GR399833

EST Overview


Name	GR399833
Unique Name	GR399833
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	734

Libraries


Library Name	Type
LIBEST_024783 ICC4958 Slow drought stresses root cDNA library	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

[Close]

BLAST of GR399833 vs. TrEMBL
Match: Q41680_9FABA (Narbonin OS=Vicia pannonica PE=2 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 2.450e-22
Identity = 38/73 (52.05%), Postives = 49/73 (67.12%), Query Frame = 2

Query:  251 LKKLLAGASTDPDDA--GKISREDFLEGVIDLLDAESLRGIFIWNANDSATPPPNG-KPFSFEIKAQELLTKS 460
            L+K+L G STDPDDA   KI+R+ F+ G   L    SL G+F WNA+DS TP  +G KP+  E+  Q+LLTKS
Sbjct:  219 LRKVLPGFSTDPDDAKHNKITRDVFIGGCTRLKQTSSLPGVFFWNAHDSVTPRSDGDKPYIVELSLQQLLTKS 291

HSP 2 Score: 59.6918 bits (143), Expect = 2.450e-22
Identity = 31/73 (42.47%), Postives = 45/73 (61.64%), Query Frame = 1

Query:   46 IKRLKEDTDLSVDVVSIAPSKPVNSKYHTLFLARHDYIDWVDYQF--YFETLKSKDEFKNIFLSLSDVYGSKK 258
            I  LK+D DL+++VVSIAPS+  +S Y  L+ A+ DYI+WVDYQF    + +   D F   F ++   Y  +K
Sbjct:  149 ITELKKDDDLNINVVSIAPSETNSSHYQKLYNAKKDYINWVDYQFSNQHKPVHKDDHFVEFFKTVEKDYHLRK 221

[Close]

BLAST of GR399833 vs. TrEMBL
Match: Q41679_9FABA (Narbonin (Fragment) OS=Vicia pannonica PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 4.147e-22
Identity = 37/72 (51.39%), Postives = 47/72 (65.28%), Query Frame = 2

Query:  251 LKKLLAGASTDPDDA--GKISREDFLEGVIDLLDAESLRGIFIWNANDSATPPPNG-KPFSFEIKAQELLTK 457
            L+K+L G STDPDDA   KI+R+ F+ G   L    SL G+F WNA+DS TP  +G KPF  E+  Q+LL K
Sbjct:  219 LRKVLPGFSTDPDDAKHNKITRDVFIGGCTRLKQTSSLPGVFFWNAHDSVTPRLDGDKPFIVELSLQQLLAK 290

HSP 2 Score: 62.003 bits (149), Expect = 4.147e-22
Identity = 32/73 (43.84%), Postives = 47/73 (64.38%), Query Frame = 1

Query:   46 IKRLKEDTDLSVDVVSIAPSKPVNSKYHTLFLARHDYIDWVDYQF--YFETLKSKDEFKNIFLSLSDVYGSKK 258
            I  LK+D DL+++VVSIAPS+  +S Y  L+ A+ DYI+WVDYQF    + +   D+F  IF ++   Y  +K
Sbjct:  149 ITELKKDDDLNINVVSIAPSETNSSHYQKLYNAKKDYINWVDYQFSNLHKPVHKDDDFVQIFKTVEKDYHLRK 221

[Close]

BLAST of GR399833 vs. TrEMBL
Match: Q39888_SOYBN (Putative narbonin OS=Glycine max PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 9.137e-22
Identity = 37/72 (51.39%), Postives = 47/72 (65.28%), Query Frame = 2

Query:  251 LKKLLAGASTDPDDA--GKISREDFLEGVIDLLDAESLRGIFIWNANDSATPPPNG-KPFSFEIKAQELLTK 457
            L+K+L G STDPDDA   KI+R+ F+ G   L    SL G+F WNA+DS TP  +G KPF  E+  Q+LL K
Sbjct:  219 LRKVLPGFSTDPDDAKHNKITRDVFIGGCTRLKQTSSLPGVFFWNAHDSVTPRLDGDKPFIVELTLQQLLAK 290

HSP 2 Score: 61.2326 bits (147), Expect = 9.137e-22
Identity = 32/73 (43.84%), Postives = 46/73 (63.01%), Query Frame = 1

Query:   46 IKRLKEDTDLSVDVVSIAPSKPVNSKYHTLFLARHDYIDWVDYQF--YFETLKSKDEFKNIFLSLSDVYGSKK 258
            I  LK+D DL+++VVSIAPS+  +S Y  L+ A+ DYI+WVDYQF    + +   D F  IF ++   Y  +K
Sbjct:  149 ITELKKDDDLNINVVSIAPSETNSSHYQKLYNAKKDYINWVDYQFSNQHKPVHKDDHFVEIFKTVEKDYHLRK 221

