GR406538

EST Overview


Name	GR406538
Unique Name	GR406538
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	640

Libraries


Library Name	Type
LIBEST_024786 JG11 Salinity-stressed chickpea root cDNA library	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
KEGG analysis for Cicer arietinum unigene v1	2011-01-05
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

[Close]

BLAST of GR406538 vs. SwissProt
Match: DAPF_ARATH (Diaminopimelate epimerase, chloroplastic OS=Arabidopsis thaliana GN=DAPF PE=1 SV=1)

HSP 1 Score: 216.468 bits (550), Expect = 9.638e-56
Identity = 115/192 (59.90%), Postives = 142/192 (73.96%), Query Frame = 1

Query:   76 MAITATISVPI----TSPSTHRSLGSVNFFIPSSRSI-LASPQRTFQYPNNFRLVASSSMTTESPVKTTTSSISFLHQNETGFLHFAKYHGLGNDFVLIDNRDSSEPKISSEKAVQLCDRNFGVGADGVIFDLPGINGTDYTMRIFNSDGSEPEMCGNGVRCFAKFVSQLESLHGRHSFTIHTGAGKIVPEV 636
            +A  +T+SV       S +  R+LGSV     SS S      +  F+ P+  R+ A++SM   +  K   S  SFL + ETG LHF KYHGLGNDF+L+DNRDSSEPKI+ E+A +LCDRNFGVGADGVIF +PG+NGTDY MRIFNSDGSEPEMCGNGVRCFA+F+++LE+L G+HSFTIHTGAG IVPE+
Sbjct:    3 IAAVSTVSVAPQSRRVSNAFSRNLGSV-----SSLSFGFFEKEYCFKSPS-LRVSAAASMDAVTAEKF--SPASFLDKKETGVLHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFAMPGVNGTDYAMRIFNSDGSEPEMCGNGVRCFARFIAELENLQGKHSFTIHTGAGLIVPEI 186

[Close]

BLAST of GR406538 vs. SwissProt
Match: DAPF_ORYSJ (Diaminopimelate epimerase, chloroplastic OS=Oryza sativa subsp. japonica GN=DAPF PE=2 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 2.542e-48
Identity = 89/145 (61.38%), Postives = 116/145 (80.00%), Query Frame = 1

Query:  205 PNNFRLVASSSMTTESPVKTTTSSISFLHQNETG-FLHFAKYHGLGNDFVLIDNRDSSEPKISSEKAVQLCDRNFGVGADGVIFDLPGINGTDYTMRIFNSDGSEPEMCGNGVRCFAKFVSQLESLHGRHSFTIHTGAGKIVPEV 636
            P   R VA+ +++T      + ++ +FL + E+   LHF KY GLGNDF+++DNRDS+ PK++ E+A +LCDRNFGVGADGVIF +PG+NG DYTMRIFNSDGSEPEMCGNGVRCFA+F+++LE+L G HSF IHTGAG I+PE+
Sbjct:   38 PTARRCVAAMAVSTPR----SAAAAAFLERRESERALHFVKYQGLGNDFIMVDNRDSAVPKVTPEEAAKLCDRNFGVGADGVIFVMPGVNGADYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLQGTHSFKIHTGAGLIIPEI 178

[Close]

BLAST of GR406538 vs. SwissProt
Match: DAPF_ORYSI (Putative diaminopimelate epimerase, chloroplastic OS=Oryza sativa subsp. indica GN=DAPF PE=3 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 4.336e-48
Identity = 89/145 (61.38%), Postives = 116/145 (80.00%), Query Frame = 1

Query:  205 PNNFRLVASSSMTTESPVKTTTSSISFLHQNETG-FLHFAKYHGLGNDFVLIDNRDSSEPKISSEKAVQLCDRNFGVGADGVIFDLPGINGTDYTMRIFNSDGSEPEMCGNGVRCFAKFVSQLESLHGRHSFTIHTGAGKIVPEV 636
            P   R VA+ +++T      + ++ +FL + E+   LHF KY GLGNDF+++DNRDS+ PK++ E+A +LCDRNFGVGADGVIF +PG+NG DYTMRIFNSDGSEPEMCGNGVRCFA+F+++LE+L G HSF IHTGAG I+PE+
Sbjct:   41 PTARRCVAAMAVSTPR----SAAAAAFLERRESERALHFVKYQGLGNDFIMMDNRDSAVPKVTPEEAAKLCDRNFGVGADGVIFVMPGVNGADYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLQGTHSFKIHTGAGLIIPEI 181

