HO062969

EST Overview
NameHO062969
Unique NameHO062969
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length377
Libraries
Library NameType
LIBEST_026409 Chickpea drought stressed cDNA SSH library AB2cdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Homology
[Close]
BLAST of HO062969 vs. TrEMBL
Match: C6T3G6_SOYBN (Putative uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 9.531e-12
Identity = 38/63 (60.32%), Postives = 46/63 (73.02%), Query Frame = 1 
Query:   70 MVGKKRSWFLKRLRKESLRWKFLWPXXXXXXFKWNRL-TLPVSFLDNVVFKVVSAFEAVVLVL 255
            MV KKRSW  KRL++ESLRWK+L        FKW RL +LPVSF +NV FK++S FEA+ LVL
Sbjct:    1 MVEKKRSWLSKRLKRESLRWKYL-----GAAFKWKRLSSLPVSFFNNVAFKILSLFEAIFLVL 58
The following BLAST results are available for this feature:
BLAST of HO062969 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 1
Match NameE-valueIdentityDescription
C6T3G6_SOYBN9.531e-1260.32Putative uncharacterized protein OS=Glycine max PE... [more]
back to top
InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 33..38
score
NoneNo IPR availableSEGsegsegcoord: 7..13
score: NAcoord: 29..44
score
NoneNo IPR availableSEGsegsegcoord: 25..43
score
NoneNo IPR availableSEGsegsegcoord: 37..42
score

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>HO062969 ID=HO062969; Name=HO062969; organism=Cicer arietinum; type=EST; length=377bp
CGAGGGGCCGCCCGGGCAGGTACCCGGGGATTAATTCAATTTAATTGAGG
AATAAAGGGAACAGAACCAATGGTTGGCAAGAAGAGATCATGGTTTTTGA
AGAGACTTCGGAAGGAATCGTTGAGGTGGAAATTTCTATGGCCATCATCA
TCGTCATCATCATTCAAGTGGAACAGGCTTACTTTGCCTGTTTCGTTCTT
GGACAATGTTGTTTTTAAGGTTGTCTCTGCCTTTGAGGCTGTTGTACTTG
TTCTCGCACTATGTTTTTTTTACCTTTGTTGTGGTTGCAGTTTCTGATGC
TAATTACTATGTAACTAATCCTTCTTCTAACTTCCTACTACTCATTCAAT
CCAAGCTTTTTAGCTTTTGTTTTTTCC
back to top