GR393237

EST Overview
NameGR393237
Unique NameGR393237
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length503
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
Homology
BLAST of GR393237 vs. TrEMBL
Match: B9S5F6_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1571370 PE=4 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.505e-12
Identity = 33/39 (84.62%), Postives = 39/39 (100.00%), Query Frame = -2
Query:  383 ARKGGCVRVSFGLKPAAVRVEGFDCLNRDRQNSSVPAVA 499
            +RKGGCVR+++GLKPAAVRVEGFDCLNRDRQNSS+PA+A
Sbjct:  137 SRKGGCVRMNYGLKPAAVRVEGFDCLNRDRQNSSIPAMA 175          
BLAST of GR393237 vs. TrEMBL
Match: A9PDT4_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_831131 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 1.965e-12
Identity = 34/39 (87.18%), Postives = 36/39 (92.31%), Query Frame = -2
Query:  383 ARKGGCVRVSFGLKPAAVRVEGFDCLNRDRQNSSVPAVA 499
            ARKGGC R+ FGLKPA VRVEGFDCLNRDRQNSS+PAVA
Sbjct:  140 ARKGGCARMKFGLKPAMVRVEGFDCLNRDRQNSSIPAVA 178          
BLAST of GR393237 vs. TrEMBL
Match: D7TT29_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_6.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00031028001 PE=4 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 3.352e-12
Identity = 34/39 (87.18%), Postives = 36/39 (92.31%), Query Frame = -2
Query:  383 ARKGGCVRVSFGLKPAAVRVEGFDCLNRDRQNSSVPAVA 499
            ARKGGCVR+  G KPAAVRVEGFDCLNRDRQNSS+PAVA
Sbjct:  141 ARKGGCVRMKVGFKPAAVRVEGFDCLNRDRQNSSIPAVA 179          
BLAST of GR393237 vs. TrEMBL
Match: Q1KUV3_9ROSI (Putative uncharacterized protein OS=Cleome spinosa PE=4 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.663e-11
Identity = 32/37 (86.49%), Postives = 36/37 (97.30%), Query Frame = -2
Query:  383 KGGCVRVSFGLKPAAVRVEGFDCLNRDRQNSSVPAVA 493
            KGGCVR+ FGLKPAAVRVEGFDCL+RDRQNSS+PA+A
Sbjct:  164 KGGCVRMKFGLKPAAVRVEGFDCLDRDRQNSSIPAMA 200          
BLAST of GR393237 vs. TrEMBL
Match: B9N232_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_670909 PE=4 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 2.837e-11
Identity = 32/36 (88.89%), Postives = 34/36 (94.44%), Query Frame = -2
Query:  383 GGCVRVSFGLKPAAVRVEGFDCLNRDRQNSSVPAVA 490
            GGCVR+ FGLKPA VRVEGFDCLNRDRQNSS+PAVA
Sbjct:  143 GGCVRMKFGLKPAEVRVEGFDCLNRDRQNSSIPAVA 178          
BLAST of GR393237 vs. TrEMBL
Match: Q1KUR8_9ROSI (Putative uncharacterized protein OS=Cleome spinosa PE=4 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 8.256e-11
Identity = 32/37 (86.49%), Postives = 35/37 (94.59%), Query Frame = -2
Query:  383 KGGCVRVSFGLKPAAVRVEGFDCLNRDRQNSSVPAVA 493
            KGG VR+ FGLKPAAVRVEGFDCLNRDRQNSS+PA+A
Sbjct:  162 KGGYVRMKFGLKPAAVRVEGFDCLNRDRQNSSIPAMA 198          
BLAST of GR393237 vs. TrEMBL
Match: D7KZI7_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_477491 PE=4 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.839e-10
Identity = 31/40 (77.50%), Postives = 35/40 (87.50%), Query Frame = -2
Query:  383 RARKGGCVRVSFGLKPAAVRVEGFDCLNRDRQNSSVPAVA 502
            +A  GGC R+ FG+KPA VRVEGFDCLNRDRQNSS+PAVA
Sbjct:  120 KAGGGGCGRMKFGVKPATVRVEGFDCLNRDRQNSSIPAVA 159          
BLAST of GR393237 vs. TrEMBL
Match: C6TFM5_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 5.351e-10
Identity = 30/39 (76.92%), Postives = 34/39 (87.18%), Query Frame = -2
Query:  383 ARKGGCVRVSFGLKPAAVRVEGFDCLNRDRQNSSVPAVA 499
            +RK GC R+ FGLKPAAVRVEGFDCL+RD QNS +PAVA
Sbjct:  141 SRKAGCARMKFGLKPAAVRVEGFDCLSRDCQNSGIPAVA 179          
BLAST of GR393237 vs. TrEMBL
Match: C6SVR4_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 5.351e-10
Identity = 30/39 (76.92%), Postives = 35/39 (89.74%), Query Frame = -2
Query:  383 ARKGGCVRVSFGLKPAAVRVEGFDCLNRDRQNSSVPAVA 499
            +RKGGCVR++FGLKPAAVRVEGFDCLN+D QNS +  VA
Sbjct:  135 SRKGGCVRMTFGLKPAAVRVEGFDCLNKDCQNSRITVVA 173          
BLAST of GR393237 vs. TrEMBL
Match: Q8LF93_ARATH (At3g02555 OS=Arabidopsis thaliana GN=At3g02555 PE=2 SV=1)