[Close]

BLAST of GR406538 vs. SwissProt
Match: DAPF_TRIEI (Diaminopimelate epimerase OS=Trichodesmium erythraeum (strain IMS101) GN=dapF PE=3 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 5.677e-40
Identity = 73/107 (68.22%), Postives = 91/107 (85.05%), Query Frame = 1

Query:  316 FAKYHGLGNDFVLIDNRDSSEPKISSEKAVQLCDRNFGVGADGVIFDLPGINGTDYTMRIFNSDGSEPEMCGNGVRCFAKFVSQLESLHGRHSFTIHTGAGKIVPEV 636
            F KYHGLGNDF+LIDNR   +P ++ E+A++LCDRNFG+GADGVIF LPG+  TDYTMRIFNSDGSEPEMCGNG+RC AKF+++LE+ + +  + IHTGAG IVPE+
Sbjct:    5 FTKYHGLGNDFILIDNRHQLQPILTPEQAIELCDRNFGIGADGVIFALPGVKQTDYTMRIFNSDGSEPEMCGNGIRCLAKFIAELEN-NNKTKYNIHTGAGIIVPEL 110

[Close]

BLAST of GR406538 vs. SwissProt
Match: DAPF2_ANASP (Diaminopimelate epimerase 2 OS=Anabaena sp. (strain PCC 7120) GN=dapF2 PE=3 SV=2)

HSP 1 Score: 160.614 bits (405), Expect = 6.276e-39
Identity = 74/110 (67.27%), Postives = 89/110 (80.91%), Query Frame = 1

Query:  310 LHFAKYHGLGNDFVLIDNRDSSEPKISSEKAVQLCDRNFGVGADGVIFDLPGINGTDYTMRIFNSDGSEPEMCGNGVRCFAKFVSQLESL-HGRHSFTIHTGAGKIVPEV 636
            + F KYHGLGNDF+LIDNR S  P I+ EKAV++CDR+FG+GADGVIF LPG NGTDYTMRIFNSDGSEPEMCGNG+RC A F++ LE L   + ++ IHT AG I P++
Sbjct:    3 IEFTKYHGLGNDFILIDNRASKTPAITPEKAVEMCDRHFGIGADGVIFALPGENGTDYTMRIFNSDGSEPEMCGNGIRCLAAFLADLEGLSRNKDTYRIHTLAGVITPQL 112

[Close]

BLAST of GR406538 vs. SwissProt
Match: DAPF_SYNP6 (Diaminopimelate epimerase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=dapF PE=3 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 8.197e-39
Identity = 74/107 (69.16%), Postives = 89/107 (83.18%), Query Frame = 1

Query:  310 LHFAKYHGLGNDFVLIDNRDSSEPKISSEKAVQLCDRNFGVGADGVIFDLPGINGTDYTMRIFNSDGSEPEMCGNGVRCFAKFVSQLESLHGRHSFTIHTGAGKIVP 630
            L FAKYHGLGNDF+L+DNR+S EP+++ E+AVQ+CDRNFGVGADGVIF LPG   +DY MRIFNSDGSEPEMCGNG+RC AKF+S+L+    +  + I TGAG IVP
Sbjct:    3 LQFAKYHGLGNDFILVDNRESGEPRLTPEQAVQVCDRNFGVGADGVIFALPGSGDSDYVMRIFNSDGSEPEMCGNGIRCLAKFLSELDG-GAQSRYRIATGAGLIVP 108

[Close]

BLAST of GR406538 vs. SwissProt
Match: DAPF_SYNE7 (Diaminopimelate epimerase OS=Synechococcus elongatus (strain PCC 7942) GN=dapF PE=3 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 8.197e-39
Identity = 74/107 (69.16%), Postives = 89/107 (83.18%), Query Frame = 1

