ES560296

EST Overview
NameES560296
Unique NameES560296
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length356
Libraries
Library NameType
LIBEST_021248 Ascochyta rabiei induced librarycdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
KEGG analysis for Cicer arietinum unigene v12011-01-05
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Homology
BLAST of ES560296 vs. TrEMBL
Match: Q2UY13_LOTJA (Nucleoporin OS=Lotus japonicus GN=Nup133 PE=2 SV=1)

HSP 1 Score: 208.764 bits (530), Expect = 1.498e-52
Identity = 102/115 (88.70%), Postives = 107/115 (93.04%), Query Frame = -3
Query:   10 PRSLTWRFPHHSTKESNRQFLVLTDCEI*CFRVEFSSDMHVSRLWSQEVVGTDAELGIKKDLAGQKGIWPLDVQVDDHGKVITILVATFCKDRISSSSYMQYSLLTMQYKSGMNV 354
            PRSLTW FPHHSTKESNRQFLVLTD EI CF VEFSSD+HVS LWSQ +VGTD ELGIKKDLAGQKGIWPLDVQVDD+GKVITIL ATFCKDRISSSSYMQYSLLTMQYKSG++V
Sbjct:  308 PRSLTWCFPHHSTKESNRQFLVLTDHEIKCFGVEFSSDIHVSMLWSQVIVGTDPELGIKKDLAGQKGIWPLDVQVDDYGKVITILFATFCKDRISSSSYMQYSLLTMQYKSGLDV 422          
BLAST of ES560296 vs. TrEMBL
Match: D7TD44_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_57.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00030051001 PE=4 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 6.738e-45
Identity = 87/118 (73.73%), Postives = 101/118 (85.59%), Query Frame = -3
Query:    1 PRSLTWRFPHHSTKESNRQFLVLTDCEI*CFRVEFSSDMHVSRLWSQEVVGTDAELGIKKDLAGQKGIWPLDVQVDDHGKVITILVATFCKDRISSSSYMQYSLLTMQYKSGMNVVES 354
            P+SLTW     S ++SNRQF +LTD EI CFRV FS D++V++LWS E++GTD +LGIKKDLAGQK IWPLDVQVD HGKVITILVATFCKDR+SSSSY QYSLLTMQYKSG+N+ ES
Sbjct:  248 PKSLTWHHSSFSLEKSNRQFFLLTDNEIQCFRVNFSPDLNVTKLWSHEIIGTDGDLGIKKDLAGQKRIWPLDVQVDAHGKVITILVATFCKDRVSSSSYTQYSLLTMQYKSGINISES 365          
BLAST of ES560296 vs. TrEMBL
Match: B9T0B9_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0483230 PE=4 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 4.677e-38
Identity = 74/114 (64.91%), Postives = 93/114 (81.58%), Query Frame = -3
Query:   10 RSLTWRFPHHSTKESNRQFLVLTDCEI*CFRVEFSSDMHVSRLWSQEVVGTDAELGIKKDLAGQKGIWPLDVQVDDHGKVITILVATFCKDRISSSSYMQYSLLTMQYKSGMNV 351
            RSL W    HS +++NR+FL+LTD EI CF + F  D++VS+LWS E+VG D + GIKKDLAGQK IWPLD+QVDD GKVIT+LVA+FCKDR+S SSY+QYSLLTMQYK  +++
Sbjct:  389 RSLIWHSSLHSVEDTNRKFLMLTDHEIQCFTITFRPDLNVSKLWSHEIVGNDGDSGIKKDLAGQKRIWPLDLQVDDQGKVITVLVASFCKDRVSGSSYIQYSLLTMQYKYSVSI 502          
BLAST of ES560296 vs. TrEMBL
Match: Q9SJ43_ARATH (Putative uncharacterized protein At2g05120 OS=Arabidopsis thaliana GN=At2g05120 PE=2 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 4.840e-35
Identity = 72/117 (61.54%), Postives = 87/117 (74.36%), Query Frame = -3
