GR402844
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GR402844 vs. TrEMBL
Match: Q9AVE4_PEA (DNA-binding protein DF1 OS=Pisum sativum GN=DF1 PE=2 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 1.479e-20 Identity = 49/57 (85.96%), Postives = 54/57 (94.74%), Query Frame = 1 Query: 175 IIKNDNNGESNLMQPSSSRWPKTEVEALIKMRTSLDTKYQENGPKGPLWEEISGLMK 345 I+K+DNNGES LMQ SSSRWPKTEVEALI++RT+LD KYQENGPKGPLWEEISGLMK Sbjct: 523 IVKSDNNGES-LMQASSSRWPKTEVEALIRLRTTLDMKYQENGPKGPLWEEISGLMK 578
BLAST of GR402844 vs. TrEMBL
Match: Q8W240_SOYBN (GT-2 factor (Fragment) OS=Glycine max PE=2 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 5.818e-17 Identity = 42/55 (76.36%), Postives = 47/55 (85.45%), Query Frame = 1 Query: 181 KNDNNGESNLMQPSSSRWPKTEVEALIKMRTSLDTKYQENGPKGPLWEEISGLMK 345 K DNNGE+ M SSSRWPK EV+ALI +RTSL+TKYQENGPKGPLWEEIS LM+ Sbjct: 162 KADNNGENLTMGASSSRWPKMEVQALINLRTSLETKYQENGPKGPLWEEISALMR 216
BLAST of GR402844 vs. TrEMBL
Match: B9H7S0_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_801329 PE=4 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 1.871e-15 Identity = 39/61 (63.93%), Postives = 50/61 (81.97%), Query Frame = 1 Query: 163 DMEMIIKNDNNGESNLMQPSSSRWPKTEVEALIKMRTSLDTKYQENGPKGPLWEEISGLMK 345 +++MI+K+DN G+ N S SRWPK EVEALI++RT+LD KYQ+NGPKGPLWEEIS M+ Sbjct: 385 NVDMIMKSDN-GDQNFTSASPSRWPKVEVEALIRIRTNLDCKYQDNGPKGPLWEEISARMR 444
BLAST of GR402844 vs. TrEMBL
Match: B9GTJ3_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_551322 PE=4 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 1.871e-15 Identity = 41/57 (71.93%), Postives = 47/57 (82.46%), Query Frame = 1 Query: 175 IIKNDNNGESNLMQPSSSRWPKTEVEALIKMRTSLDTKYQENGPKGPLWEEISGLMK 345 I+K+DN G+ N M SSSRWPK EVEALI +RT+LD KYQENGPKGPLWEEIS M+ Sbjct: 412 IMKSDN-GDQNFMSASSSRWPKVEVEALIGLRTNLDCKYQENGPKGPLWEEISAGMR 467
BLAST of GR402844 vs. TrEMBL
Match: Q9C6K3_ARATH (GT-like trihelix DNA-binding protein, putative OS=Arabidopsis thaliana GN=At1g76880 PE=1 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 5.445e-15 Identity = 39/58 (67.24%), Postives = 46/58 (79.31%), Query Frame = 1 Query: 181 KNDNNGESNLM---QPSSSRWPKTEVEALIKMRTSLDTKYQENGPKGPLWEEISGLMK 345 K DN G+ N+ SSSRWPK E+EALIK+RT+LD+KYQENGPKGPLWEEIS M+ Sbjct: 389 KTDNGGDQNMTPAASASSSRWPKVEIEALIKLRTNLDSKYQENGPKGPLWEEISAGMR 446
BLAST of GR402844 vs. TrEMBL
Match: D7SRB9_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_72.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00034523001 PE=4 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.213e-14 Identity = 40/56 (71.43%), Postives = 46/56 (82.14%), Query Frame = 1 Query: 181 KNDNNGES-NLMQPSSSRWPKTEVEALIKMRTSLDTKYQENGPKGPLWEEISGLMK 345 K DN G + NL+ SSSRWPK EV+ALI++RTSLD KYQENGPKGPLWEEIS M+ Sbjct: 267 KMDNGGGAENLVPTSSSRWPKAEVQALIRLRTSLDVKYQENGPKGPLWEEISAGMR 322
BLAST of GR402844 vs. TrEMBL
Match: B9T2G0_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0453550 PE=4 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.213e-14 Identity = 39/56 (69.64%), Postives = 47/56 (83.93%), Query Frame = 1 Query: 178 IKNDNNGESNLMQPSSSRWPKTEVEALIKMRTSLDTKYQENGPKGPLWEEISGLMK 345 IK+DN G+ + M SSSRWPK EV+ALI +RT+LD+KYQENGPKGPLWEEIS M+ Sbjct: 465 IKSDN-GDQSFMPASSSRWPKVEVQALIDLRTNLDSKYQENGPKGPLWEEISAGMR 519