HSP 1 Score: 64.3142 bits (155), Expect = 4.530e-9
Identity = 28/37 (75.68%), Postives = 32/37 (86.49%), Query Frame = -2
Query:  383 KGGCVRVSFGLKPAAVRVEGFDCLNRDRQNSSVPAVA 493
            K GC R+ FG+KPA VRVEGFDCLNRDR NSS+PA+A
Sbjct:  126 KSGCGRMKFGVKPATVRVEGFDCLNRDRPNSSIPAMA 162          
BLAST of GR393237 vs. TAIR peptide
Match: AT3G02555.1 (| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G16110.1); Has 130 Blast hits to 130 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 130; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr3:540024-540955 REVERSE LENGTH=162)

HSP 1 Score: 64.3142 bits (155), Expect = 4.012e-11
Identity = 28/37 (75.68%), Postives = 32/37 (86.49%), Query Frame = -2
Query:  383 KGGCVRVSFGLKPAAVRVEGFDCLNRDRQNSSVPAVA 493
            K GC R+ FG+KPA VRVEGFDCLNRDR NSS+PA+A
Sbjct:  126 KSGCGRMKFGVKPATVRVEGFDCLNRDRPNSSIPAMA 162          
BLAST of GR393237 vs. TAIR peptide
Match: AT5G16110.1 (| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G02555.1); Has 133 Blast hits to 133 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 133; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr5:5261171-5262668 REVERSE LENGTH=244)

HSP 1 Score: 63.1586 bits (152), Expect = 8.939e-11
Identity = 28/35 (80.00%), Postives = 31/35 (88.57%), Query Frame = -2
Query:  383 GCVRVSFGLKPAAVRVEGFDCLNRDRQNSSVPAVA 487
            GCVR+ FGL   AVRVEGFDCLNRDRQNSS+PA+A
Sbjct:  210 GCVRMKFGLNSPAVRVEGFDCLNRDRQNSSIPAMA 244          
BLAST of GR393237 vs. TAIR peptide
Match: AT1G68490.1 (| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G13390.2); Has 125 Blast hits to 125 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 125; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:25693926-25694946 FORWARD LENGTH=183)

HSP 1 Score: 50.0618 bits (118), Expect = 7.831e-7
Identity = 26/39 (66.67%), Postives = 31/39 (79.49%), Query Frame = -2
Query:  383 RKGGCV-RVSFGLKPAAVRVEGFDCLNRDRQNSSVPAVA 496
            RKGGCV R +FG  P  VRVEGFDCL+RD +N S+PA+A
Sbjct:  146 RKGGCVVRGNFGNSPK-VRVEGFDCLDRDSRNCSIPALA 183          
The following BLAST results are available for this feature:
BLAST of GR393237 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
B9S5F6_RICCO1.505e-1284.62Putative uncharacterized protein OS=Ricinus commun... [more]
A9PDT4_POPTR1.965e-1287.18Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
D7TT29_VITVI3.352e-1287.18Whole genome shotgun sequence of line PN40024, sca... [more]
Q1KUV3_9ROSI1.663e-1186.49Putative uncharacterized protein OS=Cleome spinosa... [more]
B9N232_POPTR2.837e-1188.89Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
Q1KUR8_9ROSI8.256e-1186.49Putative uncharacterized protein OS=Cleome spinosa... [more]
D7KZI7_ARALY1.839e-1077.50Putative uncharacterized protein OS=Arabidopsis ly... [more]
C6TFM5_SOYBN5.351e-1076.92Putative uncharacterized protein OS=Glycine max PE... [more]
C6SVR4_SOYBN5.351e-1076.92Putative uncharacterized protein OS=Glycine max PE... [more]
Q8LF93_ARATH4.530e-975.68At3g02555 OS=Arabidopsis thaliana GN=At3g02555 PE=... [more]
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BLAST of GR393237 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 3
Match NameE-valueIdentityDescription
AT3G02555.14.012e-1175.68| Symbols: | unknown protein; BEST Arabidopsis th... [more]
AT5G16110.18.939e-1180.00| Symbols: | unknown protein; FUNCTIONS IN: molec... [more]
AT1G68490.17.831e-766.67| Symbols: | unknown protein; FUNCTIONS IN: molec... [more]
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Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GR393237 ID=GR393237; Name=GR393237; organism=Cicer arietinum; type=EST; length=503bp
GCATTAAAAATATCACTTAAAATTAATCCATTGAATATAATAAACATACT
TATAAATTTAGCTAAATATATTTACACATAATATAACCAAAATCACCAAC
TCTCTATACATGATATTCTCATGGTGATAACCTAAATATTTTTAAAAGAT
ACTTATATCAAAACATCCTTATCCTTATATTACACAGAAAAAAACATGCT
TTTTATACATTAAACCTTCTCAAGAACACAAGGTTTTGTTTCTGTTTCTT
CAACATCATTTTTACCCTTAAACTACTCAAAAGATATTTTCTTTTTTCTA
GTTAAGTTAAGTCATTTTTTTTCTTAACATGTGATCGCACTCAGCTCCGT
CTTTATATACACTTCTCTGAATGGAATGTTTAAGCAACAGCAGGGACGCT
CGAATTCTGGCGATCCCTGTTGAGGCAATCGAATCCTTCTACTCTAACCG
CAGCCGGTTTAAGTCCAAAACTTACCCTAACGCATCCTCCTTTGCGGGCC
CGC
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