FE673162
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FE673162 vs. SwissProt
Match: DHX8_ARATH (Probable pre-mRNA-splicing factor ATP-dependent RNA helicase OS=Arabidopsis thaliana GN=At3g26560 PE=1 SV=2) HSP 1 Score: 313.923 bits (803), Expect = 4.568e-85 Identity = 158/210 (75.24%), Postives = 175/210 (83.33%), Query Frame = -2 Query: 10 SKDGPVARTGLSGIRIVEEDDVGSSRRPLKRMSSPERWEAKQMIASGVLSVSEYPTYDEEGDGVMYQXXXXXXXXXXXXXXXEPAFLQGQSRYSMDMSPVKIFKNPEGSLGRAAALQSALIKXXXXXXXXXXRTMLDSIPKDLNRPWEDPMPESGERHLAQELRGVGLSAYDMPEWKKDAYGKTITFGQRSKLSIQEQRQSLPIHKLKKK 639 +KDG V +TG+SGIRIVEE+DV SRRPLK+MSSPERWEAKQ+IASGVL V E+P YDE+GDG++YQ EPAFLQGQ+RYS+DMSPVKIFKNPEGSL RAAALQSAL K RTMLDSIPKDLNRPWEDPMPE+GERHLAQELRGVGLSAYDMPEWKKDA+GKT TFGQRSKLSIQEQR+SLPI+KLKK+ Sbjct: 314 TKDGQVTKTGISGIRIVEENDVAPSRRPLKKMSSPERWEAKQLIASGVLRVDEFPMYDEDGDGMLYQEEGAEEELEIEMNEDEPAFLQGQTRYSVDMSPVKIFKNPEGSLSRAAALQSALTKERREMREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAYDMPEWKKDAFGKTPTFGQRSKLSIQEQRESLPIYKLKKE 523
BLAST of FE673162 vs. SwissProt
Match: DHX8_MOUSE (ATP-dependent RNA helicase DHX8 OS=Mus musculus GN=Dhx8 PE=2 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 2.373e-41 Identity = 90/213 (42.25%), Postives = 129/213 (60.56%), Query Frame = -2 Query: 10 QDSKDGPVARTGLSGIRIVEEDDVGSSRRPLKRMSSPERWEAKQMIASGVLSVSEYPTYDEEGDGVMYQXXXXXXXXXXXXXXXEPAFLQGQSRYSMDMSPVKIFKNPEGSLGRAAALQSALIKXXXXXXXXXXRTMLDSIPKDLNRPWEDPMPESGERHLAQELRGVGLSAYDMPEWKKDAY-GKTITFGQRSKLSIQEQRQSLPIHKLKKK 645 + S P T LS + E +D R+ L R+S PE+WE KQMIA+ VLS E+P +DEE + EP FL+G ++ SMDMSP+KI KNP+GSL +AA +QSAL K +DSIP LN+ W DP+P++ R +A +RG+G+ D+PEWKK A+ G ++G+++++SI EQR+SLPI+KLK++ Sbjct: 385 ETSMRNPDRPTHLSLVSAPEVEDDSLERKRLTRISDPEKWEIKQMIAANVLSKEEFPDFDEETGILPKVDDEEDEDLEIELVEEEPPFLRGHTKQSMDMSPIKIVKNPDGSLSQAAMMQSALAKERRELKQAQREAEMDSIPMGLNKHWVDPLPDAEGRQIAANMRGIGMMPNDIPEWKKHAFGGNKASYGKKTQMSILEQRESLPIYKLKEQ 597
BLAST of FE673162 vs. SwissProt
