GR402844

EST Overview
NameGR402844
Unique NameGR402844
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length345
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Homology
BLAST of GR402844 vs. TrEMBL
Match: Q9AVE4_PEA (DNA-binding protein DF1 OS=Pisum sativum GN=DF1 PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 1.479e-20
Identity = 49/57 (85.96%), Postives = 54/57 (94.74%), Query Frame = 1
Query:  175 IIKNDNNGESNLMQPSSSRWPKTEVEALIKMRTSLDTKYQENGPKGPLWEEISGLMK 345
            I+K+DNNGES LMQ SSSRWPKTEVEALI++RT+LD KYQENGPKGPLWEEISGLMK
Sbjct:  523 IVKSDNNGES-LMQASSSRWPKTEVEALIRLRTTLDMKYQENGPKGPLWEEISGLMK 578          
BLAST of GR402844 vs. TrEMBL
Match: Q8W240_SOYBN (GT-2 factor (Fragment) OS=Glycine max PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 5.818e-17
Identity = 42/55 (76.36%), Postives = 47/55 (85.45%), Query Frame = 1
Query:  181 KNDNNGESNLMQPSSSRWPKTEVEALIKMRTSLDTKYQENGPKGPLWEEISGLMK 345
            K DNNGE+  M  SSSRWPK EV+ALI +RTSL+TKYQENGPKGPLWEEIS LM+
Sbjct:  162 KADNNGENLTMGASSSRWPKMEVQALINLRTSLETKYQENGPKGPLWEEISALMR 216          
BLAST of GR402844 vs. TrEMBL
Match: B9H7S0_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_801329 PE=4 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 1.871e-15
Identity = 39/61 (63.93%), Postives = 50/61 (81.97%), Query Frame = 1
Query:  163 DMEMIIKNDNNGESNLMQPSSSRWPKTEVEALIKMRTSLDTKYQENGPKGPLWEEISGLMK 345
            +++MI+K+DN G+ N    S SRWPK EVEALI++RT+LD KYQ+NGPKGPLWEEIS  M+
Sbjct:  385 NVDMIMKSDN-GDQNFTSASPSRWPKVEVEALIRIRTNLDCKYQDNGPKGPLWEEISARMR 444          
BLAST of GR402844 vs. TrEMBL
Match: B9GTJ3_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_551322 PE=4 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 1.871e-15
Identity = 41/57 (71.93%), Postives = 47/57 (82.46%), Query Frame = 1
Query:  175 IIKNDNNGESNLMQPSSSRWPKTEVEALIKMRTSLDTKYQENGPKGPLWEEISGLMK 345
            I+K+DN G+ N M  SSSRWPK EVEALI +RT+LD KYQENGPKGPLWEEIS  M+
Sbjct:  412 IMKSDN-GDQNFMSASSSRWPKVEVEALIGLRTNLDCKYQENGPKGPLWEEISAGMR 467          
BLAST of GR402844 vs. TrEMBL
Match: Q9C6K3_ARATH (GT-like trihelix DNA-binding protein, putative OS=Arabidopsis thaliana GN=At1g76880 PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 5.445e-15
Identity = 39/58 (67.24%), Postives = 46/58 (79.31%), Query Frame = 1
Query:  181 KNDNNGESNLM---QPSSSRWPKTEVEALIKMRTSLDTKYQENGPKGPLWEEISGLMK 345
            K DN G+ N+      SSSRWPK E+EALIK+RT+LD+KYQENGPKGPLWEEIS  M+
Sbjct:  389 KTDNGGDQNMTPAASASSSRWPKVEIEALIKLRTNLDSKYQENGPKGPLWEEISAGMR 446          
BLAST of GR402844 vs. TrEMBL
