GR406230

EST Overview
NameGR406230
Unique NameGR406230
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length298
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Homology
BLAST of GR406230 vs. TrEMBL
Match: B9SKX3_RICCO (Spotted leaf protein, putative OS=Ricinus communis GN=RCOM_1463270 PE=4 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 1.988e-17
Identity = 49/78 (62.82%), Postives = 60/78 (76.92%), Query Frame = -2
Query:   58 MAPMKKLLVLDSAKEALVNNPKGVESLVKMVFKVCNQECSESAVGILSIVCCDFGSAREEAIGAGVLTQLLFFLQSQC 291
            MA ++ LL LD+AKEA++NNP G+ +LVKMVF+V + E SESAV  L I+C D   AREEAI AGVLTQ+L  LQSQC
Sbjct:  300 MATIELLLELDTAKEAVINNPDGIGALVKMVFRVSDHEGSESAVRSLMILCGDSLQAREEAISAGVLTQVLLLLQSQC 377          
BLAST of GR406230 vs. TrEMBL
Match: A5C2F4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_011184 PE=4 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 2.198e-16
Identity = 45/80 (56.25%), Postives = 61/80 (76.25%), Query Frame = -2
Query:   58 LGMAPMKKLLVLDSAKEALVNNPKGVESLVKMVFKVCNQECSESAVGILSIVCCDFGSAREEAIGAGVLTQLLFFLQSQC 297
            L +A ++ LL ++S +EA++NNP GV++LVKM FKV + + SE+AV  L ++C D   AREEAI AGVL+QLLF LQSQC
Sbjct:  290 LAIAVLEVLLGVESGREAVLNNPNGVKALVKMTFKVSDHQGSENAVSSLMVLCTDSLRAREEAISAGVLSQLLFLLQSQC 369          
BLAST of GR406230 vs. TrEMBL
Match: C5Y8R7_SORBI (Putative uncharacterized protein Sb06g017230 OS=Sorghum bicolor GN=Sb06g017230 PE=4 SV=1)

HSP 1 Score: 60.8474 bits (146), Expect = 4.908e-8
Identity = 34/80 (42.50%), Postives = 49/80 (61.25%), Query Frame = -2
Query:   55 MAPMKKLLVLDSAKEALVNNPKGVESLVKMVFKVCNQ-ECSESAVGILSIVCCDFGSAREEAIGAGVLTQLLFFLQSQCG 291
            +A ++ L   ++ + A+   P  V +LV+ VF + +  E SE AV  L  VC +  +AR EA GAGV+TQ+L  LQSQCG
Sbjct:  302 LAALEALAASEAGRRAVAREPGAVRALVRHVFLMSSSNEGSEHAVAALLAVCRESRAARSEAAGAGVVTQVLLLLQSQCG 381          
BLAST of GR406230 vs. TrEMBL
Match: Q7XV59_ORYSJ (OSJNBa0006B20.11 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0006B20.11 PE=4 SV=2)

HSP 1 Score: 57.3806 bits (137), Expect = 5.426e-7
Identity = 33/80 (41.25%), Postives = 48/80 (60.00%), Query Frame = -2
Query:   55 MAPMKKLLVLDSAKEALVNNPKGVESLVKMVFKV-CNQECSESAVGILSIVCCDFGSAREEAIGAGVLTQLLFFLQSQCG 291
            +A ++ L   ++ + A+   P G  +LV+ VF +  + + SE AV  L  VC +  +AR EA GAGV+T LL  LQSQCG
Sbjct:  330 LAAVEALAASEAGRMAVARAPGGTRALVRHVFMMNSSNDGSEHAVAALLAVCRESRAARSEAAGAGVVTLLLLLLQSQCG 409          
BLAST of GR406230 vs. TrEMBL
Match: Q01I67_ORYSA (H0315A08.5 protein OS=Oryza sativa GN=H0315A08.5 PE=4 SV=1)

HSP 1 Score: 57.3806 bits (137), Expect = 5.426e-7
Identity = 33/80 (41.25%), Postives = 48/80 (60.00%), Query Frame = -2
Query:   55 MAPMKKLLVLDSAKEALVNNPKGVESLVKMVFKV-CNQECSESAVGILSIVCCDFGSAREEAIGAGVLTQLLFFLQSQCG 291
            +A ++ L   ++ + A+   P G  +LV+ VF +  + + SE AV  L  VC +  +AR EA GAGV+T LL  LQSQCG
Sbjct:  330 LAAVEALAASEAGRMAVARAPGGTRALVRHVFMMNSSNDGSEHAVAALLAVCRESRAARSEAAGAGVVTLLLLLLQSQCG 409          
BLAST of GR406230 vs. TrEMBL
Match: B8AU19_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_15987 PE=4 SV=1)

HSP 1 Score: 57.3806 bits (137), Expect = 5.426e-7
Identity = 33/80 (41.25%), Postives = 48/80 (60.00%), Query Frame = -2
Query:   55 MAPMKKLLVLDSAKEALVNNPKGVESLVKMVFKV-CNQECSESAVGILSIVCCDFGSAREEAIGAGVLTQLLFFLQSQCG 291
            +A ++ L   ++ + A+   P G  +LV+ VF +  + + SE AV  L  VC +  +AR EA GAGV+T LL  LQSQCG
Sbjct:  308 LAAVEALAASEAGRMAVARAPGGTRALVRHVFMMNSSNDGSEHAVAALLAVCRESRAARSEAAGAGVVTLLLLLLQSQCG 387          
The following BLAST results are available for this feature:
BLAST of GR406230 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 6
Match NameE-valueIdentityDescription
B9SKX3_RICCO1.988e-1762.82Spotted leaf protein, putative OS=Ricinus communis... [more]
A5C2F4_VITVI2.198e-1656.25Putative uncharacterized protein OS=Vitis vinifera... [more]
C5Y8R7_SORBI4.908e-842.50Putative uncharacterized protein Sb06g017230 OS=So... [more]
Q7XV59_ORYSJ5.426e-741.25OSJNBa0006B20.11 protein OS=Oryza sativa subsp. ja... [more]
Q01I67_ORYSA5.426e-741.25H0315A08.5 protein OS=Oryza sativa GN=H0315A08.5 P... [more]
B8AU19_ORYSI5.426e-741.25Putative uncharacterized protein OS=Oryza sativa s... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 82..98
score

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GR406230 ID=GR406230; Name=GR406230; organism=Cicer arietinum; type=EST; length=298bp
CCACTTAAATCTGAGCAACTTAAGCAATAGTCTAGCCTTAGTTTTAGTTT
TAGTACCACACTGACTCTGCAGAAAAAACAACAACTGAGTCAAAACACCA
GCTCCAATAGCTTCCTCTCTTGCACTCCCAAAATCACAACAAACAATTGA
AAGTATCCCAACAGCACTCTCACTACACTCTTGATTACAAACCTTGAAAA
CCATCTTCACCAAACTTTCAACACCCTTTGGATTATTCACCAATGCCTCT
TTAGCACTATCTAGTACCAAAAGTTTCTTCATTGGTGCCATTCCTAAA
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