Match: DHX8_HUMAN (ATP-dependent RNA helicase DHX8 OS=Homo sapiens GN=DHX8 PE=1 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 2.373e-41 Identity = 90/213 (42.25%), Postives = 129/213 (60.56%), Query Frame = -2 Query: 10 QDSKDGPVARTGLSGIRIVEEDDVGSSRRPLKRMSSPERWEAKQMIASGVLSVSEYPTYDEEGDGVMYQXXXXXXXXXXXXXXXEPAFLQGQSRYSMDMSPVKIFKNPEGSLGRAAALQSALIKXXXXXXXXXXRTMLDSIPKDLNRPWEDPMPESGERHLAQELRGVGLSAYDMPEWKKDAY-GKTITFGQRSKLSIQEQRQSLPIHKLKKK 645 + S P T LS + E +D R+ L R+S PE+WE KQMIA+ VLS E+P +DEE + EP FL+G ++ SMDMSP+KI KNP+GSL +AA +QSAL K +DSIP LN+ W DP+P++ R +A +RG+G+ D+PEWKK A+ G ++G+++++SI EQR+SLPI+KLK++ Sbjct: 361 ETSMRNPDRPTHLSLVSAPEVEDDSLERKRLTRISDPEKWEIKQMIAANVLSKEEFPDFDEETGILPKVDDEEDEDLEIELVEEEPPFLRGHTKQSMDMSPIKIVKNPDGSLSQAAMMQSALAKERRELKQAQREAEMDSIPMGLNKHWVDPLPDAEGRQIAANMRGIGMMPNDIPEWKKHAFGGNKASYGKKTQMSILEQRESLPIYKLKEQ 573
BLAST of FE673162 vs. SwissProt
Match: DHX8_DICDI (ATP-dependent RNA helicase dhx8 OS=Dictyostelium discoideum GN=dhx8 PE=3 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 1.701e-39 Identity = 87/194 (44.85%), Postives = 117/194 (60.31%), Query Frame = -2 Query: 13 EEDDVGSSRRPLKRMSSPERWEAKQMIASGVLSVSEYPTYDEEGDGVMYQXXXXXXXXXXXXXXXEPAFLQGQSRYSMDMSPVKIFKNPEGSLGRAAALQSALIKXXXXXXXXXXRTMLDSIPKDLNRPWEDPMPESGERHLAQELRGVGLSAYD--MPEWKKDAYGKTITFGQRSKLSIQEQRQSLPIHKLKK 588 ++DD ++ + KR++SP+RW KQ+IASG+LSV E P YD+E V + EP FL+G +SP+KI K P GSL RAA+ Q+AL K M+DSIPKDL+ PW DPMPE+GERHLAQE+R + D +PEWKK G I +G+ + SI+EQR+SLPI L++ Sbjct: 322 DDDDKYTTSKNRKRIASPDRWGYKQLIASGILSVPEMPNYDKEVGLVNHDEEQPEEDFDIERNEDEPQFLKGTRMNMQQLSPIKIVKKPNGSLQRAASTQTALSKERKEEKNQQRNEMMDSIPKDLSLPWHDPMPEAGERHLAQEIRSIAGQGIDTEIPEWKKVTQGSHIQYGKATSRSIKEQRESLPIFPLRE 515
BLAST of FE673162 vs. SwissProt
Match: MOG5_CAEEL (Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-5 OS=Caenorhabditis elegans GN=mog-5 PE=2 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 5.688e-19 Identity = 67/185 (36.22%), Postives = 93/185 (50.27%), Query Frame = -2 Query: 13 RMSSPERWEAKQMIASGVLSVSEYPTYDEEGDGVM--YQXXXXXXXXXXXXXXXEPAFLQGQSRYSMDMSPVKIFKNPEGSLGRAAALQSALIKXXXXXXXXXXRTMLDSIPKDLNRPWEDPMPESGERHL---AQELRGVGLSAYDMPEWKKD-AYGKTITFGQRSKLSIQEQRQSLPIHKLKK 549 R+S+PERWE +QM +GVL+ ++ P +DEE GV+ Y EP FL+G + ++ PVK+ KNP+GSL +AA +Q AL K R K + P SG + A E + +MPEW K G T+G+R+ LS+ EQR+SLPI LKK Sbjct: 364 RISTPERWELRQMQGAGVLTATDMPDFDEEM-GVLRNYDDESDGEDIEIELVEDEPDFLRGYGKGGAEIEPVKVVKNPDGSLAQAALMQGALSKERKETKIQAQRERDMDTQKGFSSNARILDPMSGNQSTAWSADESKDRNNKMKEMPEWLKHVTAGGKATYGRRTNLSMVEQRESLPIFALKK 547
BLAST of FE673162 vs. SwissProt