Query:  310 LHFAKYHGLGNDFVLIDNRDSSEPKISSEKAVQLCDRNFGVGADGVIFDLPGINGTDYTMRIFNSDGSEPEMCGNGVRCFAKFVSQLESLHGRHSFTIHTGAGKIVP 630
            L FAKYHGLGNDF+L+DNR+S EP+++ E+AVQ+CDRNFGVGADGVIF LPG   +DY MRIFNSDGSEPEMCGNG+RC AKF+S+L+    +  + I TGAG IVP
Sbjct:    3 LQFAKYHGLGNDFILVDNRESGEPRLTPEQAVQVCDRNFGVGADGVIFALPGSGDSDYVMRIFNSDGSEPEMCGNGIRCLAKFLSELDG-GAQSRYRIATGAGLIVP 108

[Close]

BLAST of GR406538 vs. SwissProt
Match: DAPF_SYNY3 (Diaminopimelate epimerase OS=Synechocystis sp. (strain PCC 6803) GN=dapF PE=3 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.071e-38
Identity = 73/110 (66.36%), Postives = 92/110 (83.64%), Query Frame = 1

Query:  310 LHFAKYHGLGNDFVLIDNRDSSEPKISSEKAVQLCDRNFGVGADGVIFDLPGINGTDYTMRIFNSDGSEPEMCGNGVRCFAKFVSQLESLHGRHSFTIHTGAGKIVPEVL 639
            L F+KYHGLGNDF+L+DNR S+EP ++ ++A QLCDR+FG+GADGVIF LPG  GTDYTMRIFNSDGSEPEMCGNG+RC AKF++ LE +  + ++ IHT AG I P++L
Sbjct:    3 LSFSKYHGLGNDFILVDNRQSTEPCLTPDQAQQLCDRHFGIGADGVIFALPGQGGTDYTMRIFNSDGSEPEMCGNGIRCLAKFLADLEGVEEK-TYRIHTLAGVITPQLL 111

[Close]

BLAST of GR406538 vs. SwissProt
Match: DAPF_NOSP7 (Diaminopimelate epimerase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=dapF PE=3 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 3.115e-38
Identity = 73/111 (65.77%), Postives = 89/111 (80.18%), Query Frame = 1

Query:  310 LHFAKYHGLGNDFVLIDNRDSSEPKISSEKAVQLCDRNFGVGADGVIFDLPGINGTDYTMRIFNSDGSEPEMCGNGVRCFAKFVSQLE-SLHGRHSFTIHTGAGKIVPEVL 639
            + F KYHGLGNDF+LIDNR SS P ++ E+A+QLCDR+FG+GADGVIF LPG NGTDYTMRIFNSDGSEPEMCGNG+RC A F++ LE     + S+ IHT  G + P++L
Sbjct:    3 IEFTKYHGLGNDFILIDNRSSSLPVLTPEQAIQLCDRHFGIGADGVIFALPGENGTDYTMRIFNSDGSEPEMCGNGIRCLAGFLADLEGQSRNKDSYRIHTLGGVMTPQLL 113

[Close]

BLAST of GR406538 vs. SwissProt
Match: DAPF_MICAN (Diaminopimelate epimerase OS=Microcystis aeruginosa (strain NIES-843) GN=dapF PE=3 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 1.447e-35
Identity = 70/108 (64.81%), Postives = 87/108 (80.56%), Query Frame = 1

Query:  316 FAKYHGLGNDFVLIDNRDSSEPKISSEKAVQLCDRNFGVGADGVIFDLPGINGTDYTMRIFNSDGSEPEMCGNGVRCFAKFVSQLESLHG-RHSFTIHTGAGKIVPEV 636
            F KY GLGNDF+LIDNR S EP I++E AV +CDR+FG+GADGVIF LPG   TDYTMRIFNSDGSEPEMCGNG+RC A+F+++LE+ +    ++ IHT AG I+P +
Sbjct:    5 FTKYQGLGNDFILIDNRHSPEPLITAEMAVAMCDRHFGIGADGVIFALPGQAETDYTMRIFNSDGSEPEMCGNGIRCLAQFIARLEANNAIGRTYRIHTLAGTIIPRL 112

[Close]

BLAST of GR406538 vs. TrEMBL
Match: B7FIP6_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 311.612 bits (797), Expect = 3.175e-83
Identity = 157/188 (83.51%), Postives = 171/188 (90.96%), Query Frame = 1

