GR403384

EST Overview


Name	GR403384
Unique Name	GR403384
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	838

Libraries


Library Name	Type
LIBEST_024785 ICCV2 Salinity-stressed chickpea root cDNA library	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

[Close]

BLAST of GR403384 vs. SwissProt
Match: POLX_TOBAC (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 1.750e-32
Identity = 67/192 (34.90%), Postives = 106/192 (55.21%), Query Frame = 1

Query:   91 CFESIFVSSNNDDIMLWHLRLGHPSFPYLKHLFPK--LFSKKDPSLFHCETCEFAKHHRSSFSAQPYKQSKPFAVIHSDVWGPNRINTFSNKKWFITFIDDHTRICWVYLLKEKSEVGQVVKNFFKMVHTQYQTNIQVFRSDNGKEYFNILLSDFFLANGVVHQSSCVNTPQQNGIAERKNRHLLEVARALL 660
            C   +  + +   + LWH R+GH S   L+ L  K  +   K  ++  C+ C F K HR SF     ++     +++SDV GP  I +    K+F+TFIDD +R  WVY+LK K +V QV + F  +V  +    ++  RSDNG EY +    ++  ++G+ H+ +   TPQ NG+AER NR ++E  R++L
Sbjct:  409 CQGELNAAQDEISVDLWHKRMGHMSEKGLQILAKKSLISYAKGTTVKPCDYCLFGKQHRVSFQTSSERKLNILDLVYSDVCGPMEIESMGGNKYFVTFIDDASRKLWVYILKTKDQVFQVFQKFHALVERETGRKLKRLRSDNGGEYTSREFEEYCSSHGIRHEKTVPGTPQHNGVAERMNRTIVEKVRSML 600

HSP 2 Score: 32.3426 bits (72), Expect = 1.750e-32
Identity = 13/19 (68.42%), Postives = 15/19 (78.95%), Query Frame = 3

Query:  672 VPKYLWGEAILTASYLINR 728
            +PK  WGEA+ TA YLINR
Sbjct:  605 LPKSFWGEAVQTACYLINR 623

[Close]

BLAST of GR403384 vs. SwissProt
Match: COPIA_DROME (Copia protein OS=Drosophila melanogaster GN=GIP PE=1 SV=3)

HSP 1 Score: 97.4413 bits (241), Expect = 3.289e-23
Identity = 63/200 (31.50%), Postives = 99/200 (49.50%), Query Frame = 1

Query:  112 SSNNDDIMLWHLRLGHPSFPYLKHLFPK-LFSKKDPSLFH-----CETCEFAKHHRSSFSAQPYKQSK-------PFAVIHSDVWGPNRINTFSNKKWFITFIDDHTRICWVYLLKEKSEVGQVVKNFFKMVHTQYQTNIQVFRSDNGKEYFNILLSDFFLANGVVHQSSCVNTPQQNGIAERKNRHLLEVARALLFANK 672
            + + ++  LWH R GH S   L  +  K +FS  D SL +     CE CE   + + +    P+KQ K       P  V+HSDV GP    T  +K +F+ F+D  T  C  YL+K KS+V  + ++F       +   +     DNG+EY +  +  F +  G+ +  +  +TPQ NG++ER  R + E AR ++   K
Sbjct:  409 AKHKNNFRLWHERFGHISDGKLLEIKRKNMFS--DQSLLNNLELSCEICEPCLNGKQA--RLPFKQLKDKTHIKRPLFVVHSDVCGPITPVTLDDKNYFVIFVDQFTHYCVTYLIKYKSDVFSMFQDFVAKSEAHFNLKVVYLYIDNGREYLSNEMRQFCVKKGISYHLTVPHTPQLNGVSERMIRTITEKARTMVSGAK 604

HSP 2 Score: 32.3426 bits (72), Expect = 3.289e-23
Identity = 13/17 (76.47%), Postives = 15/17 (88.24%), Query Frame = 3

Query:  678 KYLWGEAILTASYLINR 728
            K  WGEA+LTA+YLINR
Sbjct:  607 KSFWGEAVLTATYLINR 623

[Close]

BLAST of GR403384 vs. SwissProt
Match: YO22B_YEAST (Transposon Ty2-OR2 Gag-Pol polyprotein OS=Saccharomyces cerevisiae GN=TY2B-OR2 PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 9.072e-16
Identity = 60/205 (29.27%), Postives = 92/205 (44.88%), Query Frame = 1

Query:  112 SSNNDDIMLWHLRLGHPSFPYLKHLFPK---LFSKK------DPSLFHCETC---EFAKHHRSSFSAQPYKQS-KPFAVIHSDVWGPNRINTFSNKKWFITFIDDHTRICWVYLLKEKSE--VGQVVKNFFKMVHTQYQTNIQVFRSDNGKEYFNILLSDFFLANGVVHQSSCVNTPQQNGIAERKNRHLLEVARALLFANKFQN 681
            S N     L H  LGH +F  ++    K    + K+      + S + C  C   +  KH     S   Y++S +PF  +H+D++GP      S   +FI+F D+ TR  WVY L ++ E  +  V  +    +  Q+   + V + D G EY N  L  FF   G+    +     + +G+AER NR LL   R LL  +   N
Sbjct:  585 SVNKYPYPLIHRMLGHANFRSIQKSLKKNAVTYLKESDIEWSNASTYQCPDCLIGKSTKHRHVKGSRLKYQESYEPFQYLHTDIFGPVHHLPKSAPSYFISFTDEKTRFQWVYPLHDRREESILNVFTSILAFIKNQFNARVLVIQMDRGSEYTNKTLHKFFTNRGITACYTTTADSRAHGVAERLNRTLLNDCRTLLHCSGLPN 789

[Close]

BLAST of GR403384 vs. SwissProt
Match: YO21B_YEAST (Transposon Ty2-OR1 Gag-Pol polyprotein OS=Saccharomyces cerevisiae GN=TY2B-OR1 PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 9.072e-16
Identity = 60/205 (29.27%), Postives = 92/205 (44.88%), Query Frame = 1

