GR405148

EST Overview


Name	GR405148
Unique Name	GR405148
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	521

Libraries


Library Name	Type
LIBEST_024785 ICCV2 Salinity-stressed chickpea root cDNA library	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

[Close]

BLAST of GR405148 vs. SwissProt
Match: SDIR1_ARATH (E3 ubiquitin-protein ligase SDIR1 OS=Arabidopsis thaliana GN=SDIR1 PE=1 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 1.812e-31
Identity = 68/123 (55.28%), Postives = 82/123 (66.67%), Query Frame = -1

Query:  138 STPSMTEEEINALPIHKYKVPGPAIDGSTGLASSFSEAAEIKQDLKGTEGSVRGPEDELTCTVCLDHVKRAELVRSLPCLHQFHANCIDQWLRQQGTCPVCKFRMQLVRQGNRERGSDGSNIV 506
            ST SM+EEEINALP+HKYKV  P  +    LA   S ++  ++ L     S +G EDELTC+VCL+ V   E+VR+LPCLHQFHA CID WLRQQGTCPVCKFR     Q   E   D S++V
Sbjct:  153 STTSMSEEEINALPVHKYKVLDP--ENGCSLAKQASTSSSAEKMLDSANESKKGTEDELTCSVCLEQVTVGEIVRTLPCLHQFHAGCIDPWLRQQGTCPVCKFRAHSGWQEQDEIDDDASDMV 273

[Close]

BLAST of GR405148 vs. SwissProt
Match: RNF12_MOUSE (E3 ubiquitin-protein ligase RLIM OS=Mus musculus GN=Rlim PE=1 SV=2)

HSP 1 Score: 64.3142 bits (155), Expect = 3.927e-10
Identity = 27/62 (43.55%), Postives = 38/62 (61.29%), Query Frame = -1

Query:  165 GPEDEL-TCTVCLDHVKRAELVRSLPCLHQFHANCIDQWLRQQGTCPVCKFRMQLVRQGNRE 347
            G  D L TC+VC+        +R LPC H++H +CID+WL +  TCP+C  R  ++  GNRE
Sbjct:  538 GENDALKTCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPIC--RRAVLSSGNRE 597

[Close]

BLAST of GR405148 vs. SwissProt
Match: RNF12_HUMAN (E3 ubiquitin-protein ligase RLIM OS=Homo sapiens GN=RLIM PE=1 SV=3)

HSP 1 Score: 64.3142 bits (155), Expect = 3.927e-10
Identity = 27/62 (43.55%), Postives = 38/62 (61.29%), Query Frame = -1

Query:  165 GPEDEL-TCTVCLDHVKRAELVRSLPCLHQFHANCIDQWLRQQGTCPVCKFRMQLVRQGNRE 347
            G  D L TC+VC+        +R LPC H++H +CID+WL +  TCP+C  R  ++  GNRE
Sbjct:  562 GENDALKTCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPIC--RRAVLASGNRE 621

[Close]

BLAST of GR405148 vs. SwissProt
Match: RN215_MOUSE (RING finger protein 215 OS=Mus musculus GN=Rnf215 PE=2 SV=1)

HSP 1 Score: 64.3142 bits (155), Expect = 3.927e-10
Identity = 24/46 (52.17%), Postives = 32/46 (69.57%), Query Frame = -1

Query:  192 TCTVCLDHVKRAELVRSLPCLHQFHANCIDQWLRQQGTCPVCKFRM 329
            TC VCLD+    + +R LPC H+FH +C+D WL  Q TCP+CKF +
Sbjct:  326 TCAVCLDYFCNKQWLRVLPCKHEFHRDCVDPWLMLQQTCPLCKFNV 371

[Close]

BLAST of GR405148 vs. SwissProt
Match: RN215_HUMAN (RING finger protein 215 OS=Homo sapiens GN=RNF215 PE=1 SV=2)

HSP 1 Score: 64.3142 bits (155), Expect = 3.927e-10
Identity = 24/46 (52.17%), Postives = 32/46 (69.57%), Query Frame = -1

Query:  192 TCTVCLDHVKRAELVRSLPCLHQFHANCIDQWLRQQGTCPVCKFRM 329
            TC VCLD+    + +R LPC H+FH +C+D WL  Q TCP+CKF +
Sbjct:  324 TCAVCLDYFCNKQWLRVLPCKHEFHRDCVDPWLMLQQTCPLCKFNV 369

[Close]

BLAST of GR405148 vs. SwissProt
Match: ATL42_ARATH (E3 ubiquitin-protein ligase ATL42 OS=Arabidopsis thaliana GN=ATL42 PE=1 SV=2)