[Close]

BLAST of GR399833 vs. TrEMBL
Match: Q7DLM0_VICNA (Narbonin OS=Vicia narbonensis PE=3 SV=1)

HSP 1 Score: 62.003 bits (149), Expect = 8.003e-20
Identity = 34/73 (46.58%), Postives = 46/73 (63.01%), Query Frame = 1

Query:   46 IKRLKEDTDLSVDVVSIAPSKPVNSKYHTLFLARHDYIDWVDYQF--YFETLKSKDEFKNIFLSLSDVYGSKK 258
            I  LK+D DL+++VVSIAPS+  +S Y  L+ A+ DYI+WVDYQF    + + + D F  IF SL   Y   K
Sbjct:  149 ITELKKDDDLNINVVSIAPSENNSSHYQKLYNAKKDYINWVDYQFSNQQKPVSTDDAFVEIFKSLEKDYHPHK 221

HSP 2 Score: 60.077 bits (144), Expect = 8.003e-20
Identity = 34/70 (48.57%), Postives = 43/70 (61.43%), Query Frame = 2

Query:  257 KLLAGASTDPDDA--GKISREDFLEGVIDLLDAESLRGIFIWNANDSATPPPNG-KPFSFEIKAQELLTK 457
            K+L G STDP D    KI+R+ F+ G   L+   SL G+F WNANDS  P  +G KPF  E+  Q+LL K
Sbjct:  221 KVLPGFSTDPLDTKHNKITRDIFIGGCTRLVQTFSLPGVFFWNANDSVIPKRDGDKPFIVELTLQQLLAK 290

[Close]

BLAST of GR399833 vs. TrEMBL
Match: Q41675_VICNA (Narbonin OS=Vicia narbonensis PE=2 SV=2)

HSP 1 Score: 62.003 bits (149), Expect = 8.003e-20
Identity = 34/73 (46.58%), Postives = 46/73 (63.01%), Query Frame = 1

Query:   46 IKRLKEDTDLSVDVVSIAPSKPVNSKYHTLFLARHDYIDWVDYQF--YFETLKSKDEFKNIFLSLSDVYGSKK 258
            I  LK+D DL+++VVSIAPS+  +S Y  L+ A+ DYI+WVDYQF    + + + D F  IF SL   Y   K
Sbjct:  149 ITELKKDDDLNINVVSIAPSENNSSHYQKLYNAKKDYINWVDYQFGNQQKPVSTDDAFVEIFKSLEKDYHPHK 221

HSP 2 Score: 60.077 bits (144), Expect = 8.003e-20
Identity = 34/70 (48.57%), Postives = 43/70 (61.43%), Query Frame = 2

Query:  257 KLLAGASTDPDDA--GKISREDFLEGVIDLLDAESLRGIFIWNANDSATPPPNG-KPFSFEIKAQELLTK 457
            K+L G STDP D    KI+R+ F+ G   L+   SL G+F WNANDS  P  +G KPF  E+  Q+LL K
Sbjct:  221 KVLPGFSTDPLDTKHNKITRDIFIGGCTRLVQTFSLPGVFFWNANDSVIPKRDGDKPFIVELTLQQLLAK 290

[Close]

BLAST of GR399833 vs. TrEMBL
Match: Q08884_VICNA (Narbonin OS=Vicia narbonensis PE=1 SV=2)

HSP 1 Score: 62.003 bits (149), Expect = 8.003e-20
Identity = 34/73 (46.58%), Postives = 46/73 (63.01%), Query Frame = 1

Query:   46 IKRLKEDTDLSVDVVSIAPSKPVNSKYHTLFLARHDYIDWVDYQF--YFETLKSKDEFKNIFLSLSDVYGSKK 258
            I  LK+D DL+++VVSIAPS+  +S Y  L+ A+ DYI+WVDYQF    + + + D F  IF SL   Y   K
Sbjct:  149 ITELKKDDDLNINVVSIAPSENNSSHYQKLYNAKKDYINWVDYQFSNQQKPVSTDDAFVEIFKSLEKDYHPHK 221

HSP 2 Score: 60.077 bits (144), Expect = 8.003e-20
Identity = 34/70 (48.57%), Postives = 43/70 (61.43%), Query Frame = 2

Query:  257 KLLAGASTDPDDA--GKISREDFLEGVIDLLDAESLRGIFIWNANDSATPPPNG-KPFSFEIKAQELLTK 457
            K+L G STDP D    KI+R+ F+ G   L+   SL G+F WNANDS  P  +G KPF  E+  Q+LL K
Sbjct:  221 KVLPGFSTDPLDTKHNKITRDIFIGGCTRLVQTFSLPGVFFWNANDSVIPKRDGDKPFIVELTLQQLLAK 290

