GR406934
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GR406934 vs. SwissProt
Match: SYP81_ARATH (Syntaxin-81 OS=Arabidopsis thaliana GN=SYP81 PE=2 SV=2) HSP 1 Score: 146.362 bits (368), Expect = 7.858e-35 Identity = 83/136 (61.03%), Postives = 94/136 (69.12%), Query Frame = -2 Query: 113 RVTKKDFTETFKSGDVELSEPDELRSEPLRVQQQ-LLDDETRAFQVELFSFLDTVQETETKMVEMFALNHLMATHVLQQAQQIEHLYDQAVEATKNVEFGNKELSQAIQRNXXXXXXXXXXXXXXXXXXXXLDWYS 517 RV K+ G+ E EPDE++++P R+QQQ LLDDET+A QVEL + LD ++TETKMVEM ALNHLMATHVLQQAQQIE LYDQAVEATKNVE GNKELSQAIQRN LDWYS Sbjct: 175 RVIKEATPINTTLGNSESIEPDEIQAQPRRLQQQQLLDDETQALQVELSNLLDGARQTETKMVEMSALNHLMATHVLQQAQQIEFLYDQAVEATKNVELGNKELSQAIQRNSSSRTFLLLFFFVLTFSVLFLDWYS 310
BLAST of GR406934 vs. SwissProt
Match: STX18_DANRE (Syntaxin-18 OS=Danio rerio GN=stx18 PE=2 SV=1) HSP 1 Score: 60.8474 bits (146), Expect = 4.342e-9 Identity = 35/121 (28.93%), Postives = 62/121 (51.24%), Query Frame = -2 Query: 116 GDVELSEPDELRSEPLRVQQQLLDDETRAFQVELFSFLDTVQETETKMVEMFALNHLMATHVLQQAQQIEHLYDQAVEATKNVEFGNKELSQAIQRNXXXXXXXXXXXXXXXXXXXXLDWY 478 G+V+L E + + + + Q+ + E + E+ S LD V++ E K+VE+ L + + VLQQ +I+ ++ V AT+NV+ GN+++ +AI+ N LDWY Sbjct: 192 GNVDLWEENRVEDDLSPEEIQMFEQENQRLVGEMNSLLDEVRQIEGKVVEISRLQEIFSEKVLQQETEIDSIHQLVVGATENVKEGNEDIREAIKNNAGFRVWILFFLVMCSFSLLFLDWY 312
BLAST of GR406934 vs. SwissProt
Match: STX18_RAT (Syntaxin-18 OS=Rattus norvegicus GN=Stx18 PE=2 SV=1) HSP 1 Score: 55.0694 bits (131), Expect = 2.383e-7 Identity = 33/113 (29.20%), Postives = 55/113 (48.67%), Query Frame = -2 Query: 116 DELRSEPLRVQQQLLDDETRAFQVELFSFLDTVQETETKMVEMFALNHLMATHVLQQAQQIEHLYDQAVEATKNVEFGNKELSQAIQRNXXXXXXXXXXXXXXXXXXXXLDWY 454 DEL E + Q+ + E + E+ S D V++ E K+VE+ L + VLQQ +I+ ++ V AT+N++ GN+++ +AI+ N LDWY Sbjct: 224 DELSPEEI----QMFEQENQRLIGEMNSLFDEVRQIEGKVVEISRLQEIFTEKVLQQETEIDSIHQLVVGATENIKEGNEDIREAIKNNAGFRVWILFFLVMCSFSLLFLDWY 332
BLAST of GR406934 vs. SwissProt
Match: STX18_MOUSE (Syntaxin-18 OS=Mus musculus GN=Stx18 PE=2 SV=2) HSP 1 Score: 55.0694 bits (131), Expect = 2.383e-7 Identity = 33/113 (29.20%), Postives = 55/113 (48.67%), Query Frame = -2 Query: 116 DELRSEPLRVQQQLLDDETRAFQVELFSFLDTVQETETKMVEMFALNHLMATHVLQQAQQIEHLYDQAVEATKNVEFGNKELSQAIQRNXXXXXXXXXXXXXXXXXXXXLDWY 454 DEL E + Q+ + E + E+ S D V++ E K+VE+ L + VLQQ +I+ ++ V AT+N++ GN+++ +AI+ N LDWY Sbjct: 224 DELSPEEI----QMFEQENQRLIGEMNSLFDEVRQIEGKVVEISRLQEIFTEKVLQQETEIDSIHQLVVGATENIKEGNEDIREAIKNNAGFRVWILFFLVMCSFSLLFLDWY 332