HSP 1 Score: 64.3142 bits (155), Expect = 3.927e-10
Identity = 26/58 (44.83%), Postives = 38/58 (65.52%), Query Frame = -1

Query:  186 SVRGPEDELTCTVCLDHVKRAELVRSLP-CLHQFHANCIDQWLRQQGTCPVCKFRMQL 356
            +++G +  L C+VCL   +  E++R LP C H FH  CIDQWL Q  TCP+C+ R+ +
Sbjct:  113 ALKGSKQGLDCSVCLSKFESVEILRLLPKCRHAFHIGCIDQWLEQHATCPLCRDRVSM 170

[Close]

BLAST of GR405148 vs. SwissProt
Match: RNF12_XENTR (E3 ubiquitin-protein ligase RNF12 OS=Xenopus tropicalis GN=rnf12 PE=2 SV=1)

HSP 1 Score: 63.1586 bits (152), Expect = 8.749e-10
Identity = 27/62 (43.55%), Postives = 38/62 (61.29%), Query Frame = -1

Query:  165 GPEDEL-TCTVCLDHVKRAELVRSLPCLHQFHANCIDQWLRQQGTCPVCKFRMQLVRQGNRE 347
            G  D L TC+VC+        +R LPC H++H +CID+WL +  TCP+C  R  ++  GNRE
Sbjct:  577 GENDALKTCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPIC--RRAVLVAGNRE 636

[Close]

BLAST of GR405148 vs. SwissProt
Match: ATL12_ARATH (Putative RING-H2 finger protein ATL12 OS=Arabidopsis thaliana GN=ATL12 PE=2 SV=1)

HSP 1 Score: 63.1586 bits (152), Expect = 8.749e-10
Identity = 26/58 (44.83%), Postives = 38/58 (65.52%), Query Frame = -1

Query:  186 SVRGPEDELTCTVCLDHVKRAELVRSLP-CLHQFHANCIDQWLRQQGTCPVCKFRMQL 356
            +++G +  L C+VCL   +  E++R LP C H FH  CIDQWL Q  TCP+C+ R+ +
Sbjct:  114 ALKGLKQGLECSVCLSKFEDVEILRLLPKCRHAFHIGCIDQWLEQHATCPLCRNRVNI 171

[Close]

BLAST of GR405148 vs. SwissProt
Match: RING2_ARATH (E3 ubiquitin-protein ligase At1g63170 OS=Arabidopsis thaliana GN=At1g63170 PE=2 SV=2)

HSP 1 Score: 62.7734 bits (151), Expect = 1.143e-9
Identity = 31/115 (26.96%), Postives = 57/115 (49.57%), Query Frame = -1

Query:  153 TEEEINALPIHKYKVPGPAIDGSTGLASSFSEAAEIKQDLKGTEGSVRG--PEDELTCTVCLDHVKRAELVRSLPCLHQFHANCIDQWLRQQGTCPVCKFRMQLVRQGNRERGSD 491
            ++E+I+ L   K++  G  +  +        ++  +  +  GT+  V    P ++  C +CL   +    +R LPC H FH  C+D+WL    TCP+CK+   +++  N E G +
Sbjct:  269 SKEDIDQLTKFKFRKVGDTMKHTVDEEQGQGDSGGVMTEC-GTDSPVEHALPHEDAECCICLSAYEDETELRELPCGHHFHCGCVDKWLYINATCPLCKY--NILKSSNYEEGEE 380

[Close]

BLAST of GR405148 vs. SwissProt
Match: RF12B_XENLA (E3 ubiquitin-protein ligase RNF12-B OS=Xenopus laevis GN=rnf12-b PE=2 SV=1)

HSP 1 Score: 62.7734 bits (151), Expect = 1.143e-9
Identity = 27/62 (43.55%), Postives = 38/62 (61.29%), Query Frame = -1

Query:  165 GPEDEL-TCTVCLDHVKRAELVRSLPCLHQFHANCIDQWLRQQGTCPVCKFRMQLVRQGNRE 347
            G  D L TC+VC+        +R LPC H++H +CID+WL +  TCP+C  R  ++  GNRE
Sbjct:  695 GENDALKTCSVCITEYTEGNKLRKLPCSHEYHIHCIDRWLSENSTCPIC--RRAVLVAGNRE 754

[Close]

BLAST of GR405148 vs. TrEMBL
Match: C6TJK6_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 1.231e-47
Identity = 98/127 (77.17%), Postives = 102/127 (80.31%), Query Frame = -1