Query:   76 MAITATISVPITSPSTHRSLGSVNFFIPSSRSILASPQRTFQYPNNFRLVASSSMTTESPVKTTTSSISFLHQNETGFLHFAKYHGLGNDFVLIDNRDSSEPKISSEKAVQLCDRNFGVGADGVIFDLPGINGTDYTMRIFNSDGSEPEMCGNGVRCFAKFVSQLESLHGRHSFTIHTGAGKIVPEVL 639
            MAITATISV IT+P T RSL S+N  +PSSRSI A+PQ TF+YPN+  +  +SSM TE+P+KTTTS+ SFLH  E+GFLHFAKYHGLGNDFVLIDNRDSSEPKISSEKAVQLCDRNFGVGADGVIF LPGI+GTDYTMRIFNSDGSEPEMCGNGVRCFAKFVSQLESL+GRHSFTIHTGAGKIVPEVL
Sbjct:    1 MAITATISVSITTP-TRRSLSSINSILPSSRSISATPQPTFKYPNSRLVALASSMKTETPIKTTTST-SFLHHKESGFLHFAKYHGLGNDFVLIDNRDSSEPKISSEKAVQLCDRNFGVGADGVIFVLPGIDGTDYTMRIFNSDGSEPEMCGNGVRCFAKFVSQLESLYGRHSFTIHTGAGKIVPEVL 186

[Close]

BLAST of GR406538 vs. TrEMBL
Match: D2DKE8_SOYBN (Diaminopimelate epimerase OS=Glycine max PE=2 SV=1)

HSP 1 Score: 293.508 bits (750), Expect = 8.948e-78
Identity = 155/189 (82.01%), Postives = 169/189 (89.42%), Query Frame = 1

Query:   76 MAITATISVPITSPSTHRSLGSVNFFIP-SSRSILASPQRTFQYPNNFRLVASSSMTTESPVKTTTSSISFLHQNETGFLHFAKYHGLGNDFVLIDNRDSSEPKISSEKAVQLCDRNFGVGADGVIFDLPGINGTDYTMRIFNSDGSEPEMCGNGVRCFAKFVSQLESLHGRHSFTIHTGAGKIVPEVL 639
            MAITATISVP TSPS  R+L SVN   P S+RS L +PQRTF+YPN+ RLV SS M+TE+ VKT  SS SFL++ E+GFLHFAKYHGLGNDFVLIDNRDSSEPKIS+EKAVQLCDRNFGVGADGVIF LPGI+GTDYTMRIFNSDGSEPEMCGNGVRCFAKFVSQLE+LHGRHSFTIHTGAG I+PEVL
Sbjct:    1 MAITATISVPFTSPS-RRTLASVNSLSPRSTRSTLPTPQRTFKYPNS-RLVVSS-MSTETAVKT--SSASFLNRKESGFLHFAKYHGLGNDFVLIDNRDSSEPKISAEKAVQLCDRNFGVGADGVIFVLPGISGTDYTMRIFNSDGSEPEMCGNGVRCFAKFVSQLENLHGRHSFTIHTGAGLIIPEVL 184

[Close]

BLAST of GR406538 vs. TrEMBL
Match: C6T990_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 293.508 bits (750), Expect = 8.948e-78
Identity = 155/189 (82.01%), Postives = 169/189 (89.42%), Query Frame = 1

Query:   76 MAITATISVPITSPSTHRSLGSVNFFIP-SSRSILASPQRTFQYPNNFRLVASSSMTTESPVKTTTSSISFLHQNETGFLHFAKYHGLGNDFVLIDNRDSSEPKISSEKAVQLCDRNFGVGADGVIFDLPGINGTDYTMRIFNSDGSEPEMCGNGVRCFAKFVSQLESLHGRHSFTIHTGAGKIVPEVL 639
            MAITATISVP TSPS  R+L SVN   P S+RS L +PQRTF+YPN+ RLV SS M+TE+ VKT  SS SFL++ E+GFLHFAKYHGLGNDFVLIDNRDSSEPKIS+EKAVQLCDRNFGVGADGVIF LPGI+GTDYTMRIFNSDGSEPEMCGNGVRCFAKFVSQLE+LHGRHSFTIHTGAG I+PEVL
Sbjct:    1 MAITATISVPFTSPS-RRTLASVNSLSPRSTRSTLPTPQRTFKYPNS-RLVVSS-MSTETAVKT--SSASFLNRKESGFLHFAKYHGLGNDFVLIDNRDSSEPKISAEKAVQLCDRNFGVGADGVIFVLPGISGTDYTMRIFNSDGSEPEMCGNGVRCFAKFVSQLENLHGRHSFTIHTGAGLIIPEVL 184