BLAST of GR406934 vs. SwissProt
Match: STX18_PONAB (Syntaxin-18 OS=Pongo abelii GN=STX18 PE=2 SV=1) HSP 1 Score: 53.9138 bits (128), Expect = 5.308e-7 Identity = 32/113 (28.32%), Postives = 55/113 (48.67%), Query Frame = -2 Query: 116 DELRSEPLRVQQQLLDDETRAFQVELFSFLDTVQETETKMVEMFALNHLMATHVLQQAQQIEHLYDQAVEATKNVEFGNKELSQAIQRNXXXXXXXXXXXXXXXXXXXXLDWY 454 DEL E + Q+ + E + E+ S D V++ E ++VE+ L + VLQQ +I+ ++ V AT+N++ GN+++ +AI+ N LDWY Sbjct: 225 DELSPEEI----QMFEQENQRLIGEMNSLFDEVRQIEGRVVEISRLQEIFTEKVLQQEAEIDSIHQLVVGATENIKEGNEDIREAIKNNAGFRVWILFFLVMCSFSLLFLDWY 333
BLAST of GR406934 vs. SwissProt
Match: STX18_HUMAN (Syntaxin-18 OS=Homo sapiens GN=STX18 PE=1 SV=1) HSP 1 Score: 53.9138 bits (128), Expect = 5.308e-7 Identity = 32/113 (28.32%), Postives = 55/113 (48.67%), Query Frame = -2 Query: 116 DELRSEPLRVQQQLLDDETRAFQVELFSFLDTVQETETKMVEMFALNHLMATHVLQQAQQIEHLYDQAVEATKNVEFGNKELSQAIQRNXXXXXXXXXXXXXXXXXXXXLDWY 454 DEL E + Q+ + E + E+ S D V++ E ++VE+ L + VLQQ +I+ ++ V AT+N++ GN+++ +AI+ N LDWY Sbjct: 225 DELSPEEI----QMFEQENQRLIGEMNSLFDEVRQIEGRVVEISRLQEIFTEKVLQQEAEIDSIHQLVVGATENIKEGNEDIREAIKNNAGFRVWILFFLVMCSFSLLFLDWY 333
BLAST of GR406934 vs. TrEMBL
Match: C6TGA0_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 182.185 bits (461), Expect = 1.664e-44 Identity = 97/136 (71.32%), Postives = 102/136 (75.00%), Query Frame = -2 Query: 113 NRVTKKDFTETFKSGDVELSEPDELRSEPLRVQQQLLDDETRAFQVELFSFLDTVQETETKMVEMFALNHLMATHVLQQAQQIEHLYDQAVEATKNVEFGNKELSQAIQRNXXXXXXXXXXXXXXXXXXXXLDWYS 520 NRV + D ET KS D+EL EP+ELR+EPLRVQQQLLDDETRA QVEL S LDTVQETETKMVEM ALNHLM+THVL QAQQIEHLYDQAVEAT NVE GNKELSQAIQRN LDWYS Sbjct: 174 NRVARNDSAETSKSSDMELREPEELRAEPLRVQQQLLDDETRALQVELTSLLDTVQETETKMVEMSALNHLMSTHVLHQAQQIEHLYDQAVEATNNVELGNKELSQAIQRNSSSRTFLLLFLFVLTFSILFLDWYS 309
BLAST of GR406934 vs. TrEMBL