[Close]

BLAST of GR399833 vs. TrEMBL
Match: Q08883_9FABA (Narbonin OS=Vicia pannonica PE=3 SV=2)

HSP 1 Score: 59.3066 bits (142), Expect = 2.440e-18
Identity = 33/73 (45.21%), Postives = 46/73 (63.01%), Query Frame = 1

Query:   46 IKRLKEDTDLSVDVVSIAPSKPVNSKYHTLFLARHDYIDWVDYQF--YFETLKSKDEFKNIFLSLSDVYGSKK 258
            I+ LK+D DL++DVVSIAPS+   S    L+ A  DYI+WVDYQF    + + + D F +I+ SL   Y + K
Sbjct:  150 IRELKKDDDLNIDVVSIAPSENNQSSNQKLYNANTDYINWVDYQFSNQVKPVTTVDAFVDIYNSLVKDYDAGK 222

HSP 2 Score: 57.7658 bits (138), Expect = 2.440e-18
Identity = 32/70 (45.71%), Postives = 42/70 (60.00%), Query Frame = 2

Query:  257 KLLAGASTDPDDAG--KISREDFLEGVIDLLDAESLRGIFIWNANDSATPP-PNGKPFSFEIKAQELLTK 457
            K+L G +T+P D    K +R+ F+ G   LL   SL G+FIWNANDS  P   +  PF  E+K Q+LL K
Sbjct:  222 KVLPGFNTEPLDIKDTKTTRDTFIRGCTKLLQTSSLPGVFIWNANDSVIPQRDDDTPFIVELKLQQLLAK 291

[Close]

BLAST of GR399833 vs. TrEMBL
Match: Q41663_VICFA (Nodulin homologous to narbonin OS=Vicia faba PE=2 SV=1)

HSP 1 Score: 57.3806 bits (137), Expect = 9.648e-17
Identity = 32/73 (43.84%), Postives = 44/73 (60.27%), Query Frame = 1

Query:   46 IKRLKEDTDLSVDVVSIAPSKPVNSKYHTLFLARHDYIDWVDYQF--YFETLKSKDEFKNIFLSLSDVYGSKK 258
            I+ LK++ DL++ VVSIAPS+   S YH L+ A  D I+WVDYQF      + + D F +I+ SL   Y   K
Sbjct:  148 IRELKKERDLNIHVVSIAPSENNASSYHKLYNATRDDINWVDYQFSNQLNPVSTYDAFVDIYKSLVKDYHPHK 220

HSP 2 Score: 54.299 bits (129), Expect = 9.648e-17
Identity = 33/69 (47.83%), Postives = 39/69 (56.52%), Query Frame = 2

Query:  257 KLLAGASTDPDDA--GKISREDFLEGVIDLLDAESLRGIFIWNANDSATPPPNGKPFSFEIKAQELLTK 457
            K+L G STDPDD    KI+R+ FL G   L    SL G+F WNANDS       +PF  E   +ELL K
Sbjct:  220 KVLPGFSTDPDDNMNTKITRDIFLGGCTKLKQTSSLPGVFFWNANDSNN---GDEPFQAEHVLEELLAK 285

[Close]

BLAST of GR399833 vs. TrEMBL
Match: Q39486_CANEN (Putative narbonin OS=Canavalia ensiformis PE=2 SV=1)

HSP 1 Score: 53.9138 bits (128), Expect = 2.247e-15
Identity = 32/73 (43.84%), Postives = 43/73 (58.90%), Query Frame = 1

Query:   46 IKRLKEDTDLSVDVVSIAPSKPVNSKYHTLFLARHDYIDWVDYQF--YFETLKSKDEFKNIFLSLSDVYGSKK 258
            I  LK D DL++ VVSIAPS+   S Y  L+ A  DYI+ VDYQF      + ++D F +I+ SL   Y + K
Sbjct:  149 ITELKNDDDLNIQVVSIAPSENNASSYLNLYNANPDYINLVDYQFSNQLNPVSTEDAFVDIYKSLVKDYFTHK 221

HSP 2 Score: 53.1434 bits (126), Expect = 2.247e-15
Identity = 32/69 (46.38%), Postives = 39/69 (56.52%), Query Frame = 2

Query:  257 KLLAGASTDPDDAG--KISREDFLEGVIDLLDAESLRGIFIWNANDSATPPPNGKPFSFEIKAQELLTK 457
            K+L G STDP D    KI+R+ F+ G   L    SL G+F WNANDS       KPF  E+  Q+LL K
Sbjct:  221 KVLPGFSTDPLDNTNTKITRDIFIGGCTKLKQNSSLPGVFFWNANDSNN---GDKPFKVELTLQQLLAK 286

[Close]