Query:  112 SSNNDDIMLWHLRLGHPSFPYLKHLFPK---LFSKK------DPSLFHCETC---EFAKHHRSSFSAQPYKQS-KPFAVIHSDVWGPNRINTFSNKKWFITFIDDHTRICWVYLLKEKSE--VGQVVKNFFKMVHTQYQTNIQVFRSDNGKEYFNILLSDFFLANGVVHQSSCVNTPQQNGIAERKNRHLLEVARALLFANKFQN 681
            S N     L H  LGH +F  ++    K    + K+      + S + C  C   +  KH     S   Y++S +PF  +H+D++GP      S   +FI+F D+ TR  WVY L ++ E  +  V  +    +  Q+   + V + D G EY N  L  FF   G+    +     + +G+AER NR LL   R LL  +   N
Sbjct:  585 SVNKYPYPLIHRMLGHANFRSIQKSLKKNAVTYLKESDIEWSNASTYQCPDCLIGKSTKHRHVKGSRLKYQESYEPFQYLHTDIFGPVHHLPKSAPSYFISFTDEKTRFQWVYPLHDRREESILNVFTSILAFIKNQFNARVLVIQMDRGSEYTNKTLHKFFTNRGITACYTTTADSRAHGVAERLNRTLLNDCRTLLHCSGLPN 789

[Close]

BLAST of GR403384 vs. SwissProt
Match: YL22B_YEAST (Transposon Ty2-LR2 Gag-Pol polyprotein OS=Saccharomyces cerevisiae GN=TY2B-LR2 PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 9.072e-16
Identity = 60/205 (29.27%), Postives = 92/205 (44.88%), Query Frame = 1

Query:  112 SSNNDDIMLWHLRLGHPSFPYLKHLFPK---LFSKK------DPSLFHCETC---EFAKHHRSSFSAQPYKQS-KPFAVIHSDVWGPNRINTFSNKKWFITFIDDHTRICWVYLLKEKSE--VGQVVKNFFKMVHTQYQTNIQVFRSDNGKEYFNILLSDFFLANGVVHQSSCVNTPQQNGIAERKNRHLLEVARALLFANKFQN 681
            S N     L H  LGH +F  ++    K    + K+      + S + C  C   +  KH     S   Y++S +PF  +H+D++GP      S   +FI+F D+ TR  WVY L ++ E  +  V  +    +  Q+   + V + D G EY N  L  FF   G+    +     + +G+AER NR LL   R LL  +   N
Sbjct:  585 SVNKYPYPLIHRMLGHANFRSIQKSLKKNAVTYLKESDIEWSNASTYQCPDCLIGKSTKHRHVKGSRLKYQESYEPFQYLHTDIFGPVHHLPKSAPSYFISFTDEKTRFQWVYPLHDRREESILNVFTSILAFIKNQFNARVLVIQMDRGSEYTNKTLHKFFTNRGITACYTTTADSRAHGVAERLNRTLLNDCRTLLHCSGLPN 789

[Close]

BLAST of GR403384 vs. SwissProt
Match: YL21B_YEAST (Transposon Ty2-LR1 Gag-Pol polyprotein OS=Saccharomyces cerevisiae GN=TY2B-LR1 PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 9.072e-16
Identity = 60/205 (29.27%), Postives = 92/205 (44.88%), Query Frame = 1

Query:  112 SSNNDDIMLWHLRLGHPSFPYLKHLFPK---LFSKK------DPSLFHCETC---EFAKHHRSSFSAQPYKQS-KPFAVIHSDVWGPNRINTFSNKKWFITFIDDHTRICWVYLLKEKSE--VGQVVKNFFKMVHTQYQTNIQVFRSDNGKEYFNILLSDFFLANGVVHQSSCVNTPQQNGIAERKNRHLLEVARALLFANKFQN 681
            S N     L H  LGH +F  ++    K    + K+      + S + C  C   +  KH     S   Y++S +PF  +H+D++GP      S   +FI+F D+ TR  WVY L ++ E  +  V  +    +  Q+   + V + D G EY N  L  FF   G+    +     + +G+AER NR LL   R LL  +   N
Sbjct:  585 SVNKYPYPLIHRMLGHANFRSIQKSLKKNAVTYLKESDIEWSNASTYQCPDCLIGKSTKHRHVKGSRLKYQESYEPFQYLHTDIFGPVHHLPKSAPSYFISFTDEKTRFQWVYPLHDRREESILNVFTSILAFIKNQFNARVLVIQMDRGSEYTNKTLHKFFTNRGITACYTTTADSRAHGVAERLNRTLLNDCRTLLHCSGLPN 789

[Close]

BLAST of GR403384 vs. SwissProt
Match: YG21B_YEAST (Transposon Ty2-GR1 Gag-Pol polyprotein OS=Saccharomyces cerevisiae GN=TY2B-GR1 PE=3 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 9.072e-16
Identity = 60/205 (29.27%), Postives = 92/205 (44.88%), Query Frame = 1

Query:  112 SSNNDDIMLWHLRLGHPSFPYLKHLFPK---LFSKK------DPSLFHCETC---EFAKHHRSSFSAQPYKQS-KPFAVIHSDVWGPNRINTFSNKKWFITFIDDHTRICWVYLLKEKSE--VGQVVKNFFKMVHTQYQTNIQVFRSDNGKEYFNILLSDFFLANGVVHQSSCVNTPQQNGIAERKNRHLLEVARALLFANKFQN 681
            S N     L H  LGH +F  ++    K    + K+      + S + C  C   +  KH     S   Y++S +PF  +H+D++GP      S   +FI+F D+ TR  WVY L ++ E  +  V  +    +  Q+   + V + D G EY N  L  FF   G+    +     + +G+AER NR LL   R LL  +   N
Sbjct:  585 SVNKYPYPLIHRMLGHANFRSIQKSLKKNAVTYLKESDIEWSNASTYQCPDCLIGKSTKHRHVKGSRLKYQESYEPFQYLHTDIFGPVHHLPKSAPSYFISFTDEKTRFQWVYPLHDRREESILNVFTSILAFIKNQFNARVLVIQMDRGSEYTNKTLHKFFTNRGITACYTTTADSRAHGVAERLNRTLLNDCRTLLHCSGLPN 789