Match: PRP22_SCHPO (Pre-mRNA-splicing factor ATP-dependent RNA helicase prp22 OS=Schizosaccharomyces pombe GN=prp22 PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 7.429e-19 Identity = 56/188 (29.79%), Postives = 99/188 (52.66%), Query Frame = -2 Query: 10 KRMSSPERWEAKQMIASGVLSVSEYPTYDE--EGDGVMYQXXXXXXXXXXXXXXXEPAFLQGQSRYSMDMSPVKIFKNPEGSLGRAAALQSALI---KXXXXXXXXXXRTMLDSIPKDLNRPWEDPMPESGERHLAQELRGVGLS--AYDMPEWKKDAYGKTITFGQRSKLSIQEQRQSLPIHKLKKK 552 KR++SPE WE +Q+ ASG +S ++ P ++ + EP FL GQ++ S+ +SP+K+ K P+GSL R AA+Q ++ + ++ + +DL+ W+D M +R AQ++R + P W++ I++G+R+ LS++EQR+ LP+ KL+K+ Sbjct: 332 KRLTSPEIWELQQLAASGAISATDIPELNDGFNTNNAAEINPEDDEDVEIELREEEPGFLAGQTKVSLKLSPIKVVKAPDGSLSR-AAMQGQILANDRREIRQKEAKLKSEQEMEKQDLSLSWQDTMSNPQDRKFAQDVRDSAARQLTSETPSWRQATRNANISYGKRTTLSMKEQREGLPVFKLRKQ 518
BLAST of FE673162 vs. TrEMBL
Match: B9R8Y0_RICCO (ATP-dependent RNA helicase, putative OS=Ricinus communis GN=RCOM_1602810 PE=4 SV=1) HSP 1 Score: 325.094 bits (832), Expect = 2.877e-87 Identity = 164/213 (77.00%), Postives = 177/213 (83.10%), Query Frame = -2 Query: 10 PQDSKDGPVARTGLSGIRIVEEDDVGSSRRPLKRMSSPERWEAKQMIASGVLSVSEYPTYDEEGDGVMYQXXXXXXXXXXXXXXXEPAFLQGQSRYSMDMSPVKIFKNPEGSLGRAAALQSALIKXXXXXXXXXXRTMLDSIPKDLNRPWEDPMPESGERHLAQELRGVGLSAYDMPEWKKDAYGKTITFGQRSKLSIQEQRQSLPIHKLKKK 648 P SK+GPV RTGLSGIRI+EEDD SRRPLKRMSSPERWEAKQ+IASGVL V EYP YD+EGDG++YQ EPAFLQGQ+RYS+DMSPVKIFKNPEGSL RAAALQSALIK RTMLDSIPKDLNRPWEDPMPE+GERHLAQELRGVGLSAYDMPEWKKDA+GK +TFGQRSKLSIQEQRQSLPI+KLKK+ Sbjct: 320 PSGSKEGPVTRTGLSGIRILEEDDAVPSRRPLKRMSSPERWEAKQLIASGVLGVQEYPMYDDEGDGLLYQEGGAEEELEIELNEDEPAFLQGQTRYSVDMSPVKIFKNPEGSLSRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAYDMPEWKKDAFGKALTFGQRSKLSIQEQRQSLPIYKLKKE 532
BLAST of FE673162 vs. TrEMBL
Match: B9N9A7_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_586590 PE=4 SV=1) HSP 1 Score: 322.398 bits (825), Expect = 1.865e-86 Identity = 163/210 (77.62%), Postives = 177/210 (84.29%), Query Frame = -2 Query: 10 SKDGPVARTGLSGIRIVEEDDVGSSRRPLKRMSSPERWEAKQMIASGVLSVSEYPTYDEEGDGVMYQXXXXXXXXXXXXXXXEPAFLQGQSRYSMDMSPVKIFKNPEGSLGRAAALQSALIKXXXXXXXXXXRTMLDSIPKDLNRPWEDPMPESGERHLAQELRGVGLSAYDMPEWKKDAYGKTITFGQRSKLSIQEQRQSLPIHKLKKK 639 SK+GPV RTGLSGIRIVEE+D G