Match: D7TMI3_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_19.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00016388001 PE=4 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 1.045e-38 Identity = 90/136 (66.18%), Postives = 98/136 (72.06%), Query Frame = -2 Query: 113 NRVTKKDFTETFKSGDVELSEPDELRSEPLRVQQQLLDDETRAFQVELFSFLDTVQETETKMVEMFALNHLMATHVLQQAQQIEHLYDQAVEATKNVEFGNKELSQAIQRNXXXXXXXXXXXXXXXXXXXXLDWYS 520 NRV+ + TE KS + EL EPDE + EPLRVQQQLLDDETRA QVEL S LD VQETET+MVEM ALNHLM+TH+LQQAQQIE LY+QAVEAT NVE GNKELSQAIQRN LDWYS Sbjct: 174 NRVSSSNATEIPKSINSELREPDEPQPEPLRVQQQLLDDETRALQVELSSLLDAVQETETQMVEMSALNHLMSTHILQQAQQIELLYEQAVEATSNVELGNKELSQAIQRNSSSRTFLLLFLFVLTFSIIFLDWYS 309
BLAST of GR406934 vs. TrEMBL
Match: B9HT21_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_567325 PE=4 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 3.970e-38 Identity = 87/138 (63.04%), Postives = 100/138 (72.46%), Query Frame = -2 Query: 113 NRVTKKDFT--ETFKSGDVELSEPDELRSEPLRVQQQLLDDETRAFQVELFSFLDTVQETETKMVEMFALNHLMATHVLQQAQQIEHLYDQAVEATKNVEFGNKELSQAIQRNXXXXXXXXXXXXXXXXXXXXLDWYS 520 NR K+ + ++ K+ +++ EPDE++ EPLRVQQQLLDDETRA QVEL S LD VQETETKMVEM ALNHLM+THVLQQAQQIE LY+QAVEATKNVE GNKELSQA+QRN LDWYS Sbjct: 174 NRAANKNTSSVDSSKTNNLDFMEPDEIQPEPLRVQQQLLDDETRALQVELTSLLDAVQETETKMVEMSALNHLMSTHVLQQAQQIELLYEQAVEATKNVELGNKELSQAVQRNSSSRTFLLLFLFVLTFSILFLDWYS 311
BLAST of GR406934 vs. TrEMBL
Match: B9SAI5_RICCO (Syntaxin-81, putative OS=Ricinus communis GN=RCOM_0587330 PE=4 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.081e-35 Identity = 81/136 (59.56%), Postives = 94/136 (69.12%), Query Frame = -2 Query: 113 NRVTKKDFTETFKSGDVELSEPDELRSEPLRVQQQLLDDETRAFQVELFSFLDTVQETETKMVEMFALNHLMATHVLQQAQQIEHLYDQAVEATKNVEFGNKELSQAIQRNXXXXXXXXXXXXXXXXXXXXLDWYS 520 NRV ++ K + + EPDE++SEPL +QQQLLDDETRA Q EL S LD Q+TETK+VEM ALNHLM+THVLQQAQQIE LY+QA+EATKNV+ GNKELSQAIQRN LDWYS Sbjct: 174 NRVVNPSPIDSSKMNNSDRREPDEIQSEPLSIQQQLLDDETRALQAELTSLLDAAQQTETKIVEMSALNHLMSTHVLQQAQQIEVLYEQAIEATKNVQLGNKELSQAIQRNSSSRTFLLLFLFVLTFSVLFLDWYS 309
BLAST of GR406934 vs. TrEMBL
Match: Q7X7I8_ORYSJ (OSJNBa0074L08.20 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0074L08.20 PE=2 SV=2) HSP 1 Score: 147.132 bits (370), Expect = 5.932e-34 Identity = 79/121 (65.29%), Postives = 87/121 (71.90%), Query Frame = -2 Query: 113 DVELSEPDELRSEPLRVQQQLLDDETRAFQVELFSFLDTVQETETKMVEMFALNHLMATHVLQQAQQIEHLYDQAVEATKNVEFGNKELSQAIQRNXXXXXXXXXXXXXXXXXXXXLDWYS 475 DV E E+ + PLRVQ+QLLDDETRA QVEL + LD VQETETKM+EM ALNHLM+THVLQQAQQI++LYDQAVEAT NVE GNKELSQAIQRN LDWYS Sbjct: 195 DVSKVEDQEVSTAPLRVQEQLLDDETRALQVELTNLLDAVQETETKMIEMSALNHLMSTHVLQQAQQIQYLYDQAVEATNNVERGNKELSQAIQRNSSSRTFLLLFFFVLTFSVLFLDWYS 315