Match: D7SRB9_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_72.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00034523001 PE=4 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.213e-14
Identity = 40/56 (71.43%), Postives = 46/56 (82.14%), Query Frame = 1
Query:  181 KNDNNGES-NLMQPSSSRWPKTEVEALIKMRTSLDTKYQENGPKGPLWEEISGLMK 345
            K DN G + NL+  SSSRWPK EV+ALI++RTSLD KYQENGPKGPLWEEIS  M+
Sbjct:  267 KMDNGGGAENLVPTSSSRWPKAEVQALIRLRTSLDVKYQENGPKGPLWEEISAGMR 322          
BLAST of GR402844 vs. TrEMBL
Match: B9T2G0_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0453550 PE=4 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.213e-14
Identity = 39/56 (69.64%), Postives = 47/56 (83.93%), Query Frame = 1
Query:  178 IKNDNNGESNLMQPSSSRWPKTEVEALIKMRTSLDTKYQENGPKGPLWEEISGLMK 345
            IK+DN G+ + M  SSSRWPK EV+ALI +RT+LD+KYQENGPKGPLWEEIS  M+
Sbjct:  465 IKSDN-GDQSFMPASSSRWPKVEVQALIDLRTNLDSKYQENGPKGPLWEEISAGMR 519          
BLAST of GR402844 vs. TrEMBL
Match: D7KTX9_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_895569 PE=4 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 6.020e-14
Identity = 37/54 (68.52%), Postives = 45/54 (83.33%), Query Frame = 1
Query:  190 NNGESNLM--QPSSSRWPKTEVEALIKMRTSLDTKYQENGPKGPLWEEISGLMK 345
            +NG+ N+     SSSRWPK E+EALIK+RT+LD+KYQENGPKGPLWEEIS  M+
Sbjct:  384 DNGDQNMTPASASSSRWPKVEIEALIKLRTNLDSKYQENGPKGPLWEEISAGMR 437          
BLAST of GR402844 vs. TrEMBL
Match: B9S882_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1731940 PE=4 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.341e-13
Identity = 35/61 (57.38%), Postives = 48/61 (78.69%), Query Frame = 1
Query:  166 MEMIIK-NDNNGESNLMQPSSSRWPKTEVEALIKMRTSLDTKYQENGPKGPLWEEISGLMK 345
            +E ++K  +NN   N +Q  S+RWPK E+EALI++RT+LD +YQ++GPKGPLWEEIS  MK
Sbjct:  220 IEKVVKAQENNNVENYVQLGSTRWPKEEIEALIRLRTNLDIQYQDSGPKGPLWEEISAAMK 280          
BLAST of GR402844 vs. TrEMBL
Match: Q8LBM5_ARATH (Trihelix DNA-binding protein (GT2) OS=Arabidopsis thaliana PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.135e-12
Identity = 35/60 (58.33%), Postives = 45/60 (75.00%), Query Frame = 1
Query:  166 MEMIIKNDNNGESNLMQPSSSRWPKTEVEALIKMRTSLDTKYQENGPKGPLWEEISGLMK 345
            ++  IK  N   ++ + PSSSRWPKTEVEALI++R +L+  YQENG KGPLWEEIS  M+
Sbjct:  349 LDTTIKMGNYDNNHSVSPSSSRWPKTEVEALIRIRKNLEANYQENGTKGPLWEEISAGMR 408          
BLAST of GR402844 vs. TAIR peptide
Match: AT1G76880.1 (| Symbols: | Duplicated homeodomain-like superfamily protein | chr1:28865594-28867931 FORWARD LENGTH=603)

