GR399288
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GR399288 vs. TrEMBL
Match: B9HE70_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_764577 PE=4 SV=1) HSP 1 Score: 211.846 bits (538), Expect = 4.256e-53 Identity = 101/152 (66.45%), Postives = 127/152 (83.55%), Query Frame = -3 Query: 255 WLKALKFYASHRQYFDKLVEISIVSLARDGGSENGFSLSSAVVSFILQKDGIHKARDIYKRFLALPHPGLASYRNCIELETNLASTGDKNSLINARKLYEAALATYEQNVGLWQDYYRLETKMGTSEKATAVYCRAKRTLEDATEFIASPDL 710 WL AL +A ++Y DKLVEIS++S+A+DGGS++GFSLSSA+V+F+LQKDGIHKAR YKRFLALPHPGL YR CIELE NLAS GDK+ L NARKLYE+ALATY Q+V LWQ+Y+ +E K+GTSE A AV RA++TL+++ F+A+PDL Sbjct: 491 WLMALNVFAKQKKYLDKLVEISLISVAKDGGSDDGFSLSSAIVNFMLQKDGIHKARKTYKRFLALPHPGLVLYRCCIELEVNLASVGDKDCLANARKLYESALATYGQDVTLWQNYHSMEIKLGTSETANAVCWRARKTLKNSAAFVAAPDL 642
BLAST of GR399288 vs. TrEMBL
Match: B9RXI9_RICCO (Hepatocellular carcinoma-associated antigen, putative OS=Ricinus communis GN=RCOM_0903860 PE=4 SV=1) HSP 1 Score: 188.734 bits (478), Expect = 3.858e-46 Identity = 90/151 (59.60%), Postives = 119/151 (78.81%), Query Frame = -3 Query: 258 WLKALKFYASHRQYFDKLVEISIVSLARDGGSENGFSLSSAVVSFILQKDGIHKARDIYKRFLALPHPGLASYRNCIELETNLASTGDKNSLINARKLYEAALATYEQNVGLWQDYYRLETKMGTSEKATAVYCRAKRTLEDATEFIASPD 710 W+ A+K +A + YF++LVE+S +S+A+DGG ++GFSL SA+V+ +LQK+GI AR+ YKRFLALP PGLA R CIELE NLAS DK L NARKLYE+ALAT++QNV LW+DY+ +E K+GTSE A AVY RA++TL+++ I SPD Sbjct: 500 WVMAIKLFAVEKHYFEQLVEMSFISVAKDGGGDHGFSLPSAIVNCVLQKNGIQFARETYKRFLALPRPGLALLRTCIELEENLASIHDKECLGNARKLYESALATHDQNVRLWRDYHAMEIKLGTSETANAVYWRARKTLKNSASLITSPD 650
BLAST of GR399288 vs. TrEMBL
Match: D7MDM0_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_913702 PE=4 SV=1) HSP 1 Score: 182.185 bits (461), Expect = 3.611e-44 Identity = 88/147 (59.86%), Postives = 114/147 (77.55%), Query Frame = -3 Query: 270 WLKALKFYASHRQYFDKLVEISIVSLARDGGSENGFSLSSAVVSFILQKDGIHKARDIYKRFLALPHPGLASYRNCIELETNLASTGDKNSLINARKLYEAALATYEQNVGLWQDYYRLETKMGTSEKATAVYCRAKRTLEDATEFI 710 WL ALKF+A R Y DKLVE+SI+ + GS++ FSLSS VV+F+L+ G H AR IYKRFLALP P L Y++CIE+ETNL S GDK+ L NARKLY++A+A+Y Q+V LW++YY LETKMGTSE A VY RA++TL+++ +FI Sbjct: 505 WLMALKFFAHQRTYLDKLVEMSILLATKSHGSDHVFSLSSTVVNFVLETKGGHSARKIYKRFLALPGPSLVLYKDCIEIETNLISVGDKDGLSNARKLYDSAVASYSQDVELWKNYYLLETKMGTSETANGVYWRARKTLKESADFI 651
BLAST of GR399288 vs. TrEMBL
Match: Q9M0I7_ARATH (At4g28200 OS=Arabidopsis thaliana GN=At4g28200 PE=2 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 5.214e-43 Identity = 85/147 (57.82%), Postives = 110/147 (74.83%), Query Frame = -3 Query: 270 WLKALKFYASHRQYFDKLVEISIVSLARDGGSENGFSLSSAVVSFILQKDGIHKARDIYKRFLALPHPGLASYRNCIELETNLASTGDKNSLINARKLYEAALATYEQNVGLWQDYYRLETKMGTSEKATAVYCRAKRTLEDATEFI 710 WL A F+A R Y DKLVE+SI+S + GS++ FSL+S VV F+L+ G H AR IYKRFLALP P L Y+ CIE+ETNL S GDK+ L NARKLY++A+A+Y Q+V LW++YY LETK+GTSE A VY RA++TL ++ +FI Sbjct: 501 WLMAFNFFAHQRTYLDKLVEMSILSATKSHGSDHVFSLASTVVKFVLETKGAHSARKIYKRFLALPGPSLVLYKGCIEIETNLISVGDKDGLSNARKLYDSAVASYGQDVELWKNYYSLETKLGTSETANGVYWRARKTLNESADFI 647