[Close]

BLAST of GR403384 vs. SwissProt
Match: YF21B_YEAST (Transposon Ty2-F/Ty2-GR2 Gag-Pol polyprotein OS=Saccharomyces cerevisiae GN=TY2B-F PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 9.072e-16
Identity = 60/205 (29.27%), Postives = 92/205 (44.88%), Query Frame = 1

Query:  112 SSNNDDIMLWHLRLGHPSFPYLKHLFPK---LFSKK------DPSLFHCETC---EFAKHHRSSFSAQPYKQS-KPFAVIHSDVWGPNRINTFSNKKWFITFIDDHTRICWVYLLKEKSE--VGQVVKNFFKMVHTQYQTNIQVFRSDNGKEYFNILLSDFFLANGVVHQSSCVNTPQQNGIAERKNRHLLEVARALLFANKFQN 681
            S N     L H  LGH +F  ++    K    + K+      + S + C  C   +  KH     S   Y++S +PF  +H+D++GP      S   +FI+F D+ TR  WVY L ++ E  +  V  +    +  Q+   + V + D G EY N  L  FF   G+    +     + +G+AER NR LL   R LL  +   N
Sbjct:  585 SVNKYPYPLIHRMLGHANFRSIQKSLKKNAVTYLKESDIEWSNASTYQCPDCLIGKSTKHRHVKGSRLKYQESYEPFQYLHTDIFGPVHHLPKSAPSYFISFTDEKTRFQWVYPLHDRREESILNVFTSILAFIKNQFNARVLVIQMDRGSEYTNKTLHKFFTNRGITACYTTTADSRAHGVAERLNRTLLNDCRTLLHCSGLPN 789

[Close]

BLAST of GR403384 vs. SwissProt
Match: YD23B_YEAST (Transposon Ty2-DR3 Gag-Pol polyprotein OS=Saccharomyces cerevisiae GN=TY2B-DR3 PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 9.072e-16
Identity = 60/205 (29.27%), Postives = 92/205 (44.88%), Query Frame = 1

Query:  112 SSNNDDIMLWHLRLGHPSFPYLKHLFPK---LFSKK------DPSLFHCETC---EFAKHHRSSFSAQPYKQS-KPFAVIHSDVWGPNRINTFSNKKWFITFIDDHTRICWVYLLKEKSE--VGQVVKNFFKMVHTQYQTNIQVFRSDNGKEYFNILLSDFFLANGVVHQSSCVNTPQQNGIAERKNRHLLEVARALLFANKFQN 681
            S N     L H  LGH +F  ++    K    + K+      + S + C  C   +  KH     S   Y++S +PF  +H+D++GP      S   +FI+F D+ TR  WVY L ++ E  +  V  +    +  Q+   + V + D G EY N  L  FF   G+    +     + +G+AER NR LL   R LL  +   N
Sbjct:  585 SVNKYPYPLIHRMLGHANFRSIQKSLKKNAVTYLKESDIEWSNASTYQCPDCLIGKSTKHRHIKGSRLKYQESYEPFQYLHTDIFGPVHHLPKSAPSYFISFTDEKTRFQWVYPLHDRREESILNVFTSILAFIKNQFNARVLVIQMDRGSEYTNKTLHKFFTNRGITACYTTTADSRAHGVAERLNRTLLNDCRTLLHCSGLPN 789

[Close]

BLAST of GR403384 vs. SwissProt
Match: YD22B_YEAST (Transposon Ty2-DR2 Gag-Pol polyprotein OS=Saccharomyces cerevisiae GN=TY2B-DR2 PE=3 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 9.072e-16
Identity = 60/205 (29.27%), Postives = 92/205 (44.88%), Query Frame = 1

Query:  112 SSNNDDIMLWHLRLGHPSFPYLKHLFPK---LFSKK------DPSLFHCETC---EFAKHHRSSFSAQPYKQS-KPFAVIHSDVWGPNRINTFSNKKWFITFIDDHTRICWVYLLKEKSE--VGQVVKNFFKMVHTQYQTNIQVFRSDNGKEYFNILLSDFFLANGVVHQSSCVNTPQQNGIAERKNRHLLEVARALLFANKFQN 681
            S N     L H  LGH +F  ++    K    + K+      + S + C  C   +  KH     S   Y++S +PF  +H+D++GP      S   +FI+F D+ TR  WVY L ++ E  +  V  +    +  Q+   + V + D G EY N  L  FF   G+    +     + +G+AER NR LL   R LL  +   N
Sbjct:  585 SVNKYPYPLIHRMLGHANFRSIQKSLKKNAVTYLKESDIEWSNASTYQCPDCLIGKSTKHRHVKGSRLKYQESYEPFQYLHTDIFGPVHHLPKSAPSYFISFTDEKTRFQWVYPLHDRREESILNVFTSILAFIKNQFNARVLVIQMDRGSEYTNKTLHKFFTNRGITACYTTTADSRAHGVAERLNRTLLNDCRTLLHCSGLPN 789

[Close]

BLAST of GR403384 vs. TrEMBL
Match: A5AYJ3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_041073 PE=4 SV=1)

HSP 1 Score: 326.635 bits (836), Expect = 2.429e-95
Identity = 156/224 (69.64%), Postives = 182/224 (81.25%), Query Frame = 1

