GR404261
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GR404261 vs. TrEMBL
Match: B9HBY5_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_802251 PE=4 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 5.679e-20 Identity = 43/55 (78.18%), Postives = 51/55 (92.73%), Query Frame = -3 Query: 149 CSSAHGVGPSLAIFDPVRNGKLDCACIYPSPLHSREQIQGIVDDMKRILVNGCKS 313 CSS HGVGPS+AIFD VRNG+LDCAC+YPSPLHSR+Q+Q ++DDMKRILV+GC S Sbjct: 419 CSSVHGVGPSVAIFDTVRNGRLDCACVYPSPLHSRDQMQKLIDDMKRILVDGCGS 473
BLAST of GR404261 vs. TrEMBL
Match: B9SWG5_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0293140 PE=4 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 2.158e-19 Identity = 41/56 (73.21%), Postives = 50/56 (89.29%), Query Frame = -3 Query: 146 CSSAHGVGPSLAIFDPVRNGKLDCACIYPSPLHSREQIQGIVDDMKRILVNGCKSE 313 C+S HGVGPSLA FD +RNG+LDCAC+YPSPLHSREQIQ ++DDMKRILV+ C ++ Sbjct: 413 CASVHGVGPSLAFFDTIRNGRLDCACVYPSPLHSREQIQKLIDDMKRILVDSCAND 468
BLAST of GR404261 vs. TrEMBL
Match: B9HBY4_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_561484 PE=4 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 1.546e-17 Identity = 37/54 (68.52%), Postives = 48/54 (88.89%), Query Frame = -3 Query: 152 CSSAHGVGPSLAIFDPVRNGKLDCACIYPSPLHSREQIQGIVDDMKRILVNGCK 313 C+SAHG+GPS+AIFD VR+G+LDC C+YPSPLHSREQ+Q +D+MK +LV GC+ Sbjct: 75 CASAHGIGPSIAIFDRVRDGRLDCVCVYPSPLHSREQMQEFIDNMKSVLVEGCR 128
BLAST of GR404261 vs. TrEMBL
Match: B9IIT5_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_576579 PE=4 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 3.445e-17 Identity = 36/53 (67.92%), Postives = 46/53 (86.79%), Query Frame = -3 Query: 155 CSSAHGVGPSLAIFDPVRNGKLDCACIYPSPLHSREQIQGIVDDMKRILVNGC 313 C+SAHG+GPS+AIFD +R+G+LDC C+YPSPLHSREQ+Q +D MK +LV GC Sbjct: 420 CASAHGIGPSIAIFDTIRDGRLDCVCVYPSPLHSREQMQEFIDSMKSVLVEGC 472
BLAST of GR404261 vs. TrEMBL
Match: D7TJ89_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_7.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00033869001 PE=4 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.309e-16 Identity = 37/53 (69.81%), Postives = 47/53 (88.68%), Query Frame = -3 Query: 155 CSSAHGVGPSLAIFDPVRNGKLDCACIYPSPLHSREQIQGIVDDMKRILVNGC 313 C SAHGVGPS+A+F +R+G+LDCAC+YPSPLHSREQ+ +VD MKR+LV+GC Sbjct: 385 CGSAHGVGPSIALFHTIRDGQLDCACVYPSPLHSREQMLELVDAMKRVLVDGC 437
BLAST of GR404261 vs. TrEMBL
Match: A5AIS5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_014691 PE=4 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.309e-16 Identity = 37/53 (69.81%), Postives = 47/53 (88.68%), Query Frame = -3 Query: 155 CSSAHGVGPSLAIFDPVRNGKLDCACIYPSPLHSREQIQGIVDDMKRILVNGC 313 C SAHGVGPS+A+F +R+G+LDCAC+YPSPLHSREQ+ +VD MKR+LV+GC Sbjct: 409 CGSAHGVGPSIALFHTIRDGQLDCACVYPSPLHSREQMLELVDAMKRVLVDGC 461
BLAST of GR404261 vs. TrEMBL