Query:    4 PRSLTWRFPHHSTKESNRQFLVLTDCEI*CFRVEFSSDMHVSRLWSQEVVGTDAELGIKKDLAGQKGIWPLDVQVDDHGKVITILVATFCKDRISSSSYMQYSLLTMQYKSGMNVVE 354
            PRSL WRF     +ES  +FL+LTDC+I CF +E   D+ VS +W  E+VGTD + GIKKD+A QK IWPLD+QVDD GKVIT+LVAT C DR SSSSY QYSLLT+Q+KS M   +
Sbjct:  290 PRSLIWRFSQGLARESCWEFLMLTDCDIHCFTIEPYPDLTVSEVWQHEIVGTDGDSGIKKDIASQKQIWPLDLQVDDQGKVITVLVATICMDRASSSSYTQYSLLTLQHKSEMRFAD 406          
BLAST of ES560296 vs. TrEMBL
Match: D6PP54_9BRAS (AT2G05120-like protein (Fragment) OS=Neslia paniculata PE=4 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 2.402e-34
Identity = 70/117 (59.83%), Postives = 87/117 (74.36%), Query Frame = -3
Query:    4 PRSLTWRFPHHSTKESNRQFLVLTDCEI*CFRVEFSSDMHVSRLWSQEVVGTDAELGIKKDLAGQKGIWPLDVQVDDHGKVITILVATFCKDRISSSSYMQYSLLTMQYKSGMNVVE 354
            PRSL WRF     +ES  QF +LTDC+I CF +E   D+ VS++W  E+VGTD + GIKKD+A QK IWPLD+QVD+ GK+IT+LVAT C DR SSSSY QYSLLT+Q+KS M   +
Sbjct:   50 PRSLIWRFSQGLARESCWQFFMLTDCDIHCFTIEPYPDLTVSKVWQHEIVGTDGDSGIKKDIASQKQIWPLDLQVDEQGKLITVLVATICMDRASSSSYTQYSLLTLQHKSEMRFAD 166          
BLAST of ES560296 vs. TrEMBL
Match: D6PP53_9BRAS (AT2G05120-like protein (Fragment) OS=Capsella grandiflora PE=4 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 5.351e-34
Identity = 71/117 (60.68%), Postives = 85/117 (72.65%), Query Frame = -3
Query:    4 PRSLTWRFPHHSTKESNRQFLVLTDCEI*CFRVEFSSDMHVSRLWSQEVVGTDAELGIKKDLAGQKGIWPLDVQVDDHGKVITILVATFCKDRISSSSYMQYSLLTMQYKSGMNVVE 354
            PRSL WRF     +ES  QF +LTDC+I CF VE    + VS++W  E+VG D + GIKKD+A QK IWPLD+QVDD GKVIT+LVAT C DR SSSSY QYSLLT+Q+KS M   +
Sbjct:   50 PRSLIWRFSQGIARESCWQFFMLTDCDIHCFNVEPYPGLTVSKVWQHEIVGADGDSGIKKDIASQKQIWPLDLQVDDQGKVITVLVATICMDRASSSSYTQYSLLTLQHKSEMRFAD 166          
BLAST of ES560296 vs. TrEMBL
Match: D6PP50_9BRAS (AT2G05120-like protein (Fragment) OS=Capsella grandiflora PE=4 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 5.351e-34
Identity = 71/117 (60.68%), Postives = 85/117 (72.65%), Query Frame = -3
Query:    4 PRSLTWRFPHHSTKESNRQFLVLTDCEI*CFRVEFSSDMHVSRLWSQEVVGTDAELGIKKDLAGQKGIWPLDVQVDDHGKVITILVATFCKDRISSSSYMQYSLLTMQYKSGMNVVE 354
            PRSL WRF     +ES  QF +LTDC+I CF VE    + VS++W  E+VG D + GIKKD+A QK IWPLD+QVDD GKVIT+LVAT C DR SSSSY QYSLLT+Q+KS M   +
Sbjct:   50 PRSLIWRFSQGIARESCWQFFMLTDCDIHCFNVEPYPGLTVSKVWQHEIVGADGDSGIKKDIASQKQIWPLDLQVDDQGKVITVLVATICMDRASSSSYTQYSLLTLQHKSEMRFAD 166          
BLAST of ES560296 vs. TrEMBL
Match: D6PP51_9BRAS (AT2G05120-like protein (Fragment) OS=Capsella grandiflora PE=4 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 9.128e-34
Identity = 69/117 (58.97%), Postives = 85/117 (72.65%), Query Frame = -3
Query:    4 PRSLTWRFPHHSTKESNRQFLVLTDCEI*CFRVEFSSDMHVSRLWSQEVVGTDAELGIKKDLAGQKGIWPLDVQVDDHGKVITILVATFCKDRISSSSYMQYSLLTMQYKSGMNVVE 354