[Close]

BLAST of GR406538 vs. TrEMBL
Match: C6TKD3_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 289.656 bits (740), Expect = 1.292e-76
Identity = 153/189 (80.95%), Postives = 167/189 (88.36%), Query Frame = 1

Query:   76 MAITATISVPITSPSTHRSLGSVNFFIPSS-RSILASPQRTFQYPNNFRLVASSSMTTESPVKTTTSSISFLHQNETGFLHFAKYHGLGNDFVLIDNRDSSEPKISSEKAVQLCDRNFGVGADGVIFDLPGINGTDYTMRIFNSDGSEPEMCGNGVRCFAKFVSQLESLHGRHSFTIHTGAGKIVPEVL 639
            MAI ATISVP+TSP T R+L SVN   P S RS L +PQRTF+YPN+ RLVASS M+TE+ VKT  SS SFL+  E+GFLHFAKYHGLGNDFVLIDNRD+SEP+IS+EKAVQLCDRNFGVGADGVIF LPGINGTDYTMRIFNSD SEPEMCGNGVRCFAKFVSQLE+LHGRHSFTIHTGAG I+PEVL
Sbjct:    1 MAIAATISVPLTSP-TRRTLASVNSLSPHSPRSTLPTPQRTFKYPNS-RLVASS-MSTETAVKT--SSASFLNLKESGFLHFAKYHGLGNDFVLIDNRDTSEPRISAEKAVQLCDRNFGVGADGVIFVLPGINGTDYTMRIFNSDSSEPEMCGNGVRCFAKFVSQLENLHGRHSFTIHTGAGLIIPEVL 184

[Close]

BLAST of GR406538 vs. TrEMBL
Match: B9T434_RICCO (Diaminopimelate epimerase, putative OS=Ricinus communis GN=RCOM_0294430 PE=3 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 1.642e-55
Identity = 114/197 (57.87%), Postives = 147/197 (74.62%), Query Frame = 1

Query:   82 ITATISVPITSPSTHRSLGSVNFF----------IPSSRSILASPQRTFQYPNNFRL--VASSSMTTESPVKTTTSSISFLHQNETGFLHFAKYHGLGNDFVLIDNRDSSEPKISSEKAVQLCDRNFGVGADGVIFDLPGINGTDYTMRIFNSDGSEPEMCGNGVRCFAKFVSQLESLHGRHSFTIHTGAGKIVPEV 636
            + AT+S   T PST   L SV  F          +P+ +S    P  + + PN FRL  V+++SM+ E+P K +T+S  FL + E+G  HF KY GLGNDF+L+DNRDS+EP+I+ E+AV+LCDRNFG+GADGVIF +PG NGTDY+MRIFNSDGSEPEMCGNGVRCFA+F+++LE+L G+ SFTIHTGAG IVPE+
Sbjct:    1 MAATVSSAFT-PSTRHHLTSVTRFRSLYLSNSISLPNFKSNSVKPLISSKNPN-FRLLLVSAASMSAEAPEKISTAS--FLDRRESGIHHFVKYQGLGNDFILVDNRDSTEPRITPEQAVRLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGNGVRCFARFIAELENLQGKQSFTIHTGAGLIVPEI 193

[Close]

BLAST of GR406538 vs. TrEMBL
Match: D7LUJ8_ARALY (Diaminopimelate epimerase family protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_906748 PE=4 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 8.150e-55
Identity = 115/194 (59.28%), Postives = 140/194 (72.16%), Query Frame = 1