SRRPLKRMSSPE+WEAKQ+IASGVLSV EYP YDEE DG++YQ EPAFLQGQ+RYS+DMSPVKIFKNPEGSL RAAALQSALIK RTMLDSIPKDLNRPWEDPMPE+GERHLAQELRGVGLSAYDMPEWKKDA+GK +T+GQRSKLSIQEQRQSLPI+KLKK+ Sbjct: 317 SKEGPVTRTGLSGIRIVEEEDTGPSRRPLKRMSSPEKWEAKQLIASGVLSVQEYPMYDEEIDGLLYQEEGVEEELEIEMNEDEPAFLQGQTRYSVDMSPVKIFKNPEGSLSRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAYDMPEWKKDAFGKALTYGQRSKLSIQEQRQSLPIYKLKKE 526
BLAST of FE673162 vs. TrEMBL
Match: A5AQH3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_005515 PE=4 SV=1) HSP 1 Score: 320.472 bits (820), Expect = 7.085e-86 Identity = 161/213 (75.59%), Postives = 175/213 (82.16%), Query Frame = -2 Query: 10 PQDSKDGPVARTGLSGIRIVEEDDVGSSRRPLKRMSSPERWEAKQMIASGVLSVSEYPTYDEEGDGVMYQXXXXXXXXXXXXXXXEPAFLQGQSRYSMDMSPVKIFKNPEGSLGRAAALQSALIKXXXXXXXXXXRTMLDSIPKDLNRPWEDPMPESGERHLAQELRGVGLSAYDMPEWKKDAYGKTITFGQRSKLSIQEQRQSLPIHKLKKK 648 P GPV+RTGLSGIRIVEE+D SRRPLKRMSSPE+WEAKQ+IASGVL + E+P YD+EGDG++YQ EPAFLQGQSRYSMDMSPVKIFKNPEGSL RAAALQSALIK RTMLDSIPKDLNRPWEDPMPE+GERHLAQELRGVGLSAYDMPEWKKDA+GK +TFGQRSKLSIQEQRQSLPI+KLKK+ Sbjct: 327 PSGXNQGPVSRTGLSGIRIVEENDAAPSRRPLKRMSSPEKWEAKQLIASGVLDIREFPMYDDEGDGMLYQEEGAEEELEIEMNEDEPAFLQGQSRYSMDMSPVKIFKNPEGSLSRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAYDMPEWKKDAFGKALTFGQRSKLSIQEQRQSLPIYKLKKE 539
BLAST of FE673162 vs. TrEMBL
Match: B9NFQ6_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_790081 PE=4 SV=1) HSP 1 Score: 313.923 bits (803), Expect = 6.632e-84 Identity = 161/211 (76.30%), Postives = 176/211 (83.41%), Query Frame = -2 Query: 10 SKDGPVARTGLSGIRIVEED-DVGSSRRPLKRMSSPERWEAKQMIASGVLSVSEYPTYDEEGDGVMYQXXXXXXXXXXXXXXXEPAFLQGQSRYSMDMSPVKIFKNPEGSLGRAAALQSALIKXXXXXXXXXXRTMLDSIPKDLNRPWEDPMPESGERHLAQELRGVGLSAYDMPEWKKDAYGKTITFGQRSKLSIQEQRQSLPIHKLKKK 639 SK+GPV RTGLSGIRIVEE+ D G SRRPLKRMSSPE+WEAKQ+IASGVLSV E+P YD+E DG +YQ EPAFLQGQ+RYS+D+SPVKIFKNPEGSL RAAALQSALIK RTMLDSIPKDLNRPWEDPMPE+GERHLAQELRGVGLSAYDMPEWKKDA+GK +TFGQRSKLSIQEQRQSLPI+KLKK+ Sbjct: 32 SKEGPVTRTGLSGIRIVEEEEDTGPSRRPLKRMSSPEKWEAKQLIASGVLSVQEHPMYDDEVDGFLYQEEGVEEELEIEMNEDEPAFLQGQTRYSVDVSPVKIFKNPEGSLSRAAALQSALIKERREVRDQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAYDMPEWKKDAFGKALTFGQRSKLSIQEQRQSLPIYKLKKE 242
BLAST of FE673162 vs. TrEMBL