Query:  141 SDTASSTPSMTEEEINALPIHKYKVPGPAIDGSTGLASSFSEAAEIKQDLKGTEGSVRGPEDELTCTVCLDHVKRAELVRSLPCLHQFHANCIDQWLRQQGTCPVCKFRMQLVRQGNRERGSDGSNI 521
            SDTASST SMTEEEINALPIH YKVP P  DGS GLASS S AAEIKQ   GTE   +G EDELTCT+CLD VKR ELVRSLPCLHQFHANCID WLRQQGTCPVCK R+  V  GNRE  SDGS+I
Sbjct:  148 SDTASSTRSMTEEEINALPIHTYKVPVPPKDGSAGLASS-SGAAEIKQASGGTEAGAKGSEDELTCTICLDQVKRGELVRSLPCLHQFHANCIDPWLRQQGTCPVCKLRIGSVSGGNRESESDGSDI 273

[Close]

BLAST of GR405148 vs. TrEMBL
Match: B9HPE3_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_833261 PE=4 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 5.184e-38
Identity = 82/126 (65.08%), Postives = 95/126 (75.40%), Query Frame = -1

Query:  138 SSTPSMTEEEINALPIHKYKVPGPAIDGSTGL--ASSFSEAAEIKQDLKGTEGSVRGPEDELTCTVCLDHVKRAELVRSLPCLHQFHANCIDQWLRQQGTCPVCKFRMQLVRQGNRERGSDGSNIV 509
            +ST SMTEEEINALP+HKYKVP    +GS  L  ASS S  AE KQD K  +G+++  EDELTCT+CL+ V R ELVRSLPCLHQFH NCID WLRQQGTCPVCKF +    Q +RE  SDGS++V
Sbjct:  151 ASTTSMTEEEINALPVHKYKVPVQE-NGSASLQHASSSSAPAETKQDSKNADGNMKTSEDELTCTICLEQVNRGELVRSLPCLHQFHTNCIDPWLRQQGTCPVCKFLIGSGWQESRESESDGSDMV 275

[Close]

BLAST of GR405148 vs. TrEMBL
Match: D7TLR3_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_19.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00016511001 PE=4 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 5.732e-37
Identity = 76/128 (59.38%), Postives = 90/128 (70.31%), Query Frame = -1

Query:  138 SDTASSTPSMTEEEINALPIHKYKVPGPAIDGSTGLASSFSEAAEIKQDLKGTEGSVRGPEDELTCTVCLDHVKRAELVRSLPCLHQFHANCIDQWLRQQGTCPVCKFRMQLVRQGNRERGSDGSNIV 521
            S+   +TPSM+EEEINALP+HKYKV G    GS+    S S +AE KQD+     S + P+DELTC+VCL+ V   EL+RSLPCLHQFHANCID WLRQQGTCPVCKFR     Q N + G D S +V
Sbjct:  148 SENVPTTPSMSEEEINALPVHKYKVAGTQGGGSSMQQGSSSASAEKKQDINNAVASTKAPDDELTCSVCLEQVNVGELIRSLPCLHQFHANCIDPWLRQQGTCPVCKFRAAPGWQENGQGGMDASYMV 275

[Close]

BLAST of GR405148 vs. TrEMBL
Match: D7SKC3_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_4.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00024921001 PE=4 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 1.081e-35
Identity = 79/133 (59.40%), Postives = 98/133 (73.68%), Query Frame = -1

Query:  138 SDTASSTPSMTEEEINALPIHKYKVPGPAIDGST-GLASSFSEAAEI----KQDLKGTEGSVRGPEDELTCTVCLDHVKRAELVRSLPCLHQFHANCIDQWLRQQGTCPVCKFRMQLVRQGNRERGSDGSNIV 521
            SD  SST S++EEEINALP+HKYKV GP  +GS+   A+S S +AE     +QD +  + S++G EDELTC++CL+ V R ELVRSLPCLHQFHANCID WLRQQGTCPVCKFR+    Q +RE   D + +V
Sbjct:  148 SDNTSST-SLSEEEINALPVHKYKVTGPQSEGSSMQQAASSSASAEFDEKARQDSRKGDSSMKGSEDELTCSICLEQVNRGELVRSLPCLHQFHANCIDPWLRQQGTCPVCKFRVGAGWQESRESEIDDAEMV 279

[Close]

BLAST of GR405148 vs. TrEMBL
Match: C6TKE4_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 1.844e-35
Identity = 70/109 (64.22%), Postives = 83/109 (76.15%), Query Frame = -1

Query:  195 SDTASSTPSMTEEEINALPIHKYKVPGPAIDGSTGLASSFSEAAEIKQDLKGTEGSVRGPEDELTCTVCLDHVKRAELVRSLPCLHQFHANCIDQWLRQQGTCPVCKFR 521
            SD  S+ PSMTEEEINALP+HKYKV GP   GS+   +S S  AE KQD     GS++  +D+LTC+VCL+ V   +++RSLPCLHQFHANCID WLRQQGTCPVCKFR
Sbjct:  148 SDNVSTAPSMTEEEINALPVHKYKVSGPQCGGSSMQQASSSTPAEKKQDNSNAVGSMKASDDDLTCSVCLEQVNVGDVLRSLPCLHQFHANCIDPWLRQQGTCPVCKFR 256