BLAST of GR399833 vs. TrEMBL
Match: Q41661_VICFA (Putative narbonin-like 2S protein OS=Vicia faba PE=2 SV=1)

HSP 1 Score: 53.9138 bits (128), Expect = 2.247e-15
Identity = 32/73 (43.84%), Postives = 43/73 (58.90%), Query Frame = 1

Query:   46 IKRLKEDTDLSVDVVSIAPSKPVNSKYHTLFLARHDYIDWVDYQF--YFETLKSKDEFKNIFLSLSDVYGSKK 258
            I  LK D DL++ VVSIAPS+   S Y  L+ A  DYI+ VDYQF      + ++D F +I+ SL   Y + K
Sbjct:  149 ITELKNDDDLNIQVVSIAPSENNASSYLNLYNANPDYINLVDYQFSNQLNPVSTEDAFVDIYKSLVKDYFTHK 221

HSP 2 Score: 53.1434 bits (126), Expect = 2.247e-15
Identity = 32/69 (46.38%), Postives = 39/69 (56.52%), Query Frame = 2

Query:  257 KLLAGASTDPDDAG--KISREDFLEGVIDLLDAESLRGIFIWNANDSATPPPNGKPFSFEIKAQELLTK 457
            K+L G STDP D    KI+R+ F+ G   L    SL G+F WNANDS       KPF  E+  Q+LL K
Sbjct:  221 KVLPGFSTDPLDNTNTKITRDIFIGGCTKLKQNSSLPGVFFWNANDSNN---GDKPFKVELTLQQLLAK 286

The following BLAST results are available for this feature:

BLAST of GR399833 vs. TrEMBL

BLAST of GR399833 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
Q41680_9FABA	2.450e-22	52.05	Narbonin OS=Vicia pannonica PE=2 SV=2	[more]
Q41679_9FABA	4.147e-22	51.39	Narbonin (Fragment) OS=Vicia pannonica PE=2 SV=1	[more]
Q39888_SOYBN	9.137e-22	51.39	Putative narbonin OS=Glycine max PE=3 SV=1	[more]
Q7DLM0_VICNA	8.003e-20	46.58	Narbonin OS=Vicia narbonensis PE=3 SV=1	[more]
Q41675_VICNA	8.003e-20	46.58	Narbonin OS=Vicia narbonensis PE=2 SV=2	[more]
Q08884_VICNA	8.003e-20	46.58	Narbonin OS=Vicia narbonensis PE=1 SV=2	[more]
Q08883_9FABA	2.440e-18	45.21	Narbonin OS=Vicia pannonica PE=3 SV=2	[more]
Q41663_VICFA	9.648e-17	43.84	Nodulin homologous to narbonin OS=Vicia faba PE=2 ...	[more]
Q39486_CANEN	2.247e-15	43.84	Putative narbonin OS=Canavalia ensiformis PE=2 SV=...	[more]
Q41661_VICFA	2.247e-15	43.84	Putative narbonin-like 2S protein OS=Vicia faba PE...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 3..15 score
None	No IPR available	SEG	seg	seg	coord: 37..48 score

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>GR399833 ID=GR399833; Name=GR399833; organism=Cicer arietinum; type=EST; length=734bp
ATCACATCCGATGGTGGAGATTTCTCTTCTGGTGTGGGGGATGTTATAAA
GAGACTCAAGGAGGATACTGATCTATCTGTCGATGTGGTTTCCATTGCTC
CATCTAAACCAGTCAATTCCAAGTACCATACACTATTTTTGGCTCGCCAT
GATTATATTGATTGGGTGGACTATCAGTTCTACTTTGAGACTCTCAAATC
AAAGGATGAGTTTAAAAATATCTTTCTTAGTCTATCAGACGTCTACGGTT
CTAAAAAAACTTCTGGCAGGAGCTAGTACTGATCCAGATGACGCAGGTAA
AATTTCACGAGAAGACTTCCTTGAGGGTGTTATCGATCTCCTCGATGCTG
AATCACTTCGTGGCATTTTTATTTGGAATGCTAATGACTCTGCAACCCCT
CCACCCAACGGAAAACCTTTCTCCTTTGAGATAAAGGCACAAGAACTCCT
CACTAAATCAGGATAATTAATTACTATCTCGCTATCTAGCTACCTAGTAG
TTATTTTAAATGCATTCTACGGGTCATTAATAAATAATAGTTAGATCTTG
TCATGAAAAAGTTTGTTTCTTATATCTTCTAAATAAGACCCCGACTGGCT
TGAATGAATGATTTTACTATTGTTAAACATAAATAATAATTAATAATATA
AAAGTACTTTCGCCGTTAACTCTTGTTTAACCATTAGTAATTTCTTGCCC
CTTTAGTTCCTCATATATAAATTCCCCAATTCTT

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