GR407119

EST Overview
NameGR407119
Unique NameGR407119
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length397
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Homology
BLAST of GR407119 vs. SwissProt
Match: R27A2_ARATH (60S ribosomal protein L27a-2 OS=Arabidopsis thaliana GN=RPL27AB PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 8.007e-13
Identity = 39/70 (55.71%), Postives = 49/70 (70.00%), Query Frame = 1
Query:    1 LSSLISQEVKDKASKENKAPVIDVTQFGFFKLLGKGVLPQNQPFVVKTKLISXXXXXXXXXXXXXVILTA 210
            L SL+ ++VK K+SK+N  P+IDVTQ GFFK+LGKG LP+N+PFVVK KLIS             V+LTA
Sbjct:   78 LWSLVPEDVKAKSSKDN-VPLIDVTQHGFFKVLGKGHLPENKPFVVKAKLISKTAEKKIKEAGGAVVLTA 146          
BLAST of GR407119 vs. SwissProt
Match: R27A3_ARATH (60S ribosomal protein L27a-3 OS=Arabidopsis thaliana GN=RPL27AC PE=2 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 1.784e-12
Identity = 38/70 (54.29%), Postives = 49/70 (70.00%), Query Frame = 1
Query:    1 LSSLISQEVKDKASKENKAPVIDVTQFGFFKLLGKGVLPQNQPFVVKTKLISXXXXXXXXXXXXXVILTA 210
            L SL+ ++VK K++K+N  P+IDVTQ GFFK+LGKG LP+N+PFVVK KLIS             V+LTA
Sbjct:   78 LWSLVPEDVKAKSTKDN-VPLIDVTQHGFFKVLGKGHLPENKPFVVKAKLISKTAEKKIKEAGGAVVLTA 146          
BLAST of GR407119 vs. SwissProt
Match: RL27A_TETTH (60S ribosomal protein L27a OS=Tetrahymena thermophila GN=RPL27A PE=1 SV=1)

HSP 1 Score: 54.299 bits (129), Expect = 2.256e-7
Identity = 34/71 (47.89%), Postives = 40/71 (56.34%), Query Frame = 1
Query:    1 LSSLISQEVKDK-ASKENKAPVIDVTQFGFFKLLGKGVLPQNQPFVVKTKLISXXXXXXXXXXXXXVILTA 210
            L SL+S   + K A  + K PVIDVT+ GFFK+LGKG LP NQP VVK K  S              +LTA
Sbjct:   80 LWSLVSDATRQKYAEDKKKVPVIDVTKAGFFKVLGKGRLP-NQPVVVKAKYFSKTAERRIVAVGGACVLTA 149          
BLAST of GR407119 vs. TrEMBL
Match: B7FMM6_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 8.072e-19
Identity = 50/70 (71.43%), Postives = 55/70 (78.57%), Query Frame = 1
Query:    1 LSSLISQEVKDKASKENKAPVIDVTQFGFFKLLGKGVLPQNQPFVVKTKLISXXXXXXXXXXXXXVILTA 210
            ++SLI Q+VK+KA KENKAPVIDVTQFGFFKLLGKGVLPQNQPFVVKTKLIS             V+LTA
Sbjct:   78 IASLIPQDVKEKALKENKAPVIDVTQFGFFKLLGKGVLPQNQPFVVKTKLISKIAEKKIKEAGGAVVLTA 147          
BLAST of GR407119 vs. TrEMBL
Match: C6SYJ4_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 1.522e-17
Identity = 48/70 (68.57%), Postives = 53/70 (75.71%), Query Frame = 1
Query:    1 LSSLISQEVKDKASKENKAPVIDVTQFGFFKLLGKGVLPQNQPFVVKTKLISXXXXXXXXXXXXXVILTA 210
            L SL+ QEVKDKASKENKAP+IDVTQFG+FK+LGKGVLPQNQP VVK KLIS             V+LTA
Sbjct:   78 LWSLVPQEVKDKASKENKAPLIDVTQFGYFKVLGKGVLPQNQPVVVKAKLISKIAEKKIKEAGGAVVLTA 147          
BLAST of GR407119 vs. TrEMBL