BLAST of GR402844 vs. TrEMBL
Match: D7KTX9_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_895569 PE=4 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 6.020e-14 Identity = 37/54 (68.52%), Postives = 45/54 (83.33%), Query Frame = 1 Query: 190 NNGESNLM--QPSSSRWPKTEVEALIKMRTSLDTKYQENGPKGPLWEEISGLMK 345 +NG+ N+ SSSRWPK E+EALIK+RT+LD+KYQENGPKGPLWEEIS M+ Sbjct: 384 DNGDQNMTPASASSSRWPKVEIEALIKLRTNLDSKYQENGPKGPLWEEISAGMR 437
BLAST of GR402844 vs. TrEMBL
Match: B9S882_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1731940 PE=4 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.341e-13 Identity = 35/61 (57.38%), Postives = 48/61 (78.69%), Query Frame = 1 Query: 166 MEMIIK-NDNNGESNLMQPSSSRWPKTEVEALIKMRTSLDTKYQENGPKGPLWEEISGLMK 345 +E ++K +NN N +Q S+RWPK E+EALI++RT+LD +YQ++GPKGPLWEEIS MK Sbjct: 220 IEKVVKAQENNNVENYVQLGSTRWPKEEIEALIRLRTNLDIQYQDSGPKGPLWEEISAAMK 280
BLAST of GR402844 vs. TrEMBL
Match: Q8LBM5_ARATH (Trihelix DNA-binding protein (GT2) OS=Arabidopsis thaliana PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.135e-12 Identity = 35/60 (58.33%), Postives = 45/60 (75.00%), Query Frame = 1 Query: 166 MEMIIKNDNNGESNLMQPSSSRWPKTEVEALIKMRTSLDTKYQENGPKGPLWEEISGLMK 345 ++ IK N ++ + PSSSRWPKTEVEALI++R +L+ YQENG KGPLWEEIS M+ Sbjct: 349 LDTTIKMGNYDNNHSVSPSSSRWPKTEVEALIRIRKNLEANYQENGTKGPLWEEISAGMR 408
BLAST of GR402844 vs. TAIR peptide
Match: AT1G76880.1 (| Symbols: | Duplicated homeodomain-like superfamily protein | chr1:28865594-28867931 FORWARD LENGTH=603) HSP 1 Score: 83.9593 bits (206), Expect = 2.108e-17 Identity = 39/58 (67.24%), Postives = 46/58 (79.31%), Query Frame = 1 Query: 181 KNDNNGESNLM---QPSSSRWPKTEVEALIKMRTSLDTKYQENGPKGPLWEEISGLMK 345 K DN G+ N+ SSSRWPK E+EALIK+RT+LD+KYQENGPKGPLWEEIS M+ Sbjct: 389 KTDNGGDQNMTPAASASSSRWPKVEIEALIKLRTNLDSKYQENGPKGPLWEEISAGMR 446
BLAST of GR402844 vs. TAIR peptide
Match: AT1G76890.2 (| Symbols: GT2, AT-GT2 | Duplicated homeodomain-like superfamily protein | chr1:28873211-28875203 REVERSE LENGTH=575) HSP 1 Score: 76.2554 bits (186), Expect = 4.396e-15 Identity = 35/60 (58.33%), Postives = 45/60 (75.00%), Query Frame = 1 Query: 166 MEMIIKNDNNGESNLMQPSSSRWPKTEVEALIKMRTSLDTKYQENGPKGPLWEEISGLMK 345 ++ IK N ++ + PSSSRWPKTEVEALI++R +L+ YQENG KGPLWEEIS M+ Sbjct: 376 LDTTIKMGNYDNNHSVSPSSSRWPKTEVEALIRIRKNLEANYQENGTKGPLWEEISAGMR 435
BLAST of GR402844 vs. TAIR peptide
Match: AT1G33240.1 (| Symbols: AT-GTL1, AT-GTL2, GTL1 | GT-2-like 1 | chr1:12051859-12054320 REVERSE LENGTH=669) HSP 1 Score: 62.003 bits (149), Expect = 8.579e-11 Identity = 31/59 (52.54%), Postives = 44/59 (74.58%), Query Frame = 1 Query: 169 EMIIKNDNNGESNLMQPSSSRWPKTEVEALIKMRTSLDTKYQENGPKGPLWEEISGLMK 345 EM++ ++ +S+L PSSSRWPK E+ ALI +R+ ++ +YQ+N PKG LWEEIS MK Sbjct: 420 EMVMSSE---QSSL--PSSSRWPKAEILALINLRSGMEPRYQDNVPKGLLWEEISTSMK 473 The following BLAST results are available for this feature:
BLAST of GR402844 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl) Total hits: 10
BLAST of GR402844 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide) Total hits: 3
InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GR402844 ID=GR402844; Name=GR402844; organism=Cicer arietinum; type=EST; length=345bpback to top |