BLAST of GR406934 vs. TrEMBL
Match: Q25AH0_ORYSA (B1011H02.1 protein OS=Oryza sativa GN=B1011H02.1 PE=4 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 5.932e-34 Identity = 79/121 (65.29%), Postives = 87/121 (71.90%), Query Frame = -2 Query: 113 DVELSEPDELRSEPLRVQQQLLDDETRAFQVELFSFLDTVQETETKMVEMFALNHLMATHVLQQAQQIEHLYDQAVEATKNVEFGNKELSQAIQRNXXXXXXXXXXXXXXXXXXXXLDWYS 475 DV E E+ + PLRVQ+QLLDDETRA QVEL + LD VQETETKM+EM ALNHLM+THVLQQAQQI++LYDQAVEAT NVE GNKELSQAIQRN LDWYS Sbjct: 224 DVSKVEDQEVSTAPLRVQEQLLDDETRALQVELTNLLDAVQETETKMIEMSALNHLMSTHVLQQAQQIQYLYDQAVEATNNVERGNKELSQAIQRNSSSRTFLLLFFFVLTFSVLFLDWYS 344
BLAST of GR406934 vs. TrEMBL
Match: Q00RI8_ORYSA (OSIGBa0155K17.12 protein OS=Oryza sativa GN=OSIGBa0155K17.12 PE=4 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 5.932e-34 Identity = 79/121 (65.29%), Postives = 87/121 (71.90%), Query Frame = -2 Query: 113 DVELSEPDELRSEPLRVQQQLLDDETRAFQVELFSFLDTVQETETKMVEMFALNHLMATHVLQQAQQIEHLYDQAVEATKNVEFGNKELSQAIQRNXXXXXXXXXXXXXXXXXXXXLDWYS 475 DV E E+ + PLRVQ+QLLDDETRA QVEL + LD VQETETKM+EM ALNHLM+THVLQQAQQI++LYDQAVEAT NVE GNKELSQAIQRN LDWYS Sbjct: 116 DVSKVEDQEVSTAPLRVQEQLLDDETRALQVELTNLLDAVQETETKMIEMSALNHLMSTHVLQQAQQIQYLYDQAVEATNNVERGNKELSQAIQRNSSSRTFLLLFFFVLTFSVLFLDWYS 236
BLAST of GR406934 vs. TrEMBL
Match: B9GBY2_ORYSJ (Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_35261 PE=4 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 5.932e-34 Identity = 79/121 (65.29%), Postives = 87/121 (71.90%), Query Frame = -2 Query: 113 DVELSEPDELRSEPLRVQQQLLDDETRAFQVELFSFLDTVQETETKMVEMFALNHLMATHVLQQAQQIEHLYDQAVEATKNVEFGNKELSQAIQRNXXXXXXXXXXXXXXXXXXXXLDWYS 475 DV E E+ + PLRVQ+QLLDDETRA QVEL + LD VQETETKM+EM ALNHLM+THVLQQAQQI++LYDQAVEAT NVE GNKELSQAIQRN LDWYS Sbjct: 195 DVSKVEDQEVSTAPLRVQEQLLDDETRALQVELTNLLDAVQETETKMIEMSALNHLMSTHVLQQAQQIQYLYDQAVEATNNVERGNKELSQAIQRNSSSRTFLLLFFFVLTFSVLFLDWYS 315
BLAST of GR406934 vs. TrEMBL