Query:    1 GKTIGNAKESGGLYYLDNGLDFKDQQKTSTCFESIFVSSNNDDIMLWHLRLGHPSFPYLKHLFPKLFSKKDPSLFHCETCEFAKHHRSSFSAQPYKQSKPFAVIHSDVWGPNRINTFSNKKWFITFIDDHTRICWVYLLKEKSEVGQVVKNFFKMVHTQYQTNIQVFRSDNGKEYFNILLSDFFLANGVVHQSSCVNTPQQNGIAERKNRHLLEVARALLFANK 672
            G+TIGNA+E GGLY+ +NG + +   + STCFESI V+S+ DDI+LWH RLGHPSF YLKHLFP LF  K+PS F CE CE AKHHR+SF  QPY+ SKPF++IHSDVWGP+RI+T S KKWF+TFIDDHTR+ WVYLL+EKSEV +V K F+ MV TQ+QT IQVFRSDNGKEY N  L  FFL  G+VHQSSC +TPQQNGIAERKN+HLLEVARAL F  K
Sbjct:  453 GRTIGNAREIGGLYFFENGSESRKPIQ-STCFESISVASS-DDIILWHYRLGHPSFQYLKHLFPSLFRNKNPSSFQCEFCELAKHHRTSFPLQPYRISKPFSLIHSDVWGPSRISTLSGKKWFVTFIDDHTRVSWVYLLREKSEVEEVFKIFYTMVLTQFQTKIQVFRSDNGKEYINKALGKFFLEKGIVHQSSCNDTPQQNGIAERKNKHLLEVARALCFTTK 674

HSP 2 Score: 48.521 bits (114), Expect = 2.429e-95
Identity = 24/34 (70.59%), Postives = 26/34 (76.47%), Query Frame = 3

Query:  672 VPKYLWGEAILTASYLINRCHLK-FRFHTPLDVF 770
            VPKYLWGEAILTA+YLINR   +   F TPL VF
Sbjct:  675 VPKYLWGEAILTATYLINRMPTRILNFKTPLQVF 708

[Close]

BLAST of GR403384 vs. TrEMBL
Match: Q04358_SOLTU (Potato DNA for copia-like transposable element OS=Solanum tuberosum PE=4 SV=1)

HSP 1 Score: 280.026 bits (715), Expect = 1.455e-80
Identity = 137/227 (60.35%), Postives = 166/227 (73.13%), Query Frame = 1

Query:    1 GKTIGNAKESGGLYYLDNGLDFKDQQKTSTCFESIFVSSNN--DDIMLWHLRLGHPSFPYLKHLFPKLFSKKDPSLFHCETCEFAKHH-RSSFSAQPYKQSKPFAVIHSDVWGPNRINTFSNKKWFITFIDDHTRICWVYLLKEKSEVGQVVKNFFKMVHTQYQTNIQVFRSDNGKEYFNILLSDFFLANGVVHQSSCVNTPQQNGIAERKNRHLLEVARALLFANK 672
            GK IG+A+ESGGLY+LDNG         S     IF++S    + +MLWH  LGHPSF YL+HL P+LF  K+PSLF CE CE AKHH  +SF +Q Y+ SKPF +IHSDVWGP+RI+T   K+WF+TFIDDHTR+ WV+LLK KSEV  V + F  MV TQ+   I++FRSDNG+E+FN  L  FF   GVVHQSSC +TPQQNGIAERKNRHLLE  RAL+F +K
Sbjct:   63 GKMIGSARESGGLYFLDNG-------NNSLQLNPIFLNSTFVLNKVMLWHYGLGHPSFYYLRHLLPQLFRNKNPSLFQCEFCEMAKHHVDTSFPSQRYQASKPFTMIHSDVWGPSRISTMFGKRWFVTFIDDHTRLSWVFLLKGKSEVKNVFETFHVMVETQFNEKIKIFRSDNGREFFNEQLGSFFRKTGVVHQSSCPDTPQQNGIAERKNRHLLEATRALMFTSK 282

HSP 2 Score: 45.8246 bits (107), Expect = 1.455e-80
Identity = 24/46 (52.17%), Postives = 32/46 (69.57%), Query Frame = 3

Query:  672 VPKYLWGEAILTASYLINRCHLK-FRFHTPLDVF-ELFPLTSVSAD 803
            VP++LWGEA+LTA+YLINR   +   F TP  VF E FP + ++ D
Sbjct:  283 VPQHLWGEALLTATYLINRMPSRPLEFKTPFKVFRESFPSSRLTTD 328

[Close]

BLAST of GR403384 vs. TrEMBL
Match: A5C6A5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_042891 PE=4 SV=1)

HSP 1 Score: 280.411 bits (716), Expect = 3.838e-78
Identity = 132/223 (59.19%), Postives = 162/223 (72.65%), Query Frame = 1

Query:    1 GKTIGNAKESGGLYYLDNGLDFKDQQKTSTCFESIFVSSNNDDIMLWHLRLGHPSFPYLKHLFPKLFSKKDPSLFHCETCEFAKHHRSSFSAQPYKQSKPFAVIHSDVWGPNRINTFSNKKWFITFIDDHTRICWVYLLKEKSEVGQVVKNFFKMVHTQYQTNIQVFRSDNGKEYFNILLSDFFLANGVVHQSSCVNTPQQNGIAERKNRHLLEVARALLFAN 669
            GKTIG+AKE  GLYY D   D   Q   + C  + +  S + +++LWH R+GHPSF YLKHLFP L S K    F CE CE AKHHR+SF    YK S PF +IHSD+WGP+R    ++KKWFITFIDDHTR+CWVYLL +K+EV  V  NF  M+ TQ+ T IQ+ R+DNG EYFN  LS +   NG++HQSSCV+TPQQNG+AERKNRH+LEVARALLF++
Sbjct:  509 GKTIGSAKEREGLYYFDE-TDVLGQSSPTVCNSTSY--SKDSELLLWHKRMGHPSFQYLKHLFPSLCSNKTILDFQCEVCELAKHHRTSFPKSKYKPSIPFTLIHSDLWGPSRTPNRTHKKWFITFIDDHTRLCWVYLLTDKTEVRSVFMNFHYMIQTQFHTKIQILRTDNGTEYFNHSLSTYLQENGIIHQSSCVDTPQQNGVAERKNRHILEVARALLFSS 728

HSP 2 Score: 37.3502 bits (85), Expect = 3.838e-78
Identity = 21/45 (46.67%), Postives = 28/45 (62.22%), Query Frame = 3