[Close]

BLAST of GR405148 vs. TrEMBL
Match: B9S3H0_RICCO (Protein binding protein, putative OS=Ricinus communis GN=RCOM_0734870 PE=4 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 2.408e-35
Identity = 76/128 (59.38%), Postives = 93/128 (72.66%), Query Frame = -1

Query:  141 SDTASSTPSMTEEEINALPIHKYKVP-GPAIDGSTGLASSFSEAAEIKQDLKGTEGSVRGPEDELTCTVCLDHVKRAELVRSLPCLHQFHANCIDQWLRQQGTCPVCKFRMQLVRQGNRERGSDGSNI 521
            SD AS+  SM+EEEINALP+HKYKVP       S   ASS S   E+ QD + +EG+V+  EDELTC++CL+ V + E+VRSLPCLHQFH NCID WLRQQGTCPVCKFR+    Q + E  SDGS++
Sbjct:  144 SDNASAAHSMSEEEINALPVHKYKVPRSENACTSQQQASSSSAPTEMTQDSRKSEGTVKALEDELTCSICLEQVNKGEIVRSLPCLHQFHTNCIDPWLRQQGTCPVCKFRIGSGWQESAESISDGSDM 271

[Close]

BLAST of GR405148 vs. TrEMBL
Match: A5BC54_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_022309 PE=4 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 3.145e-35
Identity = 78/132 (59.09%), Postives = 97/132 (73.48%), Query Frame = -1

Query:  141 SDTASSTPSMTEEEINALPIHKYKVPGPAIDGST-GLASSFSEAAEI----KQDLKGTEGSVRGPEDELTCTVCLDHVKRAELVRSLPCLHQFHANCIDQWLRQQGTCPVCKFRMQLVRQGNRERGSDGSNI 521
            SD  SST S++EEEINALP+HKYKV GP  +GS+   A+S S +AE     +QD +  + S++G EDELTC++CL+ V R ELVRSLPCLHQFHANCID WLRQQGTCPVCKFR+    Q +RE   D + +
Sbjct:  803 SDNTSST-SLSEEEINALPVHKYKVTGPQSEGSSMQQAASSSASAEFDEKARQDSRKGDSSMKGSEDELTCSICLEQVNRGELVRSLPCLHQFHANCIDPWLRQQGTCPVCKFRVGAGWQESRESEIDDAEM 933

[Close]

BLAST of GR405148 vs. TrEMBL
Match: C6TGC2_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 1.195e-34
Identity = 70/109 (64.22%), Postives = 82/109 (75.23%), Query Frame = -1

Query:  195 SDTASSTPSMTEEEINALPIHKYKVPGPAIDGSTGLASSFSEAAEIKQDLKGTEGSVRGPEDELTCTVCLDHVKRAELVRSLPCLHQFHANCIDQWLRQQGTCPVCKFR 521
            SD  S+ PSMTEEEINALP+HKYKV GP    S+   +S S  AE KQD     GS++  +DELTC+VCL+ V   +++RSLPCLHQFHANCID WLRQQGTCPVCKFR
Sbjct:  148 SDNVSTAPSMTEEEINALPVHKYKVSGPQSGSSSMQQTSSSTPAEKKQDNSTAVGSMKASDDELTCSVCLEQVDVGDVLRSLPCLHQFHANCIDPWLRQQGTCPVCKFR 256

[Close]

BLAST of GR405148 vs. TrEMBL
Match: B9HTG7_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_724669 PE=4 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 6.558e-33
Identity = 72/128 (56.25%), Postives = 88/128 (68.75%), Query Frame = -1

Query:  138 DTASSTPSMTEEEINALPIHKYKVPGPAIDGSTGLASSFSEAAEIK-QDLKGTEGSVRGPEDELTCTVCLDHVKRAELVRSLPCLHQFHANCIDQWLRQQGTCPVCKFRMQLVRQGNRERGSDGSNIV 518
            D   +  SM+EEEINALP+HKYKV GP   GS+   +S S +AE K QD     GS++  +DELTC+VCL+ V   E++R+LPCLHQFHANCID WLRQQGTCPVCKFR       N + G D S +V
Sbjct:  149 DNVPNGTSMSEEEINALPVHKYKVTGPQNGGSSMQQASSSVSAEQKKQDTGNAIGSMKSSDDELTCSVCLEQVSMGEVIRTLPCLHQFHANCIDPWLRQQGTCPVCKFRAGSGWNENGQGGLDASYMV 276