HSP 1 Score: 83.9593 bits (206), Expect = 2.108e-17
Identity = 39/58 (67.24%), Postives = 46/58 (79.31%), Query Frame = 1
Query:  181 KNDNNGESNLM---QPSSSRWPKTEVEALIKMRTSLDTKYQENGPKGPLWEEISGLMK 345
            K DN G+ N+      SSSRWPK E+EALIK+RT+LD+KYQENGPKGPLWEEIS  M+
Sbjct:  389 KTDNGGDQNMTPAASASSSRWPKVEIEALIKLRTNLDSKYQENGPKGPLWEEISAGMR 446          
BLAST of GR402844 vs. TAIR peptide
Match: AT1G76890.2 (| Symbols: GT2, AT-GT2 | Duplicated homeodomain-like superfamily protein | chr1:28873211-28875203 REVERSE LENGTH=575)

HSP 1 Score: 76.2554 bits (186), Expect = 4.396e-15
Identity = 35/60 (58.33%), Postives = 45/60 (75.00%), Query Frame = 1
Query:  166 MEMIIKNDNNGESNLMQPSSSRWPKTEVEALIKMRTSLDTKYQENGPKGPLWEEISGLMK 345
            ++  IK  N   ++ + PSSSRWPKTEVEALI++R +L+  YQENG KGPLWEEIS  M+
Sbjct:  376 LDTTIKMGNYDNNHSVSPSSSRWPKTEVEALIRIRKNLEANYQENGTKGPLWEEISAGMR 435          
BLAST of GR402844 vs. TAIR peptide
Match: AT1G33240.1 (| Symbols: AT-GTL1, AT-GTL2, GTL1 | GT-2-like 1 | chr1:12051859-12054320 REVERSE LENGTH=669)

HSP 1 Score: 62.003 bits (149), Expect = 8.579e-11
Identity = 31/59 (52.54%), Postives = 44/59 (74.58%), Query Frame = 1
Query:  169 EMIIKNDNNGESNLMQPSSSRWPKTEVEALIKMRTSLDTKYQENGPKGPLWEEISGLMK 345
            EM++ ++   +S+L  PSSSRWPK E+ ALI +R+ ++ +YQ+N PKG LWEEIS  MK
Sbjct:  420 EMVMSSE---QSSL--PSSSRWPKAEILALINLRSGMEPRYQDNVPKGLLWEEISTSMK 473          
The following BLAST results are available for this feature:
BLAST of GR402844 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
Q9AVE4_PEA1.479e-2085.96DNA-binding protein DF1 OS=Pisum sativum GN=DF1 PE... [more]
Q8W240_SOYBN5.818e-1776.36GT-2 factor (Fragment) OS=Glycine max PE=2 SV=1[more]
B9H7S0_POPTR1.871e-1563.93Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9GTJ3_POPTR1.871e-1571.93Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
Q9C6K3_ARATH5.445e-1567.24GT-like trihelix DNA-binding protein, putative OS=... [more]
D7SRB9_VITVI1.213e-1471.43Whole genome shotgun sequence of line PN40024, sca... [more]
B9T2G0_RICCO1.213e-1469.64Putative uncharacterized protein OS=Ricinus commun... [more]
D7KTX9_ARALY6.020e-1468.52Putative uncharacterized protein OS=Arabidopsis ly... [more]
B9S882_RICCO1.341e-1357.38Putative uncharacterized protein OS=Ricinus commun... [more]
Q8LBM5_ARATH1.135e-1258.33Trihelix DNA-binding protein (GT2) OS=Arabidopsis ... [more]
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BLAST of GR402844 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 3
Match NameE-valueIdentityDescription
AT1G76880.12.108e-1767.24| Symbols: | Duplicated homeodomain-like superfam... [more]
AT1G76890.24.396e-1558.33| Symbols: GT2, AT-GT2 | Duplicated homeodomain-li... [more]
AT1G33240.18.579e-1152.54| Symbols: AT-GTL1, AT-GTL2, GTL1 | GT-2-like 1 | ... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 10..21
score: NAcoord: 32..52
score
NoneNo IPR availableSEGsegsegcoord: 1..28
score
NoneNo IPR availableSEGsegsegcoord: 27..43
score

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GR402844 ID=GR402844; Name=GR402844; organism=Cicer arietinum; type=EST; length=345bp
GCAACTACACCAATGTCAATGTCAATGCCAACACCCCAACAAATTCAAGT
TCAAATTCCAACTTCATCAATGAAACAAACAACACCTGTTATTCCTCAAG
CTCCGCCATTGACAACGACACTGACACTGACATATCAACAGCAGCAGCCG
GAGCCGGCAAACGATATGGAAATGATAATTAAAAATGACAACAATGGTGA
GAGTAATTTAATGCAACCAAGTTCATCAAGGTGGCCAAAAACTGAGGTTG
AAGCATTGATAAAGATGAGAACAAGTCTTGATACAAAGTATCAAGAAAAT
GGACCTAAAGGGCCATTATGGGAAGAGATTTCAGGGCTGATGAAG
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