Match: C6T6T0_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 5.785e-17
Identity = 47/70 (67.14%), Postives = 52/70 (74.29%), Query Frame = 1
Query:    1 LSSLISQEVKDKASKENKAPVIDVTQFGFFKLLGKGVLPQNQPFVVKTKLISXXXXXXXXXXXXXVILTA 210
            L SL+ QEVKDKASKENKAP+IDVTQFG+FK+LGKGVLPQNQP VVK KLI              V+LTA
Sbjct:   78 LWSLVPQEVKDKASKENKAPLIDVTQFGYFKVLGKGVLPQNQPVVVKAKLIPKIAEKKIKEAGGAVVLTA 147          
BLAST of GR407119 vs. TrEMBL
Match: B6VC54_VERFO (60S ribosomal protein L27A OS=Vernicia fordii GN=RPL27A PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 5.986e-14
Identity = 41/70 (58.57%), Postives = 51/70 (72.86%), Query Frame = 1
Query:    1 LSSLISQEVKDKASKENKAPVIDVTQFGFFKLLGKGVLPQNQPFVVKTKLISXXXXXXXXXXXXXVILTA 210
            L S++ QEVKDKASK+N  P++DVTQFG+FK+LGKGVLP+NQP VVK KL+S             V+LTA
Sbjct:   78 LWSMVPQEVKDKASKDN-VPMLDVTQFGYFKVLGKGVLPENQPIVVKAKLVSKIAEKKIKENGGAVVLTA 146          
BLAST of GR407119 vs. TrEMBL
Match: C6SX86_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.275e-13
Identity = 42/70 (60.00%), Postives = 50/70 (71.43%), Query Frame = 1
Query:    1 LSSLISQEVKDKASKENKAPVIDVTQFGFFKLLGKGVLPQNQPFVVKTKLISXXXXXXXXXXXXXVILTA 210
            L SL+ QE KDKA+ + KAP++DVTQFG+FK+LGKGVLPQNQP VVK KLIS             V+LTA
Sbjct:   78 LWSLLPQEAKDKATAD-KAPLLDVTQFGYFKVLGKGVLPQNQPLVVKAKLISKIAEKKIKEAGGAVVLTA 146          
BLAST of GR407119 vs. TrEMBL
Match: C6T3W3_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 2.971e-13
Identity = 41/70 (58.57%), Postives = 50/70 (71.43%), Query Frame = 1
Query:    1 LSSLISQEVKDKASKENKAPVIDVTQFGFFKLLGKGVLPQNQPFVVKTKLISXXXXXXXXXXXXXVILTA 210
            L SL+ QE KDKA+ + KAP++DVTQFG+FK+LGKGVLPQNQP VVK KL+S             V+LTA
Sbjct:   78 LWSLLPQEAKDKATAD-KAPLLDVTQFGYFKVLGKGVLPQNQPLVVKAKLVSKIAEKKIKEAGGAVVLTA 146          
BLAST of GR407119 vs. TrEMBL
Match: B9SPK6_RICCO (60S ribosomal protein L27a, putative OS=Ricinus communis GN=RCOM_0024830 PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 5.068e-13
Identity = 39/70 (55.71%), Postives = 51/70 (72.86%), Query Frame = 1
Query:    1 LSSLISQEVKDKASKENKAPVIDVTQFGFFKLLGKGVLPQNQPFVVKTKLISXXXXXXXXXXXXXVILTA 210
            L S+I ++VKDKA+K+N  P++DVTQFG+FK+LGKGVLP+NQP VVK KL+S             V+LTA
Sbjct:   78 LWSMIPEDVKDKANKDN-VPLLDVTQFGYFKVLGKGVLPENQPIVVKAKLVSKIAEKKIKEAGGAVVLTA 146          
BLAST of GR407119 vs. TrEMBL
Match: A5BE36_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_026450 PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 8.644e-13
Identity = 41/70 (58.57%), Postives = 50/70 (71.43%), Query Frame = 1
Query:    1 LSSLISQEVKDKASKENKAPVIDVTQFGFFKLLGKGVLPQNQPFVVKTKLISXXXXXXXXXXXXXVILTA 210
