GR406274

EST Overview
NameGR406274
Unique NameGR406274
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length335
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
KEGG analysis for Cicer arietinum unigene v12011-01-05
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Homology
BLAST of GR406274 vs. TrEMBL
Match: D7UAQ5_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_15.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00014783001 PE=4 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 3.825e-24
Identity = 54/76 (71.05%), Postives = 59/76 (77.63%), Query Frame = -1
Query:   45 ACDINNDMSRKIAWMTDVATAIIPSDPMITMHVRPIFEQVYQILSHQRSLPTMTGADLSSIRLLLHVINFMLTTCK 272
            ACDIN D  RK+ WMTDVA  I P DPMI MHVRPIF+QVYQIL+H RSLPT T +   SIRLL+HVIN ML TCK
Sbjct: 1195 ACDINKDTPRKLGWMTDVAVVINPGDPMIAMHVRPIFDQVYQILNHHRSLPTTTSSQGQSIRLLMHVINSMLMTCK 1270          
BLAST of GR406274 vs. TrEMBL
Match: D7SSY9_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_455.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00006976001 PE=4 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 3.825e-24
Identity = 52/76 (68.42%), Postives = 64/76 (84.21%), Query Frame = -1
Query:   45 ACDINNDMSRKIAWMTDVATAIIPSDPMITMHVRPIFEQVYQILSHQRSLPTMTGADLSSIRLLLHVINFMLTTCK 272
            ACDI+ +  RK+AWMTDVA AI P+DPMI +HVRPIFEQVYQIL HQR+LPT + A+ SSIRLL+HV+N +L +CK
Sbjct: 1096 ACDISKETPRKLAWMTDVAVAINPADPMIALHVRPIFEQVYQILGHQRNLPTTSAAEASSIRLLMHVVNSVLLSCK 1171          
BLAST of GR406274 vs. TrEMBL
Match: D7U722_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_2472.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00006136001 PE=4 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 2.479e-23
Identity = 51/76 (67.11%), Postives = 62/76 (81.58%), Query Frame = -1
Query:   45 ACDINNDMSRKIAWMTDVATAIIPSDPMITMHVRPIFEQVYQILSHQRSLPTMTGADLSSIRLLLHVINFMLTTCK 272
            ACDI+ +  RK+AWMTDVA AI P DPMI +HVRPIFEQVYQIL HQR+ PT + A+ SSIRLL+HV+N +L +CK
Sbjct:   78 ACDISKETPRKLAWMTDVAVAINPGDPMIALHVRPIFEQVYQILGHQRNQPTTSAAEASSIRLLMHVVNSVLLSCK 153          
BLAST of GR406274 vs. TrEMBL
Match: A5BIR1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_038739 PE=4 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 2.479e-23
Identity = 51/76 (67.11%), Postives = 62/76 (81.58%), Query Frame = -1
Query:   45 ACDINNDMSRKIAWMTDVATAIIPSDPMITMHVRPIFEQVYQILSHQRSLPTMTGADLSSIRLLLHVINFMLTTCK 272
            ACDI+ +  RK+AWMTDVA AI P DPMI +HVRPIFEQVYQIL HQR+ PT + A+ SSIRLL+HV+N +L +CK
Sbjct: 1329 ACDISKETPRKLAWMTDVAVAINPGDPMIALHVRPIFEQVYQILGHQRNQPTTSAAEASSIRLLMHVVNSVLLSCK 1404          
BLAST of GR406274 vs. TrEMBL
Match: B9SXA2_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0267750 PE=4 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 1.607e-22
Identity = 50/75 (66.67%), Postives = 62/75 (82.67%), Query Frame = -1
Query:   48 ACDINNDMSRKIAWMTDVATAIIPSDPMITMHVRPIFEQVYQILSHQRSLPTMTGADLSSIRLLLHVINFMLTTC 272
            ACD++ D +RK+AWMTDVA AI P+D MI+MHVRPIFEQVYQIL   R+ P +TG DLS+IR+L+HVIN +L TC
