FFGVEDF+D+DNS+PYTY+K K+SKNP+KHISFKQRT+AYMEPFTLDVFISKRFVSA+LTHR T +QVAVAGTNSKDIKA +SRSDIPAC+A+GR LAERA+EADVYT YTPR+RDKFEGKIRAVVQSLIDNGI+ KVY D Sbjct: 45 FFGVEDFMDEDNSKPYTYKKEKRSKNPHKHISFKQRTIAYMEPFTLDVFISKRFVSASLTHRTTCRQVAVAGTNSKDIKAALKSRSDIPACLAVGRFLAERAKEADVYTCTYTPRERDKFEGKIRAVVQSLIDNGINVKVYLD 187
BLAST of GR401900 vs. TAIR peptide
Match: AT1G08845.2 (| Symbols: | Ribosomal L18p/L5e family protein | chr1:2838789-2840955 FORWARD LENGTH=234) HSP 1 Score: 254.218 bits (648), Expect = 4.172e-68 Identity = 122/143 (85.31%), Postives = 135/143 (94.41%), Query Frame = -1 Query: 202 FFGVEDFIDDDNSRPYTYQKGKKSKNPNKHISFKQRTVAYMEPFTLDVFISKRFVSAALTHRVTSKQVAVAGTNSKDIKAVFRSRSDIPACIAIGRILAERAREADVYTAFYTPRDRDKFEGKIRAVVQSLIDNGIDFKVYFD 630 FFGVED++DDD SRPYTYQK KKSKNP+KH+SFKQRTVAYMEPFTLDVFISKRFVSA+LTHRVT +QVAVAGTNSKD+KAV RSR DIPAC++IGRIL+ERA+EADVYTA YTPRD+DKFEGKIRAVVQSLIDNGID K+Y D Sbjct: 92 FFGVEDYVDDDTSRPYTYQKEKKSKNPDKHVSFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTCRQVAVAGTNSKDVKAVLRSRCDIPACMSIGRILSERAKEADVYTASYTPRDQDKFEGKIRAVVQSLIDNGIDVKIYLD 234
BLAST of GR401900 vs. TAIR peptide
Match: AT1G08845.1 (| Symbols: | Ribosomal L18p/L5e family protein | chr1:2839855-2840955 FORWARD LENGTH=189) HSP 1 Score: 254.218 bits (648), Expect = 4.172e-68 Identity = 122/143 (85.31%), Postives = 135/143 (94.41%), Query Frame = -1 Query: 202 FFGVEDFIDDDNSRPYTYQKGKKSKNPNKHISFKQRTVAYMEPFTLDVFISKRFVSAALTHRVTSKQVAVAGTNSKDIKAVFRSRSDIPACIAIGRILAERAREADVYTAFYTPRDRDKFEGKIRAVVQSLIDNGIDFKVYFD 630 FFGVED++DDD SRPYTYQK KKSKNP+KH+SFKQRTVAYMEPFTLDVFISKRFVSA+LTHRVT +QVAVAGTNSKD+KAV RSR DIPAC++IGRIL+ERA+EADVYTA YTPRD+DKFEGKIRAVVQSLIDNGID K+Y D Sbjct: 47 FFGVEDYVDDDTSRPYTYQKEKKSKNPDKHVSFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTCRQVAVAGTNSKDVKAVLRSRCDIPACMSIGRILSERAKEADVYTASYTPRDQDKFEGKIRAVVQSLIDNGIDVKIYLD 189
BLAST of GR401900 vs. TAIR peptide
Match: AT3G22450.1 (| Symbols: | Ribosomal L18p/L5e family protein | chr3:7962443-7963378 FORWARD LENGTH=311) HSP 1 Score: 111.694 bits (278), Expect = 3.344e-25 Identity = 55/116 (47.41%), Postives = 77/116 (66.38%), Query Frame = -1 Query: 211 KNPNKHISFKQRTVAYMEPFTLDVFISKRFVSAALTHRVTSKQVAVAGTNSKDIKAVFRSRSDIPACIAIGRILAERAREADVYTAFYTPRDRDKFEGKIRAVVQSLIDNGIDFKV 558 K + +F Q T + PF LD++ISK V A + HRVTSK V VA + SKD+K SR ++ AC A+G +LA+R+ E D++ YTPR DK EGK++ V+Q+LIDNG++ KV Sbjct: 179 KKRERTFTFNQLTAPFHYPFCLDIYISKESVRACVIHRVTSKVVTVAHSISKDMKFDLGSRRNVAACAAVGAVLAQRSLEDDIHDVIYTPRKGDKIEGKLQVVLQALIDNGVNVKV 294
BLAST of GR401900 vs. TAIR peptide
Match: AT3G20230.1 (| Symbols: | Ribosomal L18p/L5e family protein | chr3:7055639-7056679 REVERSE LENGTH=187) HSP 1 Score: 108.997 bits (271), Expect = 2.168e-24 Identity = 54/119 (45.38%), Postives = 81/119 (68.07%), Query Frame = -1 Query: 217 KGKKSKNPNKHISFKQRTVAYMEPFTLDVFISKRFVSAALTHRVTSKQVAVAGTNSKDIKAVFRSRSDIPACIAIGRILAERAREADVYTAFYTPRDRDKFEGKIRAVVQSLIDNGIDF 573 +G+ +K PN+ S+KQRT YM PF L+VF S++F+ A + HR TSK ++VA TN++DI+ S D AC IG+++AER+ EADVY Y PR ++ EGK+ V+ ++ ++GI F Sbjct: 68 RGEAAKRPNRK-SWKQRTDMYMRPFLLNVFFSRKFIHAKVMHRPTSKVISVATTNARDIRTNIPSLVDNEACRLIGKLIAERSMEADVYAVSYEPRKGERIEGKLGIVIDTIKEHGIIF 185
BLAST of GR401900 vs. TAIR peptide
Match: AT5G27820.1 (| Symbols: | Ribosomal L18p/L5e family protein | chr5:9860584-9860928 FORWARD LENGTH=114) HSP 1 Score: 53.5286 bits (127), Expect = 1.081e-7 Identity = 26/101 (25.74%), Postives = 49/101 (48.51%), Query Frame = -1 Query: 223 RTVAYMEPFTLDVFISKRFVSAALTHRVTSKQVAVAGTNSKDIKAVFRSRSDIPACIAIGRILAERAREADVYTAFYTPRDRDKFEGKIRAVVQSLIDNGI 525 R Y++P+ L + + +FV A + H T+ A + K ++ D+ A IG+IL ER D+ + ++ GK++AV+ S+ + G+ Sbjct: 11 RLFDYLKPYVLKMHFTNKFVHAQVIHSPTATVACSASSQEKALRETMDITRDVAAASKIGKILGERLLMKDIPAVTIQMKKEQRYHGKVKAVIDSVREAGV 111 The following BLAST results are available for this feature:
BLAST of GR401900 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl) Total hits: 10
BLAST of GR401900 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide) Total hits: 5
InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GR401900 ID=GR401900; Name=GR401900; organism=Cicer arietinum; type=EST; length=630bpback to top Annotated Terms
The
following terms have been associated with
this EST:
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