[Close]

BLAST of GR405148 vs. TrEMBL
Match: B9T008_RICCO (Protein binding protein, putative OS=Ricinus communis GN=RCOM_0040610 PE=4 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.119e-32
Identity = 72/129 (55.81%), Postives = 88/129 (68.22%), Query Frame = -1

Query:  138 SDTASSTPSMTEEEINALPIHKYKVPGPAIDGSTGLASSFSEAAEIK-QDLKGTEGSVRGPEDELTCTVCLDHVKRAELVRSLPCLHQFHANCIDQWLRQQGTCPVCKFRMQLVRQGNRERGSDGSNIV 521
            SD   +T SM++EEINALP+HKYK+      GS+   +S S +AE K QD     GS++  EDELTC+VCL+ V   EL+R+LPCLHQFHANCID WLRQQGTCPVCKFR       N + G D S +V
Sbjct:  148 SDNVPTTASMSDEEINALPVHKYKLTALQTGGSSMQQASSSVSAEPKKQDTANAVGSMKASEDELTCSVCLEQVNVGELIRTLPCLHQFHANCIDPWLRQQGTCPVCKFRAASGWHENGQGGLDASYMV 276

[Close]

BLAST of GR405148 vs. TAIR peptide
Match: AT3G55530.1 (| Symbols: SDIR1 | RING/U-box superfamily protein | chr3:20595300-20597188 REVERSE LENGTH=273)

HSP 1 Score: 135.191 bits (339), Expect = 2.001e-32
Identity = 68/123 (55.28%), Postives = 82/123 (66.67%), Query Frame = -1

Query:  138 STPSMTEEEINALPIHKYKVPGPAIDGSTGLASSFSEAAEIKQDLKGTEGSVRGPEDELTCTVCLDHVKRAELVRSLPCLHQFHANCIDQWLRQQGTCPVCKFRMQLVRQGNRERGSDGSNIV 506
            ST SM+EEEINALP+HKYKV  P  +    LA   S ++  ++ L     S +G EDELTC+VCL+ V   E+VR+LPCLHQFHA CID WLRQQGTCPVCKFR     Q   E   D S++V
Sbjct:  153 STTSMSEEEINALPVHKYKVLDP--ENGCSLAKQASTSSSAEKMLDSANESKKGTEDELTCSVCLEQVTVGEIVRTLPCLHQFHAGCIDPWLRQQGTCPVCKFRAHSGWQEQDEIDDDASDMV 273

[Close]

BLAST of GR405148 vs. TAIR peptide
Match: AT4G32600.1 (| Symbols: | RING/U-box superfamily protein | chr4:15724010-15725737 FORWARD LENGTH=453)

HSP 1 Score: 72.0182 bits (175), Expect = 2.080e-13
Identity = 42/121 (34.71%), Postives = 57/121 (47.11%), Query Frame = -1

Query:  144 TEEEINALPIHKYKVPGPAIDGSTGLASSFSEAAEIKQDLKGTEGSVRGPEDELTCTVCLDHVKRAELVRSLPCLHQFHANCIDQWLRQQGTCPVCKFRM-----QLVRQGNRERGSDGSN 491
            T E INALP HK+K+     +G     SS SE   +     GT+       ++  C +CL      E +R LPC H FH  C+D+WL+   +CP+CK  +      L  QG     S G N
Sbjct:  312 TPESINALPTHKFKLKKSRSNGDDN-GSSTSEGGVVAA---GTDNERAISGEDAVCCICLAKYANNEELRELPCSHFFHKECVDKWLKINASCPLCKSEVGEKNSDLTSQGILTSLSSGEN 428

[Close]

BLAST of GR405148 vs. TAIR peptide
Match: AT1G80400.1 (| Symbols: | RING/U-box superfamily protein | chr1:30225864-30227360 FORWARD LENGTH=407)

HSP 1 Score: 70.4774 bits (171), Expect = 6.053e-13
Identity = 37/103 (35.92%), Postives = 53/103 (51.46%), Query Frame = -1

Query:  201 SSTPSMTEEEINALPIHKYKVPGPAIDGSTGLASSFSEAAEIKQDLKGTEGSVRGPEDELTCTVCLDHVKRAELVRSLPCLHQFHANCIDQWLRQQGTCPVCK 509
            S T   T E INALP++++K         +     FSE  E    L G++       ++ +C +CL      E VR LPC H FH +C+D+WL+   TCP+CK
Sbjct:  301 SQTRGATAEAINALPVYRFK-------SKSRNDLEFSEEGEGGFLLLGSQKKRLISGEDASCCICLTRYGDDEQVRELPCSHVFHVDCVDKWLKINATCPLCK 396