            PRSL WRF     +ES  QF +LTDC+I CF +E    + VS++W  E++G D + GIKKD+A QK IWPLD+QVDD GKVIT+LVAT C DR SSSSY QYSLLT+Q+KS M   +
Sbjct:   50 PRSLIWRFSQGLARESCWQFFMLTDCDIHCFNIEPYPGLTVSKVWQHEIIGADGDSGIKKDIASQKQIWPLDLQVDDQGKVITVLVATICMDRASSSSYTQYSLLTLQHKSEMRFAD 166          
BLAST of ES560296 vs. TrEMBL
Match: D6PP49_9BRAS (AT2G05120-like protein (Fragment) OS=Capsella grandiflora PE=4 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 2.656e-33
Identity = 69/117 (58.97%), Postives = 84/117 (71.79%), Query Frame = -3
Query:    4 PRSLTWRFPHHSTKESNRQFLVLTDCEI*CFRVEFSSDMHVSRLWSQEVVGTDAELGIKKDLAGQKGIWPLDVQVDDHGKVITILVATFCKDRISSSSYMQYSLLTMQYKSGMNVVE 354
            PRSL WRF     +ES  QF +LTDC+I CF +E    + VS++W  E+ G D + GIKKD+A QK IWPLD+QVDD GKVIT+LVAT C DR SSSSY QYSLLT+Q+KS M   +
Sbjct:   50 PRSLIWRFSQGLARESCWQFFMLTDCDIHCFNIEPYPGLTVSKVWQHEIXGADGDSGIKKDIASQKQIWPLDLQVDDQGKVITVLVATICMDRASSSSYTQYSLLTLQHKSEMRFAD 166          
BLAST of ES560296 vs. TrEMBL
Match: D7L8M4_ARALY (Transporter OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_480129 PE=4 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 2.248e-32
Identity = 70/117 (59.83%), Postives = 85/117 (72.65%), Query Frame = -3
Query:    4 PRSLTWRFPHHSTKESNRQFLVLTDCEI*CFRVEFSSDMHVSRLWSQEVVGTDAELGIKKDLAGQKGIWPLDVQVDDHGKVITILVATFCKDRISSSSYMQYSLLTMQYKSGMNVVE 354
            PRSL WRF     +ES  +F +LTDC+I CF +E   D+ VS++W  E+VGTD + GIKKD+A QK IWPLD+QV D GKVIT+LVAT C DR SSSSY QYSLLT+Q KS M   +
Sbjct:  284 PRSLIWRFSQGLARESCWEFFMLTDCDIHCFTIEPYPDLTVSKVWQHEIVGTDGDSGIKKDIASQKQIWPLDLQV-DQGKVITVLVATICMDRASSSSYTQYSLLTLQQKSEMRFAD 399          
BLAST of ES560296 vs. TAIR peptide
Match: AT2G05120.2 (| Symbols: | Nucleoporin, Nup133/Nup155-like | chr2:1842069-1846858 REVERSE LENGTH=1220)

HSP 1 Score: 150.599 bits (379), Expect = 1.817e-37
Identity = 72/117 (61.54%), Postives = 87/117 (74.36%), Query Frame = -3
Query:    4 PRSLTWRFPHHSTKESNRQFLVLTDCEI*CFRVEFSSDMHVSRLWSQEVVGTDAELGIKKDLAGQKGIWPLDVQVDDHGKVITILVATFCKDRISSSSYMQYSLLTMQYKSGMNVVE 354
            PRSL WRF     +ES  +FL+LTDC+I CF +E   D+ VS +W  E+VGTD + GIKKD+A QK IWPLD+QVDD GKVIT+LVAT C DR SSSSY QYSLLT+Q+KS M   +
Sbjct:  276 PRSLIWRFSQGLARESCWEFLMLTDCDIHCFTIEPYPDLTVSEVWQHEIVGTDGDSGIKKDIASQKQIWPLDLQVDDQGKVITVLVATICMDRASSSSYTQYSLLTLQHKSEMRFAD 392          
BLAST of ES560296 vs. TAIR peptide
Match: AT2G05120.1 (| Symbols: | Nucleoporin, Nup133/Nup155-like | chr2:1842069-1846858 REVERSE LENGTH=1285)

HSP 1 Score: 150.599 bits (379), Expect = 1.817e-37
Identity = 72/117 (61.54%), Postives = 87/117 (74.36%), Query Frame = -3
Query:    4 PRSLTWRFPHHSTKESNRQFLVLTDCEI*CFRVEFSSDMHVSRLWSQEVVGTDAELGIKKDLAGQKGIWPLDVQVDDHGKVITILVATFCKDRISSSSYMQYSLLTMQYKSGMNVVE 354