Match: B9I516_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_569452 PE=4 SV=1) HSP 1 Score: 313.923 bits (803), Expect = 6.632e-84 Identity = 161/211 (76.30%), Postives = 176/211 (83.41%), Query Frame = -2 Query: 10 SKDGPVARTGLSGIRIVEED-DVGSSRRPLKRMSSPERWEAKQMIASGVLSVSEYPTYDEEGDGVMYQXXXXXXXXXXXXXXXEPAFLQGQSRYSMDMSPVKIFKNPEGSLGRAAALQSALIKXXXXXXXXXXRTMLDSIPKDLNRPWEDPMPESGERHLAQELRGVGLSAYDMPEWKKDAYGKTITFGQRSKLSIQEQRQSLPIHKLKKK 639 SK+GPV RTGLSGIRIVEE+ D G SRRPLKRMSSPE+WEAKQ+IASGVLSV E+P YD+E DG +YQ EPAFLQGQ+RYS+D+SPVKIFKNPEGSL RAAALQSALIK RTMLDSIPKDLNRPWEDPMPE+GERHLAQELRGVGLSAYDMPEWKKDA+GK +TFGQRSKLSIQEQRQSLPI+KLKK+ Sbjct: 352 SKEGPVTRTGLSGIRIVEEEEDTGPSRRPLKRMSSPEKWEAKQLIASGVLSVQEHPMYDDEVDGFLYQEEGVEEELEIEMNEDEPAFLQGQTRYSVDVSPVKIFKNPEGSLSRAAALQSALIKERREVRDQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAYDMPEWKKDAFGKALTFGQRSKLSIQEQRQSLPIYKLKKE 562
BLAST of FE673162 vs. TrEMBL
Match: C5WUR3_SORBI (Putative uncharacterized protein Sb01g044300 OS=Sorghum bicolor GN=Sb01g044300 PE=4 SV=1) HSP 1 Score: 296.204 bits (757), Expect = 1.431e-78 Identity = 152/208 (73.08%), Postives = 168/208 (80.77%), Query Frame = -2 Query: 10 GPVARTGLSGIRIVEEDDVG-SSRRPLKRMSSPERWEAKQMIASGVLSVSEYPTYDEEGDGVMYQXXXXXXXXXXXXXXXEPAFLQGQSRYSMDMSPVKIFKNPEGSLGRAAALQSALIKXXXXXXXXXXRTMLDSIPKDLNRPWEDPMPESGERHLAQELRGVGLSAYDMPEWKKDAYGKTITFGQRSKLSIQEQRQSLPIHKLKKK 630 G R GLSGI I EED+ +SRRPLKRMSSPERWEAKQ+IASGVL V +YP +DE+GDG+MYQ EPAFLQGQSR+S+DMSPVKIFKNPEGSL RAAALQSALIK R MLDSIPKDLNRPWEDPMP++GERHLAQELRGVGLSAYDMPEWKK+AYGK +TFGQRSKLS+QEQRQSLPI+KLKK+ Sbjct: 390 GSGKRLGLSGIVITEEDEAAPTSRRPLKRMSSPERWEAKQLIASGVLDVRDYPMFDEDGDGMMYQEEGAEEELEIELNEDEPAFLQGQSRFSIDMSPVKIFKNPEGSLSRAAALQSALIKERREVREQEQRAMLDSIPKDLNRPWEDPMPDTGERHLAQELRGVGLSAYDMPEWKKEAYGKALTFGQRSKLSLQEQRQSLPIYKLKKE 597
BLAST of FE673162 vs. TrEMBL
Match: Q6K4U8_ORYSJ (Putative RNA helicase OS=Oryza sativa subsp. japonica GN=OSJNBa0010K08.27 PE=4 SV=1) HSP 1 Score: 295.049 bits (754), Expect = 3.188e-78 Identity = 151/208 (72.60%), Postives = 168/208 (80.77%), Query Frame = -2 Query: 10 GPVARTGLSGIRIVEEDDVGS-SRRPLKRMSSPERWEAKQMIASGVLSVSEYPTYDEEGDGVMYQXXXXXXXXXXXXXXXEPAFLQGQSRYSMDMSPVKIFKNPEGSLGRAAALQSALIKXXXXXXXXXXRTMLDSIPKDLNRPWEDPMPESGERHLAQELRGVGLSAYDMPEWKKDAYGKTITFGQRSKLSIQEQRQSLPIHKLKKK 