[Close]

BLAST of GR405148 vs. TAIR peptide
Match: AT1G26800.1 (| Symbols: | RING/U-box superfamily protein | chr1:9285576-9286190 REVERSE LENGTH=204)

HSP 1 Score: 66.6254 bits (161), Expect = 8.740e-12
Identity = 29/76 (38.16%), Postives = 47/76 (61.84%), Query Frame = -1

Query:  102 CTVCLDHVKRAELVRSLPCLHQFHANCIDQWLRQQGTCPVCKFRMQLVRQGNRERGSDGSNI-V*Y*FIYGCKVRD 326
            C +CL+  K  E V+ +PC H+FH  CI++WL   G+CPVC++ M +      ++ +DG+ I V + F  G ++RD
Sbjct:  113 CVICLEEWKSEETVKEMPCKHRFHGGCIEKWLGFHGSCPVCRYEMPVDGDEIGKKRNDGNEIWVRFSFNDGRRIRD 188

[Close]

BLAST of GR405148 vs. TAIR peptide
Match: AT5G55970.2 (| Symbols: | RING/U-box superfamily protein | chr5:22668019-22669312 FORWARD LENGTH=343)

HSP 1 Score: 66.2402 bits (160), Expect = 1.142e-11
Identity = 39/103 (37.86%), Postives = 56/103 (54.37%), Query Frame = -1

Query:  201 SSTPSMTEEEINALPIHKYKVPGPAIDGSTGLASSFSEAAEIKQDLKGTEGSVRGPEDELTCTVCLDHVKRAELVRSLPCLHQFHANCIDQWLRQQGTCPVCK 509
            SS  + ++++I++LP  K+K     ID S   + S S++A +  D          PE    C +CL   K  E VR LPC H+FH+ C+DQWLR    CP+CK
Sbjct:  256 SSDRAASDDQISSLPSWKFK----RIDDSA--SDSDSDSATVTDD----------PE----CCICLAKYKDKEEVRKLPCSHKFHSKCVDQWLRIISCCPLCK 338

[Close]

BLAST of GR405148 vs. TAIR peptide
Match: AT5G55970.1 (| Symbols: | RING/U-box superfamily protein | chr5:22668019-22669312 FORWARD LENGTH=343)

HSP 1 Score: 66.2402 bits (160), Expect = 1.142e-11
Identity = 39/103 (37.86%), Postives = 56/103 (54.37%), Query Frame = -1

Query:  201 SSTPSMTEEEINALPIHKYKVPGPAIDGSTGLASSFSEAAEIKQDLKGTEGSVRGPEDELTCTVCLDHVKRAELVRSLPCLHQFHANCIDQWLRQQGTCPVCK 509
            SS  + ++++I++LP  K+K     ID S   + S S++A +  D          PE    C +CL   K  E VR LPC H+FH+ C+DQWLR    CP+CK
Sbjct:  256 SSDRAASDDQISSLPSWKFK----RIDDSA--SDSDSDSATVTDD----------PE----CCICLAKYKDKEEVRKLPCSHKFHSKCVDQWLRIISCCPLCK 338

[Close]

BLAST of GR405148 vs. TAIR peptide
Match: AT3G58720.2 (| Symbols: | RING/U-box superfamily protein | chr3:21716920-21717908 REVERSE LENGTH=266)

HSP 1 Score: 64.6994 bits (156), Expect = 3.321e-11
Identity = 42/131 (32.06%), Postives = 64/131 (48.85%), Query Frame = -1

Query:  141 DTASSTPSMTEEEINALPIHKYKVPGPAIDGSTGLASSFSEAAEIKQDLKGTEGS-----VRGPEDELTCTVCLDHVKRAELVRSLPCLHQFHANCIDQWLRQQGTCPVCKFRMQLVRQGNRERGSDGSNI 518
            +++S + S T EE   L  H  K     +  ST L S    +   +    G+E S     + G ED+  C+VCL+  +  E V   PC H FH  CI  WL+ +G CPVC+F +    + +    ++GSN+
Sbjct:  107 ESSSRSSSQTNEEDEILK-HLTKETYNPVPKSTLLRSL---SLYYRNKNPGSESSRNTQNLSGEEDDKRCSVCLEDFEPKETVMLTPCKHMFHEECIVPWLKTKGQCPVCRFVILKPTKQDSSPPANGSNL 233

[Close]

BLAST of GR405148 vs. TAIR peptide
Match: AT3G58720.1 (| Symbols: | RING/U-box superfamily protein | chr3:21716920-21717892 REVERSE LENGTH=238)