            L SLI Q+VKDKAS EN AP+IDVTQFG+FK+LGKG LP+++P VVK KL+S             V+LTA
Sbjct:   78 LWSLIPQDVKDKASPEN-APLIDVTQFGYFKVLGKGALPESKPIVVKAKLVSKIAEKKIKEAGGAVVLTA 146          
BLAST of GR407119 vs. TrEMBL
Match: C6T5S2_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.474e-12
Identity = 42/71 (59.15%), Postives = 50/71 (70.42%), Query Frame = 1
Query:    1 LSSLISQEVKDKASK-ENKAPVIDVTQFGFFKLLGKGVLPQNQPFVVKTKLISXXXXXXXXXXXXXVILTA 210
            L SLI Q+ K+KA K ++ AP+IDVTQ G+FK+LGKGVLPQNQPFVVK KLIS             V+LTA
Sbjct:   78 LWSLIPQDAKEKAPKSKDTAPLIDVTQHGYFKVLGKGVLPQNQPFVVKAKLISKIAEKKIKEAGGAVLLTA 148          
BLAST of GR407119 vs. TrEMBL
Match: A5C234_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_026169 PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 2.515e-12
Identity = 39/70 (55.71%), Postives = 49/70 (70.00%), Query Frame = 1
Query:    1 LSSLISQEVKDKASKENKAPVIDVTQFGFFKLLGKGVLPQNQPFVVKTKLISXXXXXXXXXXXXXVILTA 210
            L S++ Q+VKDKAS +N AP+IDVTQFG+FK+LGKG LP +QP VVK KL+S             V+LTA
Sbjct:   78 LWSMVPQDVKDKASPDN-APLIDVTQFGYFKVLGKGALPSSQPIVVKAKLVSKIAEKKIKEAGGAVVLTA 146          
BLAST of GR407119 vs. TAIR peptide
Match: AT1G23290.1 (| Symbols: RPL27A, RPL27AB | Ribosomal protein L18e/L15 superfamily protein | chr1:8263007-8263447 FORWARD LENGTH=146)

HSP 1 Score: 72.4034 bits (176), Expect = 8.670e-14
Identity = 39/70 (55.71%), Postives = 49/70 (70.00%), Query Frame = 1
Query:    1 LSSLISQEVKDKASKENKAPVIDVTQFGFFKLLGKGVLPQNQPFVVKTKLISXXXXXXXXXXXXXVILTA 210
            L SL+ ++VK K+SK+N  P+IDVTQ GFFK+LGKG LP+N+PFVVK KLIS             V+LTA
Sbjct:   78 LWSLVPEDVKAKSSKDN-VPLIDVTQHGFFKVLGKGHLPENKPFVVKAKLISKTAEKKIKEAGGAVVLTA 146          
BLAST of GR407119 vs. TAIR peptide
Match: AT1G70600.1 (| Symbols: | Ribosomal protein L18e/L15 superfamily protein | chr1:26621168-26621608 REVERSE LENGTH=146)

HSP 1 Score: 71.2478 bits (173), Expect = 1.931e-13
Identity = 38/70 (54.29%), Postives = 49/70 (70.00%), Query Frame = 1
Query:    1 LSSLISQEVKDKASKENKAPVIDVTQFGFFKLLGKGVLPQNQPFVVKTKLISXXXXXXXXXXXXXVILTA 210
            L SL+ ++VK K++K+N  P+IDVTQ GFFK+LGKG LP+N+PFVVK KLIS             V+LTA
Sbjct:   78 LWSLVPEDVKAKSTKDN-VPLIDVTQHGFFKVLGKGHLPENKPFVVKAKLISKTAEKKIKEAGGAVVLTA 146          
The following BLAST results are available for this feature:
BLAST of GR407119 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 3
Match NameE-valueIdentityDescription
R27A2_ARATH8.007e-1355.7160S ribosomal protein L27a-2 OS=Arabidopsis thalia... [more]
R27A3_ARATH1.784e-1254.2960S ribosomal protein L27a-3 OS=Arabidopsis thalia... [more]
RL27A_TETTH2.256e-747.8960S ribosomal protein L27a OS=Tetrahymena thermoph... [more]