Match: B8BN91_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_37514 PE=4 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 5.932e-34 Identity = 79/121 (65.29%), Postives = 87/121 (71.90%), Query Frame = -2 Query: 113 DVELSEPDELRSEPLRVQQQLLDDETRAFQVELFSFLDTVQETETKMVEMFALNHLMATHVLQQAQQIEHLYDQAVEATKNVEFGNKELSQAIQRNXXXXXXXXXXXXXXXXXXXXLDWYS 475 DV E E+ + PLRVQ+QLLDDETRA QVEL + LD VQETETKM+EM ALNHLM+THVLQQAQQI++LYDQAVEAT NVE GNKELSQAIQRN LDWYS Sbjct: 195 DVSKVEDQEVSTAPLRVQEQLLDDETRALQVELTNLLDAVQETETKMIEMSALNHLMSTHVLQQAQQIQYLYDQAVEATNNVERGNKELSQAIQRNSSSRTFLLLFFFVLTFSVLFLDWYS 315
BLAST of GR406934 vs. TrEMBL
Match: B8ASD3_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_16746 PE=4 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 5.932e-34 Identity = 79/121 (65.29%), Postives = 87/121 (71.90%), Query Frame = -2 Query: 113 DVELSEPDELRSEPLRVQQQLLDDETRAFQVELFSFLDTVQETETKMVEMFALNHLMATHVLQQAQQIEHLYDQAVEATKNVEFGNKELSQAIQRNXXXXXXXXXXXXXXXXXXXXLDWYS 475 DV E E+ + PLRVQ+QLLDDETRA QVEL + LD VQETETKM+EM ALNHLM+THVLQQAQQI++LYDQAVEAT NVE GNKELSQAIQRN LDWYS Sbjct: 195 DVSKVEDQEVSTAPLRVQEQLLDDETRALQVELTNLLDAVQETETKMIEMSALNHLMSTHVLQQAQQIQYLYDQAVEATNNVERGNKELSQAIQRNSSSRTFLLLFFFVLTFSVLFLDWYS 315
BLAST of GR406934 vs. TAIR peptide
Match: AT1G51740.1 (| Symbols: SYP81, ATUFE1, ATSYP81, UFE1 | syntaxin of plants 81 | chr1:19189063-19191188 FORWARD LENGTH=310) HSP 1 Score: 146.362 bits (368), Expect = 8.680e-36 Identity = 83/136 (61.03%), Postives = 94/136 (69.12%), Query Frame = -2 Query: 113 RVTKKDFTETFKSGDVELSEPDELRSEPLRVQQQ-LLDDETRAFQVELFSFLDTVQETETKMVEMFALNHLMATHVLQQAQQIEHLYDQAVEATKNVEFGNKELSQAIQRNXXXXXXXXXXXXXXXXXXXXLDWYS 517 RV K+ G+ E EPDE++++P R+QQQ LLDDET+A QVEL + LD ++TETKMVEM ALNHLMATHVLQQAQQIE LYDQAVEATKNVE GNKELSQAIQRN LDWYS Sbjct: 175 RVIKEATPINTTLGNSESIEPDEIQAQPRRLQQQQLLDDETQALQVELSNLLDGARQTETKMVEMSALNHLMATHVLQQAQQIEFLYDQAVEATKNVELGNKELSQAIQRNSSSRTFLLLFFFVLTFSVLFLDWYS 310 The following BLAST results are available for this feature:
BLAST of GR406934 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot) Total hits: 6
BLAST of GR406934 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl) Total hits: 10
BLAST of GR406934 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide) Total hits: 1
InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GR406934 ID=GR406934; Name=GR406934; organism=Cicer arietinum; type=EST; length=521bpback to top |