GR407524

EST Overview
NameGR407524
Unique NameGR407524
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length780
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Homology
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BLAST of GR407524 vs. TrEMBL
Match: D7T8T5_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_11.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00011753001 PE=4 SV=1)

HSP 1 Score: 60.077 bits (144), Expect = 2.498e-7
Identity = 28/37 (75.68%), Postives = 31/37 (83.78%), Query Frame = 3 
Query:  237 AYCGIHKPMDISEADLARKRLIFDEFFYLQVRLLFYI 347
            AY GIH+P D+ EADLARKRLIFDEFFYLQ+  LF I
Sbjct:  456 AYVGIHQPKDLKEADLARKRLIFDEFFYLQLGRLFQI 492
[Close]
BLAST of GR407524 vs. TAIR peptide
Match: AT2G01440.1 (| Symbols: | DEAD/DEAH box RNA helicase family protein | chr2:193950-199056 REVERSE LENGTH=973)

HSP 1 Score: 55.4546 bits (132), Expect = 3.991e-8
Identity = 25/35 (71.43%), Postives = 29/35 (82.86%), Query Frame = 3 
Query:  237 AYCGIHKPMDISEADLARKRLIFDEFFYLQVRLLF 341
            AY GIH+P  + EADLARKRLIFDEFFYLQ+  L+
Sbjct:  441 AYVGIHEPKTLDEADLARKRLIFDEFFYLQLARLY 475
The following BLAST results are available for this feature:
BLAST of GR407524 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 1
Match NameE-valueIdentityDescription
D7T8T5_VITVI2.498e-775.68Whole genome shotgun sequence of line PN40024, sca... [more]
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BLAST of GR407524 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT2G01440.13.991e-871.43| Symbols: | DEAD/DEAH box RNA helicase family pr... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 24..43
score

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GR407524 ID=GR407524; Name=GR407524; organism=Cicer arietinum; type=EST; length=780bp
TTTTTTTTCCTTTCTATTTATTTTTTATTTGCAACGAAATGCGTTGTTTT
TCTTGTAACAAGCTGAAAGCTTTAGTTTGAGGGGGACATTAGAAAATCTG
GGAAATATCTCATAATATCTTTTTTTATATCTTGCACTATTTTAGAGTTT
CCCAGATGATTTGCCTGAATCTTTACTGTCATCTTCTCCTGCATACTTTA
ACCAAAACTTTAAATTCTTTAGTGTTGACAATACAGGCATATTGTGGAAT
TCACAAACCTATGGATATAAGTGAAGCTGATTTGGCCCGTAAGCGACTTA
TATTTGATGAATTTTTTTACCTTCAGGTGAGGTTATTGTTTTATATCACG
TTTTGTTTGCTCTATCATCTGTGGACATTTCTAAACTCTTATATATAGTC
ATTTCTTCAATTTTCTTTTTAAAGTTACTGATGACCATTGTTTTTGGTAT
CAGTTGTTTCCTTTCAAATCTTATAACGGTGTATTAAATATTCTATTATT
TTATTTCTTCTAGAGCTTTACATGCTTTGCCAGTCAATGTTGATCCAATT
CCTAAAGATATCAGAGAGGAATTTGGACTCTTAAGTCTTCATGATGTAAG
TATCTCTTATTGAACTGTTTATTCTATTGATGAAGCCTGCCTGCCATATG
AAACCTGACCATTGCCACATACTTGACTATAAATTTTAATCATTCTGTGT
GATATACATCAATAATTGTTGAGAATGAGAGAGAAAACAAGCACAAAAAC
GAGTATTCTTAAAGTGACCATGCCATAAAA
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