Sbjct: 1270 ACDVSKDTARKLAWMTDVAAAINPADQMISMHVRPIFEQVYQILHQLRNSPAVTGTDLSTIRVLMHVINSVLVTC 1344          
BLAST of GR406274 vs. TrEMBL
Match: B9SGV7_RICCO (Nucleotide binding protein, putative OS=Ricinus communis GN=RCOM_0820360 PE=4 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 6.106e-22
Identity = 48/76 (63.16%), Postives = 63/76 (82.89%), Query Frame = -1
Query:   45 ACDINNDMSRKIAWMTDVATAIIPSDPMITMHVRPIFEQVYQILSHQRSLPTMTGADLSSIRLLLHVINFMLTTCK 272
            ACDIN +  RK+AWMT+VA AI P+DPMI MHVRPI +QVYQIL HQR+L T++ ++ +SIRLL+HVIN ++ +CK
Sbjct: 1365 ACDINKETPRKLAWMTEVAVAINPADPMIAMHVRPILDQVYQILRHQRNLATISASEAASIRLLMHVINSVIMSCK 1440          
BLAST of GR406274 vs. TrEMBL
Match: B9N3W0_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_811288 PE=4 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 2.320e-21
Identity = 49/76 (64.47%), Postives = 62/76 (81.58%), Query Frame = -1
Query:   45 ACDINNDMSRKIAWMTDVATAIIPSDPMITMHVRPIFEQVYQILSHQRSLPTMTGADLSSIRLLLHVINFMLTTCK 272
            ACD +N+ SRK+AWMTDVA AI P+DPMI MHV PIF+QVYQI+ HQRSLP+ + ++ S IR+LL VIN +L +CK
Sbjct: 1342 ACDFSNETSRKLAWMTDVAAAINPTDPMIAMHVGPIFDQVYQIVVHQRSLPSTSASEASGIRVLLVVINSVLRSCK 1417          
BLAST of GR406274 vs. TrEMBL
Match: Q9LTT9_ARATH (Genomic DNA, chromosome 3, P1 clone: MDC11 OS=Arabidopsis thaliana GN=At3g13290 PE=1 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 8.818e-21
Identity = 48/76 (63.16%), Postives = 60/76 (78.95%), Query Frame = -1
Query:   45 ACDINNDMSRKIAWMTDVATAIIPSDPMITMHVRPIFEQVYQILSHQRSLPTMTGADLSSIRLLLHVINFMLTTCK 272
            ACDI+ D SRK+ WMTDV TAI PSD MI +H RPIFEQVYQIL H R+ P   G+D+S++RL++HVIN +L +CK
Sbjct: 1268 ACDISTDTSRKLGWMTDVVTAINPSDQMIAVHARPIFEQVYQILHHHRNAP---GSDVSAVRLIMHVINSLLMSCK 1340          
BLAST of GR406274 vs. TrEMBL
Match: Q9LTT8_ARATH (Gb|AAF53066.1 OS=Arabidopsis thaliana GN=At3g13300 PE=1 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 8.818e-21
Identity = 50/76 (65.79%), Postives = 59/76 (77.63%), Query Frame = -1
Query:   45 ACDINNDMSRKIAWMTDVATAIIPSDPMITMHVRPIFEQVYQILSHQRSLPTMTGADLSSIRLLLHVINFMLTTCK 272
            ACDI+ D SRK+AWMTDV  AI PSD MI +H RPIFEQVYQIL H R+ P   G+D+S+IRL++HVIN ML  CK
Sbjct: 1272 ACDISKDTSRKLAWMTDVVAAINPSDQMIAVHARPIFEQVYQILHHHRNAP---GSDVSAIRLIMHVINSMLMGCK 1344          
BLAST of GR406274 vs. TrEMBL
Match: Q8L7N9_ARATH (Putative uncharacterized protein At3g13300 OS=Arabidopsis thaliana GN=At3g13300 PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 8.818e-21
Identity = 50/76 (65.79%), Postives = 59/76 (77.63%), Query Frame = -1
Query:   45 ACDINNDMSRKIAWMTDVATAIIPSDPMITMHVRPIFEQVYQILSHQRSLPTMTGADLSSIRLLLHVINFMLTTCK 272
            ACDI+ D SRK+AWMTDV  AI PSD MI +H RPIFEQVYQIL H R+ P   G+D+S+IRL++HVIN ML  CK
Sbjct: 1272 ACDISKDTSRKLAWMTDVVAAINPSDQMIAVHARPIFEQVYQILHHHRNAP---GSDVSAIRLIMHVINSMLMGCK 1344          
BLAST of GR406274 vs. TAIR peptide
Match: AT3G13300.2 (| Symbols: VCS | Transducin/WD40 repeat-like superfamily protein | chr3:4304085-4309949 FORWARD LENGTH=1309)