Match: D7TJ90_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_7.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00033870001 PE=4 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.225e-14 Identity = 33/51 (64.71%), Postives = 45/51 (88.24%), Query Frame = -3 Query: 161 CSSAHGVGPSLAIFDPVRNGKLDCACIYPSPLHSREQIQGIVDDMKRILVN 313 C+S HG+GPS+AIFD +R G LDCAC+YPSPLHSREQ++ ++ +MKR+LV+ Sbjct: 327 CASVHGIGPSIAIFDTIRGGMLDCACVYPSPLHSREQMEELLHNMKRLLVD 377
BLAST of GR404261 vs. TrEMBL
Match: A5AIS4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_014690 PE=4 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.225e-14 Identity = 33/51 (64.71%), Postives = 45/51 (88.24%), Query Frame = -3 Query: 161 CSSAHGVGPSLAIFDPVRNGKLDCACIYPSPLHSREQIQGIVDDMKRILVN 313 C+S HG+GPS+AIFD +R G LDCAC+YPSPLHSREQ++ ++ +MKR+LV+ Sbjct: 219 CASVHGIGPSIAIFDTIRGGMLDCACVYPSPLHSREQMEELLHNMKRLLVD 269
BLAST of GR404261 vs. TrEMBL
Match: Q9LXK3_ARATH (Putative uncharacterized protein F3C22_10 OS=Arabidopsis thaliana GN=F3C22_10 PE=4 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 1.600e-14 Identity = 35/55 (63.64%), Postives = 45/55 (81.82%), Query Frame = -3 Query: 149 CSSAHGVGPSLAIFDPVRNGKLDCACIYPSPLHSREQIQGIVDDMKRILVNGCKS 313 C+S HGVGPS+A+FD +R+GKLDCA +YPSPLHSREQ+ G++ MK IL+ G S Sbjct: 409 CASIHGVGPSVAVFDALRDGKLDCAFVYPSPLHSREQMDGLIQHMKTILLEGSAS 463
BLAST of GR404261 vs. TrEMBL
Match: Q94CE8_ARATH (Putative uncharacterized protein At3g52610 OS=Arabidopsis thaliana GN=At3g52610 PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 1.600e-14 Identity = 35/55 (63.64%), Postives = 45/55 (81.82%), Query Frame = -3 Query: 149 CSSAHGVGPSLAIFDPVRNGKLDCACIYPSPLHSREQIQGIVDDMKRILVNGCKS 313 C+S HGVGPS+A+FD +R+GKLDCA +YPSPLHSREQ+ G++ MK IL+ G S Sbjct: 419 CASIHGVGPSVAVFDALRDGKLDCAFVYPSPLHSREQMDGLIQHMKTILLEGSAS 473
BLAST of GR404261 vs. TAIR peptide
Match: AT3G52610.1 (| Symbols: | unknown protein; Has 68 Blast hits to 67 proteins in 21 species: Archae - 0; Bacteria - 11; Metazoa - 0; Fungi - 0; Plants - 55; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). | chr3:19510513-19512547 FORWARD LENGTH=475) HSP 1 Score: 82.4185 bits (202), Expect = 6.119e-17 Identity = 35/55 (63.64%), Postives = 45/55 (81.82%), Query Frame = -3 Query: 149 CSSAHGVGPSLAIFDPVRNGKLDCACIYPSPLHSREQIQGIVDDMKRILVNGCKS 313 C+S HGVGPS+A+FD +R+GKLDCA +YPSPLHSREQ+ G++ MK IL+ G S Sbjct: 419 CASIHGVGPSVAVFDALRDGKLDCAFVYPSPLHSREQMDGLIQHMKTILLEGSAS 473 The following BLAST results are available for this feature:
BLAST of GR404261 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl) Total hits: 10
BLAST of GR404261 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide) Total hits: 1
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GR404261 ID=GR404261; Name=GR404261; organism=Cicer arietinum; type=EST; length=315bpback to top |