Query:  672 VPKYLWGEAILTASYLINRCHLK-FRFHTPLDVF-ELFPLTSVSA 800
            +P   WG++ILTA+YLINR   +   F TPL  F E FP + + A
Sbjct:  730 MPTQFWGDSILTATYLINRMPSRVLSFVTPLQKFHEFFPHSRLDA 774

[Close]

BLAST of GR403384 vs. TrEMBL
Match: A5B9Y8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_017108 PE=4 SV=1)

HSP 1 Score: 270.781 bits (691), Expect = 1.111e-77
Identity = 123/220 (55.91%), Postives = 160/220 (72.73%), Query Frame = 1

Query:    4 KTIGNAKESGGLYYLDNGLDFKDQQKTSTCFESIFVSSNNDDIMLWHLRLGHPSFPYLKHLFPKLFSKKDPSLFHCETCEFAKHHRSSFSAQPYKQSKPFAVIHSDVWGPNRINTFSNKKWFITFIDDHTRICWVYLLKEKSEVGQVVKNFFKMVHTQYQTNIQVFRSDNGKEYFNILLSDFFLANGVVHQSSCVNTPQQNGIAERKNRHLLEVARALLF 663
            KTIG+A+   GLYY ++ L      +  +   S+FV    D IM+WH +LG PSF YLKHLFP LF K DP  F CE+C  AK  R ++ ++PY  SKPF + HSDVWGP+++ T S KKWF+TFIDDHTR+CWVYL++EKSEV ++ K F+KM+  Q+QT I + RSDNG +YFN +L  F    G++HQSSC +TPQQNGIA+RKN+HLLEVARA++F
Sbjct:  377 KTIGSARMINGLYYFEDNLPSNKIAQGLSSISSLFV---RDQIMVWHCKLGPPSFSYLKHLFPVLFQKVDPLSFQCESCLLAKSQRKTYISKPYYASKPFYLFHSDVWGPSKVTTISGKKWFVTFIDDHTRLCWVYLMREKSEVERIFKEFYKMIENQFQTKISILRSDNGTKYFNKVLETFSNKKGILHQSSCSDTPQQNGIAQRKNKHLLEVARAMMF 593

HSP 2 Score: 45.4394 bits (106), Expect = 1.111e-77
Identity = 23/44 (52.27%), Postives = 32/44 (72.73%), Query Frame = 3

Query:  672 VPKYLWGEAILTASYLINRCHLK-FRFHTPLDVF-ELFPLTSVS 797
            +PKYLWG+AILTASYLINR   K  ++ TPL    ++FP + ++
Sbjct:  597 IPKYLWGDAILTASYLINRMPTKILQYTTPLKCLKKVFPKSRIN 640

[Close]

BLAST of GR403384 vs. TrEMBL
Match: A5CA30_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_025054 PE=4 SV=1)

HSP 1 Score: 274.633 bits (701), Expect = 4.191e-77
Identity = 127/224 (56.70%), Postives = 165/224 (73.66%), Query Frame = 1

Query:    1 GKTIGNAKESGGLYYLDNGLDFKDQQKTSTCFESIFVSSNNDD--IMLWHLRLGHPSFPYLKHLFPKLFSKKDPSLFHCETCEFAKHHRSSFSAQPYKQSKPFAVIHSDVWGPNRINTFSNKKWFITFIDDHTRICWVYLLKEKSEVGQVVKNFFKMVHTQYQTNIQVFRSDNGKEYFNILLSDFFLANGVVHQSSCVNTPQQNGIAERKNRHLLEVARALLFA 666
            GKTIGNA+E  GLY L    D ++Q + +    S  VS  N+D  I LWH RLGHP+  YLKHLFP LF+K +P  F CE C+ +K  RS F  QPYK+S PF++IHSD+WGP+RI   +  +WF++FIDDHTR+ WV+L+KEKSE  Q+ KNF  M+ TQ+Q+ IQ+ +SDN ++YFN +L +F    G+VH SSCV+TPQQNGIAERKNRHLLEVAR+L+F+
Sbjct:  588 GKTIGNAEECSGLYILKERHDPQEQPQMTVGSNSFSVSCQNNDSAIRLWHYRLGHPNVMYLKHLFPSLFNK-NPQSFECEICQLSKQVRSHFPIQPYKESSPFSMIHSDIWGPSRIKNVTGTRWFVSFIDDHTRLTWVFLMKEKSETSQIFKNFKNMIQTQFQSKIQILKSDNARDYFNSILGEFLAQEGIVHLSSCVDTPQQNGIAERKNRHLLEVARSLMFS 810

HSP 2 Score: 39.6614 bits (91), Expect = 4.191e-77
Identity = 20/41 (48.78%), Postives = 27/41 (65.85%), Query Frame = 3

Query:  672 VPKYLWGEAILTASYLINRCHLK-FRFHTPLD-VFELFPLT 788
            VPK  WG+A+LTA+YLINR   +  +F TP   + + FP T
Sbjct:  813 VPKLFWGQAVLTAAYLINRMPXRVLKFQTPCQTLLKSFPTT 853

[Close]

BLAST of GR403384 vs. TrEMBL
Match: A5AYC4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_029672 PE=4 SV=1)

HSP 1 Score: 272.322 bits (695), Expect = 2.690e-76
Identity = 126/224 (56.25%), Postives = 164/224 (73.21%), Query Frame = 1