BLAST of GR399288 vs. TrEMBL
Match: Q56WH0_ARATH (Putative uncharacterized protein At4g28200 OS=Arabidopsis thaliana GN=At4g28200 PE=2 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 5.214e-43 Identity = 85/147 (57.82%), Postives = 110/147 (74.83%), Query Frame = -3 Query: 270 WLKALKFYASHRQYFDKLVEISIVSLARDGGSENGFSLSSAVVSFILQKDGIHKARDIYKRFLALPHPGLASYRNCIELETNLASTGDKNSLINARKLYEAALATYEQNVGLWQDYYRLETKMGTSEKATAVYCRAKRTLEDATEFI 710 WL A F+A R Y DKLVE+SI+S + GS++ FSL+S VV F+L+ G H AR IYKRFLALP P L Y+ CIE+ETNL S GDK+ L NARKLY++A+A+Y Q+V LW++YY LETK+GTSE A VY RA++TL ++ +FI Sbjct: 168 WLMAFNFFAHQRTYLDKLVEMSILSATKSHGSDHVFSLASTVVKFVLETKGAHSARKIYKRFLALPGPSLVLYKGCIEIETNLISVGDKDGLSNARKLYDSAVASYGQDVELWKNYYSLETKLGTSETANGVYWRARKTLNESADFI 314
BLAST of GR399288 vs. TrEMBL
Match: Q6YPH2_ORYSJ (Os02g0103900 protein OS=Oryza sativa subsp. japonica GN=OJA1212_C06.1 PE=2 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 8.615e-38 Identity = 76/144 (52.78%), Postives = 110/144 (76.39%), Query Frame = -3 Query: 279 WLKALKFYASHRQYFDKLVEISIVSLARDGGSENGFSLSSAVVSFILQKDGIHKARDIYKRFLALPHPGLASYRNCIELETNLASTGDKNSLINARKLYEAALATYEQNVGLWQDYYRLETKMGTSEKATAVYCRAKRTLEDAT 710 W A+K ++ + YF+KLV+ +++SL+ GG++ G S+SSA+V +ILQ+DGI +AR +YKRFLALP P ++ CIELETNLAS G+++SL+NARKLY+AAL Y Q LW++YY +E K+GTSE A A+Y RA++ L D++ Sbjct: 536 WHTAMKLFSHEKVYFEKLVKCAMLSLSSAGGNDCGASVSSAIVGWILQRDGIKQARKMYKRFLALPRPSFKFFQYCIELETNLASIGNQDSLVNARKLYDAALDLYPQERELWRNYYNMELKLGTSETANAIYWRARKVLGDSS 679
BLAST of GR399288 vs. TrEMBL
Match: B8AGW0_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_05476 PE=4 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 8.615e-38 Identity = 76/144 (52.78%), Postives = 110/144 (76.39%), Query Frame = -3 Query: 279 WLKALKFYASHRQYFDKLVEISIVSLARDGGSENGFSLSSAVVSFILQKDGIHKARDIYKRFLALPHPGLASYRNCIELETNLASTGDKNSLINARKLYEAALATYEQNVGLWQDYYRLETKMGTSEKATAVYCRAKRTLEDAT 710 W A+K ++ + YF+KLV+ +++SL+ GG++ G S+SSA+V +ILQ+DGI +AR +YKRFLALP P ++ CIELETNLAS G+++SL+NARKLY+AAL Y Q LW++YY +E K+GTSE A A+Y RA++ L D++ Sbjct: 537 WHTAMKLFSHEKVYFEKLVKCAMLSLSSAGGNDCGASVSSAIVGWILQRDGIKQARKMYKRFLALPRPSFKFFQYCIELETNLASIGNQDSLVNARKLYDAALDLYPQERELWRNYYNMELKLGTSETANAIYWRARKVLGDSS 680
BLAST of GR399288 vs. TrEMBL
Match: A3A269_ORYSJ (Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_05012 PE=4 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 8.615e-38 Identity = 76/144 (52.78%), Postives = 110/144 (76.39%), Query Frame = -3 Query: 279 WLKALKFYASHRQYFDKLVEISIVSLARDGGSENGFSLSSAVVSFILQKDGIHKARDIYKRFLALPHPGLASYRNCIELETNLASTGDKNSLINARKLYEAALATYEQNVGLWQDYYRLETKMGTSEKATAVYCRAKRTLEDAT 710 W A+K ++ + YF+KLV+ +++SL+ GG++ G S+SSA+V +ILQ+DGI +AR +YKRFLALP P ++ CIELETNLAS G+++SL+NARKLY+AAL Y Q LW++YY +E K+GTSE A A+Y RA++ L D++ Sbjct: 564 WHTAMKLFSHEKVYFEKLVKCAMLSLSSAGGNDCGASVSSAIVGWILQRDGIKQARKMYKRFLALPRPSFKFFQYCIELETNLASIGNQDSLVNARKLYDAALDLYPQERELWRNYYNMELKLGTSETANAIYWRARKVLGDSS 707
BLAST of GR399288 vs. TrEMBL