Query:   76 MAITATISVPITSPSTH------RSLGSVNFFIPSSRSI-LASPQRTFQYPNNFRLVASSSMTTESPVKTTTSSISFLHQNETGFLHFAKYHGLGNDFVLIDNRDSSEPKISSEKAVQLCDRNFGVGADGVIFDLPGINGTDYTMRIFNSDGSEPEMCGNGVRCFAKFVSQLESLHGRHSFTIHTGAGKIVPEV 636
            M I A  SV +   S        R LGSV     SS S      +  F+ P+  R+ A++SM  ++ +    S  SFL + ETG LHF KYHGLGNDF+L+DNRDSSEPKI+ E+A +LCDRNFGVGADGVIF +PG+NGTDY MRIFNSDGSEPEMCGNGVRCFA+F+++LE+L G+HSFTIHTGAG IVPE+
Sbjct:    1 MEIAAASSVSVAPQSRQLLNVFSRKLGSV-----SSLSFGFFEKEYCFKSPS-LRVSAAASM--DAVIAEKFSPASFLDKKETGVLHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFAMPGVNGTDYAMRIFNSDGSEPEMCGNGVRCFARFIAELENLQGKHSFTIHTGAGLIVPEI 186

[Close]

BLAST of GR406538 vs. TrEMBL
Match: D7TQF7_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_40.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00025612001 PE=4 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 1.816e-54
Identity = 95/122 (77.87%), Postives = 113/122 (92.62%), Query Frame = 1

Query:  271 SSISFLHQNETGFLHFAKYHGLGNDFVLIDNRDSSEPKISSEKAVQLCDRNFGVGADGVIFDLPGINGTDYTMRIFNSDGSEPEMCGNGVRCFAKFVSQLESLHGRHSFTIHTGAGKIVPEV 636
            S  SFL + E+GFLHF KYHGLGNDF+L+DNRDSSEPK++ E+AV+LCDRNFG+GADGVIF +PGINGTDYTMRIFNSDGSEPEMCGNGVRCFA+F+++LE+LHG+ SFT+HTGAG IVPE+
Sbjct:   10 SQTSFLDRKESGFLHFVKYHGLGNDFILVDNRDSSEPKLTPEQAVKLCDRNFGIGADGVIFAMPGINGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLHGKQSFTLHTGAGLIVPEI 131

[Close]

BLAST of GR406538 vs. TrEMBL
Match: B9HCY9_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_717427 PE=3 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 3.786e-52
Identity = 96/131 (73.28%), Postives = 116/131 (88.55%), Query Frame = 1

Query:  250 SPVKTTTSSISFL-HQNETGFLHFAKYHGLGNDFVLIDNRDSSEPKISSEKAVQLCDRNFGVGADGVIFDLPGINGTDYTMRIFNSDGSEPEMCGNGVRCFAKFVSQLESLHG-RHSFTIHTGAGKIVPEV 636
            +P +T++ S SFL H+  + FLHF KYHGLGNDF+++DNRDSSEPKI  E+AV+LCDRNFG+GADGVIF LPG+NGTDYTMRIFNSDGSEPEMCGNGVRCFA+F+++LE+ HG R SFT+HTGAG IVPE+
Sbjct:    8 APQETSSKSSSFLDHKEGSRFLHFVKYHGLGNDFIVLDNRDSSEPKIRPEQAVKLCDRNFGIGADGVIFALPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENFHGKRQSFTVHTGAGLIVPEI 138

[Close]

BLAST of GR406538 vs. TrEMBL
Match: B4F833_MAIZE (Diaminopimelate epimerase OS=Zea mays PE=2 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 1.140e-48
Identity = 102/188 (54.26%), Postives = 132/188 (70.21%), Query Frame = 1

Query:   79 AITATISVPITSPS-THRSLGSVNFFIPSSRSILASPQRTFQYPNNFRLVASSSMTTESPVKTTTSSISFLHQNETG-FLHFAKYHGLGNDFVLIDNRDSSEPKISSEKAVQLCDRNFGVGADGVIFDLPGINGTDYTMRIFNSDGSEPEMCGNGVRCFAKFVSQLESLHGRHSFTIHTGAGKIVPEV 636
            A TA   V + +P+ T    G V   +   R + A+P+R           A +SM   +P   + ++ SFL + E+   LHF KY GLGNDF+++DNRDSS PK++ E+A +LCDRNFG+GADGVIF +PG+N  DYTMRIFNSDGSEPEMCGNGVRCFA+F+ +LE+L G HSFTIHTGAGKI+PE+
Sbjct:    5 AATAFAGVSVATPNLTTPFRGRVRLPL---RGVSAAPRR-----------AVASMAVSAP--RSGAAASFLERRESERALHFVKYQGLGNDFIMVDNRDSSVPKVTPEEAAKLCDRNFGIGADGVIFVMPGVNDADYTMRIFNSDGSEPEMCGNGVRCFARFIGELENLQGTHSFTIHTGAGKIIPEI 176