HSP 1 Score: 103.219 bits (256), Expect = 3.399e-23
Identity = 50/76 (65.79%), Postives = 59/76 (77.63%), Query Frame = -1
Query:   45 ACDINNDMSRKIAWMTDVATAIIPSDPMITMHVRPIFEQVYQILSHQRSLPTMTGADLSSIRLLLHVINFMLTTCK 272
            ACDI+ D SRK+AWMTDV  AI PSD MI +H RPIFEQVYQIL H R+ P   G+D+S+IRL++HVIN ML  CK
Sbjct: 1237 ACDISKDTSRKLAWMTDVVAAINPSDQMIAVHARPIFEQVYQILHHHRNAP---GSDVSAIRLIMHVINSMLMGCK 1309          
BLAST of GR406274 vs. TAIR peptide
Match: AT3G13290.1 (| Symbols: VCR | varicose-related | chr3:4297529-4303113 FORWARD LENGTH=1340)

HSP 1 Score: 103.219 bits (256), Expect = 3.399e-23
Identity = 48/76 (63.16%), Postives = 60/76 (78.95%), Query Frame = -1
Query:   45 ACDINNDMSRKIAWMTDVATAIIPSDPMITMHVRPIFEQVYQILSHQRSLPTMTGADLSSIRLLLHVINFMLTTCK 272
            ACDI+ D SRK+ WMTDV TAI PSD MI +H RPIFEQVYQIL H R+ P   G+D+S++RL++HVIN +L +CK
Sbjct: 1268 ACDISTDTSRKLGWMTDVVTAINPSDQMIAVHARPIFEQVYQILHHHRNAP---GSDVSAVRLIMHVINSLLMSCK 1340          
BLAST of GR406274 vs. TAIR peptide
Match: AT3G13300.1 (| Symbols: VCS | Transducin/WD40 repeat-like superfamily protein | chr3:4304085-4309949 FORWARD LENGTH=1344)

HSP 1 Score: 103.219 bits (256), Expect = 3.399e-23
Identity = 50/76 (65.79%), Postives = 59/76 (77.63%), Query Frame = -1
Query:   45 ACDINNDMSRKIAWMTDVATAIIPSDPMITMHVRPIFEQVYQILSHQRSLPTMTGADLSSIRLLLHVINFMLTTCK 272
            ACDI+ D SRK+AWMTDV  AI PSD MI +H RPIFEQVYQIL H R+ P   G+D+S+IRL++HVIN ML  CK
Sbjct: 1272 ACDISKDTSRKLAWMTDVVAAINPSDQMIAVHARPIFEQVYQILHHHRNAP---GSDVSAIRLIMHVINSMLMGCK 1344          
The following BLAST results are available for this feature:
BLAST of GR406274 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
D7UAQ5_VITVI3.825e-2471.05Whole genome shotgun sequence of line PN40024, sca... [more]
D7SSY9_VITVI3.825e-2468.42Whole genome shotgun sequence of line PN40024, sca... [more]
D7U722_VITVI2.479e-2367.11Whole genome shotgun sequence of line PN40024, sca... [more]
A5BIR1_VITVI2.479e-2367.11Putative uncharacterized protein OS=Vitis vinifera... [more]
B9SXA2_RICCO1.607e-2266.67Putative uncharacterized protein OS=Ricinus commun... [more]
B9SGV7_RICCO6.106e-2263.16Nucleotide binding protein, putative OS=Ricinus co... [more]
B9N3W0_POPTR2.320e-2164.47Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
Q9LTT9_ARATH8.818e-2163.16Genomic DNA, chromosome 3, P1 clone: MDC11 OS=Arab... [more]
Q9LTT8_ARATH8.818e-2165.79Gb|AAF53066.1 OS=Arabidopsis thaliana GN=At3g13300... [more]
Q8L7N9_ARATH8.818e-2165.79Putative uncharacterized protein At3g13300 OS=Arab... [more]
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BLAST of GR406274 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 3
Match NameE-valueIdentityDescription
AT3G13300.23.399e-2365.79| Symbols: VCS | Transducin/WD40 repeat-like super... [more]
AT3G13290.13.399e-2363.16| Symbols: VCR | varicose-related | chr3:4297529-4... [more]
AT3G13300.13.399e-2365.79| Symbols: VCS | Transducin/WD40 repeat-like super... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR15598AUTOANTIGEN RCD8coord: 1..97
score: 5.9
NoneNo IPR availableSEGsegsegcoord: 5..21
score

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GR406274 ID=GR406274; Name=GR406274; organism=Cicer arietinum; type=EST; length=335bp
AGAGTTCATAAGACAAATTTGCACATTTCTAGAATGAAAAATCATTTACA
TGTCGTAAGCATAAAGTTGATGACATGCAATAAAAGACGGATACTTGAGA
GATCAGCTCCAGTCATTGTAGGTAAGCTACGTTGATGACTCAGTATCTGA
TACACTTGTTCGAAAATGGGTCGCACGTGCATTGTTATCATGGGATCCGA
GGGAATTATGGCAGTAGCCACGTCAGTCATCCATGCGATCTTTCGGGACA
TGTCGTTGTTGATATCACACGCCAACTGTTGCAGAAGTGAAAGCACTACA
CCTTGGCTTAAAGGAAGAGGAACCATTGAAAGAAG
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