            PRSL WRF     +ES  +FL+LTDC+I CF +E   D+ VS +W  E+VGTD + GIKKD+A QK IWPLD+QVDD GKVIT+LVAT C DR SSSSY QYSLLT+Q+KS M   +
Sbjct:  290 PRSLIWRFSQGLARESCWEFLMLTDCDIHCFTIEPYPDLTVSEVWQHEIVGTDGDSGIKKDIASQKQIWPLDLQVDDQGKVITVLVATICMDRASSSSYTQYSLLTLQHKSEMRFAD 406          
The following BLAST results are available for this feature:
BLAST of ES560296 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
Q2UY13_LOTJA1.498e-5288.70Nucleoporin OS=Lotus japonicus GN=Nup133 PE=2 SV=1[more]
D7TD44_VITVI6.738e-4573.73Whole genome shotgun sequence of line PN40024, sca... [more]
B9T0B9_RICCO4.677e-3864.91Putative uncharacterized protein OS=Ricinus commun... [more]
Q9SJ43_ARATH4.840e-3561.54Putative uncharacterized protein At2g05120 OS=Arab... [more]
D6PP54_9BRAS2.402e-3459.83AT2G05120-like protein (Fragment) OS=Neslia panicu... [more]
D6PP53_9BRAS5.351e-3460.68AT2G05120-like protein (Fragment) OS=Capsella gran... [more]
D6PP50_9BRAS5.351e-3460.68AT2G05120-like protein (Fragment) OS=Capsella gran... [more]
D6PP51_9BRAS9.128e-3458.97AT2G05120-like protein (Fragment) OS=Capsella gran... [more]
D6PP49_9BRAS2.656e-3358.97AT2G05120-like protein (Fragment) OS=Capsella gran... [more]
D7L8M4_ARALY2.248e-3259.83Transporter OS=Arabidopsis lyrata subsp. lyrata GN... [more]
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BLAST of ES560296 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 2
Match NameE-valueIdentityDescription
AT2G05120.21.817e-3761.54| Symbols: | Nucleoporin, Nup133/Nup155-like | ch... [more]
AT2G05120.11.817e-3761.54| Symbols: | Nucleoporin, Nup133/Nup155-like | ch... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014908Nucleoporin, Nup133/Nup155-like, N-terminalPFAMPF08801Nucleoporin_Ncoord: 1..81
score: 8.9
IPR015943WD40/YVTN repeat-like-containing domainGENE3D2.130.10.10no descriptioncoord: 12..82
score: 5.2
NoneNo IPR availablePANTHERPTHR13405FAMILY NOT NAMEDcoord: 1..84
score: 1.6
NoneNo IPR availablePANTHERPTHR13405:SF4gb def: Hypothetical protein At2g05120coord: 1..84
score: 1.6

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>ES560296 ID=ES560296; Name=ES560296; organism=Cicer arietinum; type=EST; length=356bp
ACTCTCGACCACATTCATTCCTGACTTATATTGCATGGTTAGAAGAGAAT
ATTGCATGTAGCTTGAACTGCTAATCCTATCTTTACAAAAGGTTGCAACA
AGAATGGTGATCACTTTACCATGATCATCTACCTGCACATCAAGAGGCCA
GATTCCCTTTTGACCTGCCAAATCCTTCTTAATGCCAAGCTCAGCATCTG
TTCCAACGACTTCCTGAGACCAAAGCCTTGAAACATGCATATCAGAACTA
AACTCTACTCTGAAACACTATATCTCACAGTCTGTCAATACCAAAAACTG
CCGATTTGATTCCTTAGTAGAATGATGTGGAAAACGCCATGTCAGCGACC
TCGGGT
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR014908Nucleoporin_Nup133/Nup155_N
IPR015943WD40/YVTN_repeat-like_dom_sf