GR390971

EST Overview
NameGR390971
Unique NameGR390971
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length398
Libraries
Library NameType
LIBEST_024777 ICC1882 dehydration stressed root cDNA librarycdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
Homology
[Close]
BLAST of GR390971 vs. TrEMBL
Match: D7SNU0_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_29.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00021069001 PE=4 SV=1)

HSP 1 Score: 57.7658 bits (138), Expect = 4.155e-7
Identity = 29/43 (67.44%), Postives = 34/43 (79.07%), Query Frame = 3 
Query:    3 SILDGNDKLL--NMKNKESREEWRETNASSLSMIRRIQALGIQ 125
            SILDGNDK      +NKE REEW++ NA SLS+I+RIQALGIQ
Sbjct:  664 SILDGNDKFFMEERQNKERREEWKQRNACSLSLIKRIQALGIQ 706
[Close]
BLAST of GR390971 vs. TrEMBL
Match: B9IJH3_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_577421 PE=4 SV=1)

HSP 1 Score: 57.7658 bits (138), Expect = 4.155e-7
Identity = 30/42 (71.43%), Postives = 35/42 (83.33%), Query Frame = 3 
Query:    6 ILDGNDK--LLNMKNKESREEWRETNASSLSMIRRIQALGIQ 125
            ILDGND+  +   K KESREEWR+ NASSLS+IRRIQALGI+
Sbjct:  790 ILDGNDQWFMEGGKRKESREEWRQNNASSLSLIRRIQALGIK 831
[Close]
BLAST of GR390971 vs. TrEMBL
Match: A5AGG9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_027097 PE=4 SV=1)

HSP 1 Score: 57.7658 bits (138), Expect = 4.155e-7
Identity = 29/43 (67.44%), Postives = 34/43 (79.07%), Query Frame = 3 
Query:    3 SILDGNDKLL--NMKNKESREEWRETNASSLSMIRRIQALGIQ 125
            SILDGNDK      +NKE REEW++ NA SLS+I+RIQALGIQ
Sbjct:  774 SILDGNDKFFMEERQNKERREEWKQRNACSLSLIKRIQALGIQ 816
The following BLAST results are available for this feature:
BLAST of GR390971 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 3
Match NameE-valueIdentityDescription
D7SNU0_VITVI4.155e-767.44Whole genome shotgun sequence of line PN40024, sca... [more]
B9IJH3_POPTR4.155e-771.43Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
A5AGG9_VITVI4.155e-767.44Putative uncharacterized protein OS=Vitis vinifera... [more]
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Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GR390971 ID=GR390971; Name=GR390971; organism=Cicer arietinum; type=EST; length=398bp
TGAGCATACTTGATGGAAATGATAAATTGCTCAACATGAAAAACAAGGAA
AGTAGGGAAGAATGGAGAGAAACAAATGCTAGTTCTTTGTCAATGATTAG
GAGAATTCAAGCTCTAGGAATACAGTAAGAAGTTATACAAGAAATTGGAC
TGATCAAATGGTAATTAGGGGCCGGTTACTTTATGAAAACATTTCCTGTT
TTCATTTCCTAAATTGTGTTGATTTTCCTCGCTAAGATGAAGGTAAGAGA
CTTTCGAAGTAAACAATTGTCTATATTTTTAAAAACAATGAAAATATCAA
CAACAAAAAATTGTTTTCATTATTTTCAGAAATGCATTTTCATTAACTAG
CATTTCATCTTATTTCCATGATAGTGGTTTACTTCAAGAGTCTCTCAT
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