HSP 1 Score: 64.6994 bits (156), Expect = 3.321e-11
Identity = 42/131 (32.06%), Postives = 64/131 (48.85%), Query Frame = -1

Query:  141 DTASSTPSMTEEEINALPIHKYKVPGPAIDGSTGLASSFSEAAEIKQDLKGTEGS-----VRGPEDELTCTVCLDHVKRAELVRSLPCLHQFHANCIDQWLRQQGTCPVCKFRMQLVRQGNRERGSDGSNI 518
            +++S + S T EE   L  H  K     +  ST L S    +   +    G+E S     + G ED+  C+VCL+  +  E V   PC H FH  CI  WL+ +G CPVC+F +    + +    ++GSN+
Sbjct:   79 ESSSRSSSQTNEEDEILK-HLTKETYNPVPKSTLLRSL---SLYYRNKNPGSESSRNTQNLSGEEDDKRCSVCLEDFEPKETVMLTPCKHMFHEECIVPWLKTKGQCPVCRFVILKPTKQDSSPPANGSNL 205

[Close]

BLAST of GR405148 vs. TAIR peptide
Match: AT4G26580.2 (| Symbols: | RING/U-box superfamily protein | chr4:13411705-13412889 REVERSE LENGTH=335)

HSP 1 Score: 64.3142 bits (155), Expect = 4.338e-11
Identity = 36/106 (33.96%), Postives = 51/106 (48.11%), Query Frame = -1

Query:  201 DTASSTPSMTEEEINALPIHKYKVPGPAIDGSTGLASSFSEAAEIKQDLKGTEGSVRGPEDELTCTVCLDHVKRAELVRSLPCLHQFHANCIDQWLRQQGTCPVCK 518
            +  SS    ++++I++LP  KYK           L    S++++   D          PE    C +CL   K  E VR LPC H+FH  C+DQWLR    CP+CK
Sbjct:  250 NVGSSEKGASDDQISSLPSWKYK-----------LIDETSDSSQANND----------PE----CCICLAKYKEKEEVRKLPCSHRFHLKCVDQWLRIISCCPLCK 330

[Close]

BLAST of GR405148 vs. TAIR peptide
Match: AT4G28890.1 (| Symbols: | RING/U-box superfamily protein | chr4:14256437-14257735 REVERSE LENGTH=432)

HSP 1 Score: 64.3142 bits (155), Expect = 4.338e-11
Identity = 26/58 (44.83%), Postives = 38/58 (65.52%), Query Frame = -1

Query:  186 SVRGPEDELTCTVCLDHVKRAELVRSLP-CLHQFHANCIDQWLRQQGTCPVCKFRMQL 356
            +++G +  L C+VCL   +  E++R LP C H FH  CIDQWL Q  TCP+C+ R+ +
Sbjct:  113 ALKGSKQGLDCSVCLSKFESVEILRLLPKCRHAFHIGCIDQWLEQHATCPLCRDRVSM 170

The following BLAST results are available for this feature:

BLAST of GR405148 vs. SwissProt
BLAST of GR405148 vs. TrEMBL
BLAST of GR405148 vs. TAIR peptide

BLAST of GR405148 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
SDIR1_ARATH	1.812e-31	55.28	E3 ubiquitin-protein ligase SDIR1 OS=Arabidopsis t...	[more]
RNF12_MOUSE	3.927e-10	43.55	E3 ubiquitin-protein ligase RLIM OS=Mus musculus G...	[more]
RNF12_HUMAN	3.927e-10	43.55	E3 ubiquitin-protein ligase RLIM OS=Homo sapiens G...	[more]
RN215_MOUSE	3.927e-10	52.17	RING finger protein 215 OS=Mus musculus GN=Rnf215 ...	[more]
RN215_HUMAN	3.927e-10	52.17	RING finger protein 215 OS=Homo sapiens GN=RNF215 ...	[more]
ATL42_ARATH	3.927e-10	44.83	E3 ubiquitin-protein ligase ATL42 OS=Arabidopsis t...	[more]
RNF12_XENTR	8.749e-10	43.55	E3 ubiquitin-protein ligase RNF12 OS=Xenopus tropi...	[more]
ATL12_ARATH	8.749e-10	44.83	Putative RING-H2 finger protein ATL12 OS=Arabidops...	[more]
RING2_ARATH	1.143e-9	26.96	E3 ubiquitin-protein ligase At1g63170 OS=Arabidops...	[more]
RF12B_XENLA	1.143e-9	43.55	E3 ubiquitin-protein ligase RNF12-B OS=Xenopus lae...	[more]