630 G R GLSGI I EED+V SRRPLKRMSSPERWEAKQ+IASGVL V +YP +DE+GDG++YQ EPAFLQGQSR+S+DMSPVKIFKNPEGSL RAAALQ+ALIK R MLDSIPKDLNRPWEDPMP++GERHLAQELRGVGLSAYDMPEWKK+AYGK +TFGQRSKLSIQ+QRQSLPI+KLKK+ Sbjct: 388 GSGKRLGLSGIMIAEEDEVAPPSRRPLKRMSSPERWEAKQLIASGVLDVRDYPMFDEDGDGMLYQEEGAEEEQEIELNEDEPAFLQGQSRFSIDMSPVKIFKNPEGSLSRAAALQTALIKERREVREQEQRAMLDSIPKDLNRPWEDPMPDTGERHLAQELRGVGLSAYDMPEWKKEAYGKALTFGQRSKLSIQDQRQSLPIYKLKKE 595
BLAST of FE673162 vs. TrEMBL
Match: B9F559_ORYSJ (Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_06372 PE=4 SV=1) HSP 1 Score: 295.049 bits (754), Expect = 3.188e-78 Identity = 151/208 (72.60%), Postives = 168/208 (80.77%), Query Frame = -2 Query: 10 GPVARTGLSGIRIVEEDDVGS-SRRPLKRMSSPERWEAKQMIASGVLSVSEYPTYDEEGDGVMYQXXXXXXXXXXXXXXXEPAFLQGQSRYSMDMSPVKIFKNPEGSLGRAAALQSALIKXXXXXXXXXXRTMLDSIPKDLNRPWEDPMPESGERHLAQELRGVGLSAYDMPEWKKDAYGKTITFGQRSKLSIQEQRQSLPIHKLKKK 630 G R GLSGI I EED+V SRRPLKRMSSPERWEAKQ+IASGVL V +YP +DE+GDG++YQ EPAFLQGQSR+S+DMSPVKIFKNPEGSL RAAALQ+ALIK R MLDSIPKDLNRPWEDPMP++GERHLAQELRGVGLSAYDMPEWKK+AYGK +TFGQRSKLSIQ+QRQSLPI+KLKK+ Sbjct: 388 GSGKRLGLSGIMIAEEDEVAPPSRRPLKRMSSPERWEAKQLIASGVLDVRDYPMFDEDGDGMLYQEEGAEEEQEIELNEDEPAFLQGQSRFSIDMSPVKIFKNPEGSLSRAAALQTALIKERREVREQEQRAMLDSIPKDLNRPWEDPMPDTGERHLAQELRGVGLSAYDMPEWKKEAYGKALTFGQRSKLSIQDQRQSLPIYKLKKE 595
BLAST of FE673162 vs. TrEMBL
Match: A2X3S5_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_06862 PE=4 SV=1) HSP 1 Score: 295.049 bits (754), Expect = 3.188e-78 Identity = 151/208 (72.60%), Postives = 168/208 (80.77%), Query Frame = -2 Query: 10 GPVARTGLSGIRIVEEDDVGS-SRRPLKRMSSPERWEAKQMIASGVLSVSEYPTYDEEGDGVMYQXXXXXXXXXXXXXXXEPAFLQGQSRYSMDMSPVKIFKNPEGSLGRAAALQSALIKXXXXXXXXXXRTMLDSIPKDLNRPWEDPMPESGERHLAQELRGVGLSAYDMPEWKKDAYGKTITFGQRSKLSIQEQRQSLPIHKLKKK 630 G R GLSGI I EED+V SRRPLKRMSSPERWEAKQ+IASGVL V +YP +DE+GDG++YQ EPAFLQGQSR+S+DMSPVKIFKNPEGSL RAAALQ+ALIK R MLDSIPKDLNRPWEDPMP++GERHLAQELRGVGLSAYDMPEWKK+AYGK +TFGQRSKLSIQ+QRQSLPI+KLKK+ Sbjct: 388 GSGKRLGLSGIMIAEEDEVAPPSRRPLKRMSSPERWEAKQLIASGVLDVRDYPMFDEDGDGMLYQEEGAEEEQEIELNEDEPAFLQGQSRFSIDMSPVKIFKNPEGSLSRAAALQTALIKERREVREQEQRAMLDSIPKDLNRPWEDPMPDTGERHLAQELRGVGLSAYDMPEWKKEAYGKALTFGQRSKLSIQDQRQSLPIYKLKKE 595
BLAST of FE673162 vs. TrEMBL