Match: C5X762_SORBI (Putative uncharacterized protein Sb02g000660 OS=Sorghum bicolor GN=Sb02g000660 PE=4 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 1.625e-36 Identity = 78/148 (52.70%), Postives = 105/148 (70.95%), Query Frame = -3 Query: 267 WLKALKFYASHRQYFDKLVEISIVSLARDGGSENGFSLSSAVVSFILQKDGIHKARDIYKRFLALPHPGLASYRNCIELETNLASTGDKNSLINARKLYEAALATYEQNVGLWQDYYRLETKMGTSEKATAVYCRAKRTLEDATEFIA 710 W A+K + + +F+KLV+IS +SL+ GGS++G S+SSA+V + LQ+DG+ AR +YKRFLALP P L + CIELE NLAS GD +L NAR+LY++AL Y Q +W++YY LE KMGTSE A AVY RA++ L D+T A Sbjct: 532 WHMAMKLFFHDKVFFEKLVKISTLSLSLAGGSDSGASVSSAIVGWYLQRDGMKHARKMYKRFLALPRPSLKFMQYCIELEANLASLGDHGALTNARRLYDSALDLYPQEREVWRNYYNLELKMGTSESANAVYSRARKVLGDSTALTA 679
BLAST of GR399288 vs. TrEMBL
Match: D5A8C7_PICSI (Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 2.778e-28 Identity = 62/147 (42.18%), Postives = 96/147 (65.31%), Query Frame = -3 Query: 270 WLKALKFYASHRQYFDKLVEISIVSLARDGGSENGFSLSSAVVSFILQKDGIHKARDIYKRFLALPHPGLASYRNCIELETNLASTGDKNSLINARKLYEAALATYEQNVGLWQDYYRLETKMGTSEKATAVYCRAKRTLEDATEFI 710 W A++F++S R YFD++++I ++ GG G +L+ + ++LQ G+ AR++Y R LALP P L Y++CI E+ LA+ G + + N KLY++AL YEQN+ LW DY E K G S+ A++VY RA++TL+D+T FI Sbjct: 29 WHMAMEFFSSQRAYFDQILDILGNVISVGGGGRGGATLACTALDWVLQNQGVRCAREMYNRLLALPGPSLDFYKHCITFESQLAAVGCEEAAQNMCKLYDSALKLYEQNIELWLDYCAEELKAGRSDAASSVYWRARKTLKDSTAFI 175
BLAST of GR399288 vs. TAIR peptide
Match: AT4G28200.1 (| Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: RNA processing; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA-processing protein, HAT helix (InterPro:IPR003107), U3 small nucleolar RNA-associated protein 6 (InterPro:IPR013949); Has 492 Blast hits to 480 proteins in 206 species: Archae - 0; Bacteria - 2; Metazoa - 128; Fungi - 191; Plants - 60; Viruses - 0; Other Eukaryotes - 111 (source: NCBI BLink). | chr4:13987808-13990422 REVERSE LENGTH=648) HSP 1 Score: 178.333 bits (451), Expect = 3.536e-45 Identity = 85/147 (57.82%), Postives = 110/147 (74.83%), Query Frame = -3 Query: 270 WLKALKFYASHRQYFDKLVEISIVSLARDGGSENGFSLSSAVVSFILQKDGIHKARDIYKRFLALPHPGLASYRNCIELETNLASTGDKNSLINARKLYEAALATYEQNVGLWQDYYRLETKMGTSEKATAVYCRAKRTLEDATEFI 710 WL A F+A R Y DKLVE+SI+S + GS++ FSL+S VV F+L+ G H AR IYKRFLALP P L Y+ CIE+ETNL S GDK+ L NARKLY++A+A+Y Q+V LW++YY LETK+GTSE A VY RA++TL ++ +FI Sbjct: 501 WLMAFNFFAHQRTYLDKLVEMSILSATKSHGSDHVFSLASTVVKFVLETKGAHSARKIYKRFLALPGPSLVLYKGCIEIETNLISVGDKDGLSNARKLYDSAVASYGQDVELWKNYYSLETKLGTSETANGVYWRARKTLNESADFI 647 The following BLAST results are available for this feature:
BLAST of GR399288 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl) Total hits: 10
BLAST of GR399288 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide) Total hits: 1
InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GR399288 ID=GR399288; Name=GR399288; organism=Cicer arietinum; type=EST; length=712bpback to top Annotated Terms
The
following terms have been associated with
this EST:
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