BLAST of GR405148 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
C6TJK6_SOYBN	1.231e-47	77.17	Putative uncharacterized protein OS=Glycine max PE...	[more]
B9HPE3_POPTR	5.184e-38	65.08	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
D7TLR3_VITVI	5.732e-37	59.38	Whole genome shotgun sequence of line PN40024, sca...	[more]
D7SKC3_VITVI	1.081e-35	59.40	Whole genome shotgun sequence of line PN40024, sca...	[more]
C6TKE4_SOYBN	1.844e-35	64.22	Putative uncharacterized protein OS=Glycine max PE...	[more]
B9S3H0_RICCO	2.408e-35	59.38	Protein binding protein, putative OS=Ricinus commu...	[more]
A5BC54_VITVI	3.145e-35	59.09	Putative uncharacterized protein OS=Vitis vinifera...	[more]
C6TGC2_SOYBN	1.195e-34	64.22	Putative uncharacterized protein OS=Glycine max PE...	[more]
B9HTG7_POPTR	6.558e-33	56.25	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
B9T008_RICCO	1.119e-32	55.81	Protein binding protein, putative OS=Ricinus commu...	[more]

BLAST of GR405148 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 10


Match Name	E-value	Identity	Description
AT3G55530.1	2.001e-32	55.28	\| Symbols: SDIR1 \| RING/U-box superfamily protein ...	[more]
AT4G32600.1	2.080e-13	34.71	\| Symbols: \| RING/U-box superfamily protein \| chr...	[more]
AT1G80400.1	6.053e-13	35.92	\| Symbols: \| RING/U-box superfamily protein \| chr...	[more]
AT1G26800.1	8.740e-12	38.16	\| Symbols: \| RING/U-box superfamily protein \| chr...	[more]
AT5G55970.2	1.142e-11	37.86	\| Symbols: \| RING/U-box superfamily protein \| chr...	[more]
AT5G55970.1	1.142e-11	37.86	\| Symbols: \| RING/U-box superfamily protein \| chr...	[more]
AT3G58720.2	3.321e-11	32.06	\| Symbols: \| RING/U-box superfamily protein \| chr...	[more]
AT3G58720.1	3.321e-11	32.06	\| Symbols: \| RING/U-box superfamily protein \| chr...	[more]
AT4G26580.2	4.338e-11	33.96	\| Symbols: \| RING/U-box superfamily protein \| chr...	[more]
AT4G28890.1	4.338e-11	44.83	\| Symbols: \| RING/U-box superfamily protein \| chr...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	no description	coord: 66..106 score: 2
IPR001841	Zinc finger, RING-type	PROFILE	PS50089	ZF_RING_2	coord: 66..107 score: 12
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	no description	coord: 62..109 score: 8.8
IPR018957	Zinc finger, C3HC4 RING-type	PFAM	PF00097	zf-C3HC4	coord: 66..106 score: 6.2
None	No IPR available	PANTHER	PTHR22766	RING FINGER PROTEIN 24-RELATED	coord: 6..128 score: 9.4
None	No IPR available	PANTHER	PTHR22766:SF1	gb def: Hypothetical protein T22E16.190 (Hypothetical protein T22E16.19) (At3g55530)	coord: 6..128 score: 9.4
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 61..113 score: 3.6

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>GR405148 ID=GR405148; Name=GR405148; organism=Cicer arietinum; type=EST; length=521bp
GCTTTAACAGACTATAGATAGATTACATTCTTATATATGTATGCCAAGCT
ATGGGTGTAATCCAATTCCGAAAATATATACATACTTATGTAACTATATA
TATCGCGCACTTTACAGCCGTATATGAATTAATACTACACAATATTTGAA
CCATCTGACCCTCTCTCCCTGTTTCCCTGCCTTACCAACTGCATCCTAAA
TTTGCACACAGGACATGTTCCTTGCTGCCGAAGCCATTGGTCAATGCAGT
TAGCATGAAACTGATGCAAGCATGGCAAGCTACGCACAAGTTCCGCTCTC
TTAACATGGTCCAGGCATACAGTACATGTCAGCTCATCTTCTGGACCTCT
GACACTTCCCTCTGTTCCTTTGAGGTCTTGTTTAATCTCAGCTGCCTCTG
AAAACGAGGATGCCAAACCAGTGGAGCCATCTATTGCTGGACCTGGAACT
TTATATTTGTGAATAGGCAAAGCATTTATCTCTTCCTCAGTCATTGAAGG
AGTACTAGAGGCAGTATCAGA

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding
GO:0008270	zinc ion binding

Vocabulary: **INTERPRO**
Term	Definition
IPR001841	Znf_RING
IPR013083	Znf_RING/FYVE/PHD
IPR018957	Znf_C3HC4_RING-type

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