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BLAST of GR407119 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
B7FMM6_MEDTR8.072e-1971.43Putative uncharacterized protein OS=Medicago trunc... [more]
C6SYJ4_SOYBN1.522e-1768.57Putative uncharacterized protein OS=Glycine max PE... [more]
C6T6T0_SOYBN5.785e-1767.14Putative uncharacterized protein OS=Glycine max PE... [more]
B6VC54_VERFO5.986e-1458.5760S ribosomal protein L27A OS=Vernicia fordii GN=R... [more]
C6SX86_SOYBN2.275e-1360.00Putative uncharacterized protein OS=Glycine max PE... [more]
C6T3W3_SOYBN2.971e-1358.57Putative uncharacterized protein OS=Glycine max PE... [more]
B9SPK6_RICCO5.068e-1355.7160S ribosomal protein L27a, putative OS=Ricinus co... [more]
A5BE36_VITVI8.644e-1358.57Putative uncharacterized protein OS=Vitis vinifera... [more]
C6T5S2_SOYBN1.474e-1259.15Putative uncharacterized protein OS=Glycine max PE... [more]
A5C234_VITVI2.515e-1255.71Putative uncharacterized protein OS=Vitis vinifera... [more]
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BLAST of GR407119 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 2
Match NameE-valueIdentityDescription
AT1G23290.18.670e-1455.71| Symbols: RPL27A, RPL27AB | Ribosomal protein L18... [more]
AT1G70600.11.931e-1354.29| Symbols: | Ribosomal protein L18e/L15 superfami... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001196Ribosomal protein L15, conserved sitePROSITEPS00475RIBOSOMAL_L15coord: 31..63
score
IPR021131Ribosomal protein L18e/L15PFAMPF00828Ribosomal_L18ecoord: 4..68
score: 5.9
IPR021131Ribosomal protein L18e/L15SUPERFAMILY52080Ribosomal proteins L15p and L18ecoord: 7..69
score: 6
NoneNo IPR availableGENE3D3.100.10.10no descriptioncoord: 11..69
score: 2.2
NoneNo IPR availablePANTHERPTHR1172160S RIBOSOMAL PROTEIN L27Acoord: 1..70
score: 2.6
NoneNo IPR availableSEGsegsegcoord: 53..65
score

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GR407119 ID=GR407119; Name=GR407119; organism=Cicer arietinum; type=EST; length=397bp
CTATCTTCTCTCATTTCACAAGAGGTCAAGGATAAAGCTTCAAAAGAGAA
CAAGGCACCTGTTATTGATGTTACTCAGTTTGGTTTCTTCAAACTTTTGG
GTAAAGGTGTTTTGCCTCAGAATCAGCCCTTCGTTGTGAAGACTAAACTC
ATTTCAAAGATCGCTGAGAAGAAAATTAAAGAAGCTGGTGGTGCTGTTAT
CCTTACGGCTTAATTTGTATTATGATATTGATTTTGCTTTCGAACAATTT
AGGGTTTTGATCCCTCTTTAATTTTTGTTTGGACCTTTTACATTAATGCC
ATATTTTTGACTATTTAAGTTTTTTATTTTGGCGCGTTGATCTTGTCAAA
CTAATTCATAGTGGTTAATGATATTGTTATGTCATTCTAAAGTGACC
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular anatomical structure
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: INTERPRO
TermDefinition
IPR001196Ribosomal_L15_CS
IPR021131Ribosomal_uL15/eL18