[Close]

BLAST of GR406538 vs. TrEMBL
Match: B9IGD7_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_257863 PE=3 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 2.539e-48
Identity = 87/110 (79.09%), Postives = 103/110 (93.64%), Query Frame = 1

Query:  310 LHFAKYHGLGNDFVLIDNRDSSEPKISSEKAVQLCDRNFGVGADGVIFDLPGINGTDYTMRIFNSDGSEPEMCGNGVRCFAKFVSQLESLHGRH-SFTIHTGAGKIVPEV 636
            LHF KYHGLGNDF+L+DNRDSSEPKI+ E+A +LCDRNFG+GADGVIF LPGINGTDYTMRIFNSDGSEPEMCGNGVRCFA+F++++E+LHG+  SF++HTGAG IVPE+
Sbjct:    1 LHFVKYHGLGNDFILVDNRDSSEPKITPEQAAKLCDRNFGIGADGVIFALPGINGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAEIENLHGKKLSFSVHTGAGLIVPEI 110

[Close]

BLAST of GR406538 vs. TAIR peptide
Match: AT3G53580.1 (| Symbols: | diaminopimelate epimerase family protein | chr3:19864784-19866907 FORWARD LENGTH=362)

HSP 1 Score: 216.468 bits (550), Expect = 9.893e-57
Identity = 115/192 (59.90%), Postives = 142/192 (73.96%), Query Frame = 1

Query:   76 MAITATISVPI----TSPSTHRSLGSVNFFIPSSRSI-LASPQRTFQYPNNFRLVASSSMTTESPVKTTTSSISFLHQNETGFLHFAKYHGLGNDFVLIDNRDSSEPKISSEKAVQLCDRNFGVGADGVIFDLPGINGTDYTMRIFNSDGSEPEMCGNGVRCFAKFVSQLESLHGRHSFTIHTGAGKIVPEV 636
            +A  +T+SV       S +  R+LGSV     SS S      +  F+ P+  R+ A++SM   +  K   S  SFL + ETG LHF KYHGLGNDF+L+DNRDSSEPKI+ E+A +LCDRNFGVGADGVIF +PG+NGTDY MRIFNSDGSEPEMCGNGVRCFA+F+++LE+L G+HSFTIHTGAG IVPE+
Sbjct:    3 IAAVSTVSVAPQSRRVSNAFSRNLGSV-----SSLSFGFFEKEYCFKSPS-LRVSAAASMDAVTAEKF--SPASFLDKKETGVLHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFAMPGVNGTDYAMRIFNSDGSEPEMCGNGVRCFARFIAELENLQGKHSFTIHTGAGLIVPEI 186

The following BLAST results are available for this feature:

BLAST of GR406538 vs. SwissProt
BLAST of GR406538 vs. TrEMBL
BLAST of GR406538 vs. TAIR peptide

BLAST of GR406538 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
DAPF_ARATH	9.638e-56	59.90	Diaminopimelate epimerase, chloroplastic OS=Arabid...	[more]
DAPF_ORYSJ	2.542e-48	61.38	Diaminopimelate epimerase, chloroplastic OS=Oryza ...	[more]
DAPF_ORYSI	4.336e-48	61.38	Putative diaminopimelate epimerase, chloroplastic ...	[more]
DAPF_TRIEI	5.677e-40	68.22	Diaminopimelate epimerase OS=Trichodesmium erythra...	[more]
DAPF2_ANASP	6.276e-39	67.27	Diaminopimelate epimerase 2 OS=Anabaena sp. (strai...	[more]
DAPF_SYNP6	8.197e-39	69.16	Diaminopimelate epimerase OS=Synechococcus sp. (st...	[more]
DAPF_SYNE7	8.197e-39	69.16	Diaminopimelate epimerase OS=Synechococcus elongat...	[more]
DAPF_SYNY3	1.071e-38	66.36	Diaminopimelate epimerase OS=Synechocystis sp. (st...	[more]
DAPF_NOSP7	3.115e-38	65.77	Diaminopimelate epimerase OS=Nostoc punctiforme (s...	[more]
DAPF_MICAN	1.447e-35	64.81	Diaminopimelate epimerase OS=Microcystis aeruginos...	[more]