Query:    1 GKTIGNAKESGGLYYLDNGLDFKDQQKTSTCFESIFVSSNNDD--IMLWHLRLGHPSFPYLKHLFPKLFSKKDPSLFHCETCEFAKHHRSSFSAQPYKQSKPFAVIHSDVWGPNRINTFSNKKWFITFIDDHTRICWVYLLKEKSEVGQVVKNFFKMVHTQYQTNIQVFRSDNGKEYFNILLSDFFLANGVVHQSSCVNTPQQNGIAERKNRHLLEVARALLFA 666
            GKTIGNA+E  GLY L    D ++Q + +    S  VS  N+D  I LWH RLGHP+  YLKHLFP LF+K +P  F CE C+ +K  RS F  QPYK+S PF++IHSD+WGP+RI   +  +WF++FIDDHTR+ WV+L+KEKSE  Q+ KNF  M+ TQ+Q+ IQ+ +SDN ++YFN +L +F    G+VH SSCV+TPQQNGIAERKNRHLLEV R+L+F+
Sbjct:  473 GKTIGNAEECSGLYILKERHDPQEQPQMTVGSNSFSVSCQNNDSAIRLWHYRLGHPNVMYLKHLFPSLFNK-NPKSFECEICQLSKQVRSHFPIQPYKESSPFSMIHSDIWGPSRIKNVTGTRWFVSFIDDHTRLTWVFLMKEKSETSQIFKNFKNMIQTQFQSKIQILKSDNARDYFNSILGEFLAQEGLVHLSSCVDTPQQNGIAERKNRHLLEVVRSLMFS 695

HSP 2 Score: 39.2762 bits (90), Expect = 2.690e-76
Identity = 20/41 (48.78%), Postives = 27/41 (65.85%), Query Frame = 3

Query:  672 VPKYLWGEAILTASYLINRCHLK-FRFHTPLD-VFELFPLT 788
            VPK  WG+A+LTA+YLINR   +  +F TP   + + FP T
Sbjct:  698 VPKLFWGQAVLTAAYLINRMPSRVLKFQTPCQTLLKSFPTT 738

[Close]

BLAST of GR403384 vs. TrEMBL
Match: A5BNN1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_000843 PE=4 SV=1)

HSP 1 Score: 266.929 bits (681), Expect = 3.514e-76
Identity = 122/221 (55.20%), Postives = 159/221 (71.95%), Query Frame = 1

Query:    1 GKTIGNAKESGGLYYLDNGLDFKDQQKTSTCFESIFVSSNNDDIMLWHLRLGHPSFPYLKHLFPKLFSKKDPSLFHCETCEFAKHHRSSFSAQPYKQSKPFAVIHSDVWGPNRINTFSNKKWFITFIDDHTRICWVYLLKEKSEVGQVVKNFFKMVHTQYQTNIQVFRSDNGKEYFNILLSDFFLANGVVHQSSCVNTPQQNGIAERKNRHLLEVARALLF 663
            GKTIG+A+   GLYY ++ L      +  +   S+FV    D IM+WH RLGHPSF YLKHLFP LF K DP  F CE+C  AK  R ++  +PY  SKPF + HSDVWGP+++ T S KKWF+TFI+DHTR+CWVYL++EKS+V ++ K F++M+  Q+QT I + RSDNG EYFN +L  F    G++HQSSC +T +QNGIAE KN+HLLEVARA++F
Sbjct:  309 GKTIGSARMIDGLYYFEDNLPSNKIAQGLSSISSLFV---RDQIMVWHCRLGHPSFSYLKHLFPVLFQKVDPLSFQCESCLLAKSQRKTYIPKPYYASKPFYLFHSDVWGPSKVTTISGKKWFVTFINDHTRLCWVYLMREKSKVERIFKEFYRMIENQFQTKISILRSDNGIEYFNKVLETFSNEKGILHQSSCSDTSEQNGIAECKNKHLLEVARAMMF 526

HSP 2 Score: 44.2838 bits (103), Expect = 3.514e-76
Identity = 22/46 (47.83%), Postives = 34/46 (73.91%), Query Frame = 3

Query:  672 VPKYLWGEAILTASYLINRCHLK-FRFHTPLDVF-ELFPLTSVSAD 803
            +PKYLW +AILTASYLINR   K  ++ TPL+   ++FP + ++++
Sbjct:  530 IPKYLWRDAILTASYLINRMPTKILQYTTPLECLKKVFPESRINSE 575

[Close]

BLAST of GR403384 vs. TrEMBL
Match: A5AWY8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_008680 PE=4 SV=1)

HSP 1 Score: 271.552 bits (693), Expect = 4.581e-76
Identity = 126/224 (56.25%), Postives = 164/224 (73.21%), Query Frame = 1

Query:    1 GKTIGNAKESGGLYYLDNGLDFKDQQKTSTCFESIFVSSNNDD--IMLWHLRLGHPSFPYLKHLFPKLFSKKDPSLFHCETCEFAKHHRSSFSAQPYKQSKPFAVIHSDVWGPNRINTFSNKKWFITFIDDHTRICWVYLLKEKSEVGQVVKNFFKMVHTQYQTNIQVFRSDNGKEYFNILLSDFFLANGVVHQSSCVNTPQQNGIAERKNRHLLEVARALLFA 666
            GKTIGNA+E  GLY L    D ++Q + +    S  VS  N+D  I LWH RLGHP+  YLKHLFP LF+K +P  F CE C+ +K  RS F  QPYK+S PF++IHSD+WGP+RI   +  +WF++FIDDHTR+ WV+L+KEKSE  Q+ KNF  M+ TQ+Q+ IQ+ +SDN ++YFN +L +F    G+VH SSCV+T QQNGIAERKNRHLLEVAR+L+F+
Sbjct:  764 GKTIGNAEECSGLYILKERHDPQEQPQMTVGSNSFSVSCQNNDSAIRLWHYRLGHPNVMYLKHLFPSLFNK-NPKSFECEICQLSKQVRSHFPIQPYKESSPFSMIHSDIWGPSRIKNVTGTRWFVSFIDDHTRLTWVFLMKEKSETSQIFKNFKNMIQTQFQSKIQILKSDNARDYFNSILGEFLAQEGIVHLSSCVDTSQQNGIAERKNRHLLEVARSLMFS 986

HSP 2 Score: 39.2762 bits (90), Expect = 4.581e-76
Identity = 20/41 (48.78%), Postives = 27/41 (65.85%), Query Frame = 3