Match: Q0WLB6_ARATH (Putative ATP-dependent RNA helicase OS=Arabidopsis thaliana GN=At3g26560 PE=2 SV=1) HSP 1 Score: 269.626 bits (688), Expect = 1.434e-70 Identity = 136/179 (75.98%), Postives = 148/179 (82.68%), Query Frame = -2 Query: 10 MSSPERWEAKQMIASGVLSVSEYPTYDEEGDGVMYQXXXXXXXXXXXXXXXEPAFLQGQSRYSMDMSPVKIFKNPEGSLGRAAALQSALIKXXXXXXXXXXRTMLDSIPKDLNRPWEDPMPESGERHLAQELRGVGLSAYDMPEWKKDAYGKTITFGQRSKLSIQEQRQSLPIHKLKKK 546 MSSPERWEAKQ+IASGVL V E+P YDE+GDG++YQ EPAFLQGQ+RYS+DMSPVKIFKNPEGSL RAAALQSAL K RTMLDSIPKDLNRPWEDPMPE+GERHLAQELRGVGLSAYDMPEWKKDA+GKT TFGQRSKLSIQEQR+SLPI+KLKK+ Sbjct: 1 MSSPERWEAKQLIASGVLRVDEFPMYDEDGDGMLYQEEGAEEELEIEMNEDEPAFLQGQTRYSVDMSPVKIFKNPEGSLSRAAALQSALTKERREMREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAYDMPEWKKDAFGKTPTFGQRSKLSIQEQRESLPIYKLKKE 179
BLAST of FE673162 vs. TAIR peptide
Match: AT3G26560.1 (| Symbols: | ATP-dependent RNA helicase, putative | chr3:9750122-9753719 REVERSE LENGTH=1168) HSP 1 Score: 313.923 bits (803), Expect = 4.670e-86 Identity = 158/210 (75.24%), Postives = 175/210 (83.33%), Query Frame = -2 Query: 10 SKDGPVARTGLSGIRIVEEDDVGSSRRPLKRMSSPERWEAKQMIASGVLSVSEYPTYDEEGDGVMYQXXXXXXXXXXXXXXXEPAFLQGQSRYSMDMSPVKIFKNPEGSLGRAAALQSALIKXXXXXXXXXXRTMLDSIPKDLNRPWEDPMPESGERHLAQELRGVGLSAYDMPEWKKDAYGKTITFGQRSKLSIQEQRQSLPIHKLKKK 639 +KDG V +TG+SGIRIVEE+DV SRRPLK+MSSPERWEAKQ+IASGVL V E+P YDE+GDG++YQ EPAFLQGQ+RYS+DMSPVKIFKNPEGSL RAAALQSAL K RTMLDSIPKDLNRPWEDPMPE+GERHLAQELRGVGLSAYDMPEWKKDA+GKT TFGQRSKLSIQEQR+SLPI+KLKK+ Sbjct: 314 TKDGQVTKTGISGIRIVEENDVAPSRRPLKKMSSPERWEAKQLIASGVLRVDEFPMYDEDGDGMLYQEEGAEEELEIEMNEDEPAFLQGQTRYSVDMSPVKIFKNPEGSLSRAAALQSALTKERREMREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAYDMPEWKKDAFGKTPTFGQRSKLSIQEQRESLPIYKLKKE 523 The following BLAST results are available for this feature:
BLAST of FE673162 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot) Total hits: 6
BLAST of FE673162 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl) Total hits: 10
BLAST of FE673162 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide) Total hits: 1
InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FE673162 ID=FE673162; Name=FE673162; organism=Cicer arietinum; type=EST; length=649bpback to top |