BLAST of GR406538 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
B7FIP6_MEDTR	3.175e-83	83.51	Putative uncharacterized protein OS=Medicago trunc...	[more]
D2DKE8_SOYBN	8.948e-78	82.01	Diaminopimelate epimerase OS=Glycine max PE=2 SV=1	[more]
C6T990_SOYBN	8.948e-78	82.01	Putative uncharacterized protein OS=Glycine max PE...	[more]
C6TKD3_SOYBN	1.292e-76	80.95	Putative uncharacterized protein OS=Glycine max PE...	[more]
B9T434_RICCO	1.642e-55	57.87	Diaminopimelate epimerase, putative OS=Ricinus com...	[more]
D7LUJ8_ARALY	8.150e-55	59.28	Diaminopimelate epimerase family protein OS=Arabid...	[more]
D7TQF7_VITVI	1.816e-54	77.87	Whole genome shotgun sequence of line PN40024, sca...	[more]
B9HCY9_POPTR	3.786e-52	73.28	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
B4F833_MAIZE	1.140e-48	54.26	Diaminopimelate epimerase OS=Zea mays PE=2 SV=1	[more]
B9IGD7_POPTR	2.539e-48	79.09	Predicted protein (Fragment) OS=Populus trichocarp...	[more]

BLAST of GR406538 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 1


Match Name	E-value	Identity	Description
AT3G53580.1	9.893e-57	59.90	\| Symbols: \| diaminopimelate epimerase family pro...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001653	Diaminopimelate epimerase	PFAM	PF01678	DAP_epimerase	coord: 89..195 score: 4.5
IPR018510	Diaminopimelate epimerase, active site	PROSITE	PS01326	DAP_EPIMERASE	coord: 150..164 score
None	No IPR available	GENE3D	3.10.310.10	no description	coord: 87..195 score: 1.4
None	No IPR available	SUPERFAMILY	54506	Diaminopimelate epimerase-like	coord: 87..195 score: 8.7

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>GR406538 ID=GR406538; Name=GR406538; organism=Cicer arietinum; type=EST; length=640bp
GGCAGTATCAAAATCAAAACGAGTGAACAAGAGAGATTCACATAACCGTA
GCCGCCATCATTCGAAAGTGAACCGATGGCCATAACCGCCACCATTTCAG
TTCCAATTACATCACCTAGTACTCATCGCTCTCTTGGTTCCGTGAATTTC
TTTATCCCTTCTTCCCGATCCATTTTGGCTTCTCCACAACGCACTTTTCA
ATACCCTAATAATTTCCGCCTCGTTGCTTCCTCTTCCATGACAACTGAAT
CTCCCGTTAAAACAACGACTTCCTCCATTTCCTTCCTTCACCAAAACGAG
ACTGGATTTCTCCATTTCGCTAAGTATCACGGCCTCGGAAACGACTTCGT
TTTGATCGATAATAGAGACTCTTCCGAGCCAAAGATTAGTTCAGAGAAAG
CTGTGCAACTCTGCGATCGTAACTTTGGTGTTGGTGCTGATGGAGTTATT
TTTGACTTGCCTGGTATCAATGGCACTGACTATACAATGAGGATTTTCAA
TTCTGATGGTAGTGAGCCTGAGATGTGTGGCAATGGAGTGCGATGTTTTG
CTAAATTCGTTTCTCAGCTTGAGAGTTTACATGGGAGGCACAGTTTCACC
ATACACACTGGTGCTGGGAAGATTGTTCCTGAAGTCTTGG

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **Cellular Component**
Term	Definition
GO:0005737	cytoplasm

Vocabulary: **Molecular Function**
Term	Definition
GO:0008837	diaminopimelate epimerase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0009089	lysine biosynthetic process via diaminopimelate

Vocabulary: **INTERPRO**
Term	Definition
IPR001653	DAP_epimerase_DapF
IPR018510	DAP_epimerase_AS

Search form