Query:  672 VPKYLWGEAILTASYLINRCHLK-FRFHTPLD-VFELFPLT 788
            VPK  WG+A+LTA+YLINR   +  +F TP   + + FP T
Sbjct:  989 VPKLFWGQAVLTAAYLINRMPSRVLKFQTPCQTLLKSFPTT 1029

[Close]

BLAST of GR403384 vs. TrEMBL
Match: A5AZT5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_011639 PE=4 SV=1)

HSP 1 Score: 270.396 bits (690), Expect = 1.016e-75
Identity = 125/224 (55.80%), Postives = 164/224 (73.21%), Query Frame = 1

Query:    1 GKTIGNAKESGGLYYLDNGLDFKDQQKTSTCFESIFVSSNNDD--IMLWHLRLGHPSFPYLKHLFPKLFSKKDPSLFHCETCEFAKHHRSSFSAQPYKQSKPFAVIHSDVWGPNRINTFSNKKWFITFIDDHTRICWVYLLKEKSEVGQVVKNFFKMVHTQYQTNIQVFRSDNGKEYFNILLSDFFLANGVVHQSSCVNTPQQNGIAERKNRHLLEVARALLFA 666
            GKTIGNA+E  GLY L    D ++Q + +    S  VS  N+D  IMLWH RLGHP+  YLKHLFP LF+K +P  F CE C+ +K  RS F  QPYK+S PF++IHSD+WGP+RI   +  +W ++FID HTR+ WV+L+KEKSE  Q+ KNF  M+ TQ+Q+ IQ+ +SDN ++YFN ++ +F    G+VH SSCV+TPQQNGIAERKNRHLLEVAR+L+F+
Sbjct:  449 GKTIGNAEECSGLYILKECHDPQEQPQMAVGSNSFSVSCQNNDSAIMLWHYRLGHPNVKYLKHLFPSLFNK-NPKSFECEICQLSKQVRSHFPIQPYKESSPFSMIHSDIWGPSRIKNVTGTRWLVSFIDVHTRLTWVFLMKEKSETSQIFKNFKNMIQTQFQSKIQILKSDNARDYFNSIIGEFLAQEGIVHLSSCVDTPQQNGIAERKNRHLLEVARSLMFS 671

HSP 2 Score: 39.2762 bits (90), Expect = 1.016e-75
Identity = 20/41 (48.78%), Postives = 27/41 (65.85%), Query Frame = 3

Query:  672 VPKYLWGEAILTASYLINRCHLK-FRFHTPLD-VFELFPLT 788
            VPK  WG+A+LTA+YLINR   +  +F TP   + + FP T
Sbjct:  674 VPKLFWGQAVLTAAYLINRMPSRVLKFQTPCQTLLKSFPTT 714

[Close]

BLAST of GR403384 vs. TrEMBL
Match: A5AQS6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_006799 PE=4 SV=1)

HSP 1 Score: 274.633 bits (701), Expect = 1.327e-75
Identity = 127/224 (56.70%), Postives = 165/224 (73.66%), Query Frame = 1

Query:    1 GKTIGNAKESGGLYYLDNGLDFKDQQKTSTCFESIFVSSNNDD--IMLWHLRLGHPSFPYLKHLFPKLFSKKDPSLFHCETCEFAKHHRSSFSAQPYKQSKPFAVIHSDVWGPNRINTFSNKKWFITFIDDHTRICWVYLLKEKSEVGQVVKNFFKMVHTQYQTNIQVFRSDNGKEYFNILLSDFFLANGVVHQSSCVNTPQQNGIAERKNRHLLEVARALLFA 666
            GKTIGNA+E  GLY L    D ++Q + +    S  VS  N+D  I LWH RLGHP+  YLKHLFP LF+K +P  F CE C+ +K  RS F  QPYK+S PF++IHSD+WGP+RI   +  +WF++FIDDHTR+ WV+L+KEKSE  Q+ KNF  M+ TQ+Q+ IQ+ +SDN ++YFN +L +F    G+VH SSCV+TPQQNGIAERKNRHLLEVAR+L+F+
Sbjct:  192 GKTIGNAEECSGLYILKERHDPQEQPQMTVGSNSFSVSCQNNDSAIRLWHYRLGHPNVMYLKHLFPSLFNK-NPQSFECEICQLSKQVRSHFPIQPYKESSPFSMIHSDIWGPSRIKNVTGTRWFVSFIDDHTRLTWVFLMKEKSETSQIFKNFKNMIQTQFQSKIQILKSDNARDYFNSILGEFLAQEGIVHLSSCVDTPQQNGIAERKNRHLLEVARSLMFS 414

HSP 2 Score: 34.6538 bits (78), Expect = 1.327e-75
Identity = 19/41 (46.34%), Postives = 26/41 (63.41%), Query Frame = 3

Query:  672 VPKYLWGEAILTASYLINRCHLK-FRFHTPLD-VFELFPLT 788
            VPK   G+A+LTA+YLINR   +  +F TP   + + FP T
Sbjct:  417 VPKLFXGQAVLTAAYLINRMPSRVLKFQTPCQTLLKSFPTT 457

[Close]

BLAST of GR403384 vs. TAIR peptide
Match: ATMG00300.1 (| Symbols: ORF145A | Gag-Pol-related retrotransposon family protein | chrM:89617-90054 REVERSE LENGTH=145)

HSP 1 Score: 56.6102 bits (135), Expect = 1.996e-8
Identity = 31/80 (38.75%), Postives = 40/80 (50.00%), Query Frame = 1

Query:   97 ESIFVSSNNDDIMLWHLRLGHPSFPYLKHLFPKLF--SKKDPSLFHCETCEFAKHHRSSFSAQPYKQSKPFAVIHSDVWG 330
            ES    +  D+  LWH RL H S   ++ L  K F  S K  SL  CE C + K HR +FS   +    P   +HSD+WG
Sbjct:   58 ESNLAETAKDETRLWHSRLAHMSQRGMELLVKKGFLDSSKVSSLKFCEDCIYGKTHRVNFSTGQHTTKNPLDYVHSDLWG 137

The following BLAST results are available for this feature:

BLAST of GR403384 vs. SwissProt
BLAST of GR403384 vs. TrEMBL
BLAST of GR403384 vs. TAIR peptide

BLAST of GR403384 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
POLX_TOBAC	1.750e-32	34.90	Retrovirus-related Pol polyprotein from transposon...	[more]
COPIA_DROME	3.289e-23	31.50	Copia protein OS=Drosophila melanogaster GN=GIP PE...	[more]
YO22B_YEAST	9.072e-16	29.27	Transposon Ty2-OR2 Gag-Pol polyprotein OS=Saccharo...	[more]
YO21B_YEAST	9.072e-16	29.27	Transposon Ty2-OR1 Gag-Pol polyprotein OS=Saccharo...	[more]
YL22B_YEAST	9.072e-16	29.27	Transposon Ty2-LR2 Gag-Pol polyprotein OS=Saccharo...	[more]
YL21B_YEAST	9.072e-16	29.27	Transposon Ty2-LR1 Gag-Pol polyprotein OS=Saccharo...	[more]
YG21B_YEAST	9.072e-16	29.27	Transposon Ty2-GR1 Gag-Pol polyprotein OS=Saccharo...	[more]
YF21B_YEAST	9.072e-16	29.27	Transposon Ty2-F/Ty2-GR2 Gag-Pol polyprotein OS=Sa...	[more]
YD23B_YEAST	9.072e-16	29.27	Transposon Ty2-DR3 Gag-Pol polyprotein OS=Saccharo...	[more]
YD22B_YEAST	9.072e-16	29.27	Transposon Ty2-DR2 Gag-Pol polyprotein OS=Saccharo...	[more]

BLAST of GR403384 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
A5AYJ3_VITVI	2.429e-95	69.64	Putative uncharacterized protein OS=Vitis vinifera...	[more]
Q04358_SOLTU	1.455e-80	60.35	Potato DNA for copia-like transposable element OS=...	[more]
A5C6A5_VITVI	3.838e-78	59.19	Putative uncharacterized protein OS=Vitis vinifera...	[more]
A5B9Y8_VITVI	1.111e-77	55.91	Putative uncharacterized protein OS=Vitis vinifera...	[more]
A5CA30_VITVI	4.191e-77	56.70	Putative uncharacterized protein OS=Vitis vinifera...	[more]
A5AYC4_VITVI	2.690e-76	56.25	Putative uncharacterized protein OS=Vitis vinifera...	[more]
A5BNN1_VITVI	3.514e-76	55.20	Putative uncharacterized protein OS=Vitis vinifera...	[more]
A5AWY8_VITVI	4.581e-76	56.25	Putative uncharacterized protein OS=Vitis vinifera...	[more]
A5AZT5_VITVI	1.016e-75	55.80	Putative uncharacterized protein OS=Vitis vinifera...	[more]
A5AQS6_VITVI	1.327e-75	56.70	Putative uncharacterized protein OS=Vitis vinifera...	[more]

BLAST of GR403384 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 1


Match Name	E-value	Identity	Description
ATMG00300.1	1.996e-8	38.75	\| Symbols: ORF145A \| Gag-Pol-related retrotranspos...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001584	Integrase, catalytic core	PFAM	PF00665	rve	coord: 97..214 score: 7.4
IPR001584	Integrase, catalytic core	PROFILE	PS50994	INTEGRASE	coord: 96..234 score: 15
IPR012337	Ribonuclease H-like	SUPERFAMILY	53098	Ribonuclease H-like	coord: 93..224 score: 1.1
None	No IPR available	GENE3D	3.30.420.10	no description	coord: 93..224 score: 5.4
None	No IPR available	PANTHER	PTHR11439	GAG-POL-RELATED RETROTRANSPOSON	coord: 3..221 score: 1.8
None	No IPR available	SEG	seg	seg	coord: 34..44 score

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>GR403384 ID=GR403384; Name=GR403384; organism=Cicer arietinum; type=EST; length=838bp
GGGAAGACGATTGGCAATGCTAAGGAGAGTGGAGGACTCTATTATCTTGA
CAATGGGCTCGACTTCAAAGACCAACAAAAAACAAGTACCTGCTTTGAAT
CTATTTTTGTTTCTTCTAATAATGATGATATTATGTTATGGCATTTACGG
TTAGGACATCCTAGTTTTCCGTATTTGAAACATTTGTTTCCTAAATTATT
TTCTAAGAAGGATCCATCTTTATTTCATTGTGAAACTTGTGAATTTGCTA
AACATCACCGTTCTTCTTTTTCTGCACAACCATATAAACAATCAAAACCG
TTTGCAGTTATTCATAGTGATGTTTGGGGTCCTAATAGAATAAACACATT
TTCTAATAAAAAATGGTTTATAACTTTTATTGATGATCATACTAGAATTT
GTTGGGTTTATTTATTGAAAGAAAAATCGGAAGTTGGACAGGTTGTCAAA
AATTTCTTTAAAATGGTGCACACTCAATACCAAACAAATATTCAAGTCTT
CAGAAGTGACAATGGTAAAGAATATTTTAATATACTTTTGTCCGATTTTT
TTCTTGCAAATGGGGTTGTTCATCAAAGTTCTTGTGTTAATACACCCCAA
CAAAATGGAATTGCAGAGAGAAAGAATAGGCATCTCCTTGAGGTTGCTAG
AGCTTTACTATTTGCAAATAAGTTCCAAAATATTTGTGGGGTGAAGCTAT
TTTAACTGCATCATATTTAATCAATCGATGCCATCTAAAGTTTAGATTTC
ATACACCTCTTGATGTTTTCGAATTATTTCCATTGACTAGTGTCTCTGCT
GATTGCCACTAAAGTTTTGGTGCACTGCTTTGTCATGA

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding
GO:0003676	nucleic acid binding

Vocabulary: **Biological Process**
Term	Definition
GO:0015074	DNA integration

Vocabulary: **INTERPRO**
Term	Definition
IPR001584	Integrase_cat-core
IPR012337	RNaseH-like_sf

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