GR406274
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GR406274 vs. TrEMBL
Match: D7UAQ5_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_15.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00014783001 PE=4 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 3.825e-24 Identity = 54/76 (71.05%), Postives = 59/76 (77.63%), Query Frame = -1 Query: 45 ACDINNDMSRKIAWMTDVATAIIPSDPMITMHVRPIFEQVYQILSHQRSLPTMTGADLSSIRLLLHVINFMLTTCK 272 ACDIN D RK+ WMTDVA I P DPMI MHVRPIF+QVYQIL+H RSLPT T + SIRLL+HVIN ML TCK Sbjct: 1195 ACDINKDTPRKLGWMTDVAVVINPGDPMIAMHVRPIFDQVYQILNHHRSLPTTTSSQGQSIRLLMHVINSMLMTCK 1270
BLAST of GR406274 vs. TrEMBL
Match: D7SSY9_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_455.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00006976001 PE=4 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 3.825e-24 Identity = 52/76 (68.42%), Postives = 64/76 (84.21%), Query Frame = -1 Query: 45 ACDINNDMSRKIAWMTDVATAIIPSDPMITMHVRPIFEQVYQILSHQRSLPTMTGADLSSIRLLLHVINFMLTTCK 272 ACDI+ + RK+AWMTDVA AI P+DPMI +HVRPIFEQVYQIL HQR+LPT + A+ SSIRLL+HV+N +L +CK Sbjct: 1096 ACDISKETPRKLAWMTDVAVAINPADPMIALHVRPIFEQVYQILGHQRNLPTTSAAEASSIRLLMHVVNSVLLSCK 1171
BLAST of GR406274 vs. TrEMBL
Match: D7U722_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_2472.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00006136001 PE=4 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 2.479e-23 Identity = 51/76 (67.11%), Postives = 62/76 (81.58%), Query Frame = -1 Query: 45 ACDINNDMSRKIAWMTDVATAIIPSDPMITMHVRPIFEQVYQILSHQRSLPTMTGADLSSIRLLLHVINFMLTTCK 272 ACDI+ + RK+AWMTDVA AI P DPMI +HVRPIFEQVYQIL HQR+ PT + A+ SSIRLL+HV+N +L +CK Sbjct: 78 ACDISKETPRKLAWMTDVAVAINPGDPMIALHVRPIFEQVYQILGHQRNQPTTSAAEASSIRLLMHVVNSVLLSCK 153
BLAST of GR406274 vs. TrEMBL
Match: A5BIR1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_038739 PE=4 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 2.479e-23 Identity = 51/76 (67.11%), Postives = 62/76 (81.58%), Query Frame = -1 Query: 45 ACDINNDMSRKIAWMTDVATAIIPSDPMITMHVRPIFEQVYQILSHQRSLPTMTGADLSSIRLLLHVINFMLTTCK 272 ACDI+ + RK+AWMTDVA AI P DPMI +HVRPIFEQVYQIL HQR+ PT + A+ SSIRLL+HV+N +L +CK Sbjct: 1329 ACDISKETPRKLAWMTDVAVAINPGDPMIALHVRPIFEQVYQILGHQRNQPTTSAAEASSIRLLMHVVNSVLLSCK 1404
BLAST of GR406274 vs. TrEMBL
Match: B9SXA2_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0267750 PE=4 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 1.607e-22 Identity = 50/75 (66.67%), Postives = 62/75 (82.67%), Query Frame = -1 Query: 48 ACDINNDMSRKIAWMTDVATAIIPSDPMITMHVRPIFEQVYQILSHQRSLPTMTGADLSSIRLLLHVINFMLTTC 272 ACD++ D +RK+AWMTDVA AI P+D MI+MHVRPIFEQVYQIL R+ P +TG DLS+IR+L+HVIN +L TC Sbjct: 1270 ACDVSKDTARKLAWMTDVAAAINPADQMISMHVRPIFEQVYQILHQLRNSPAVTGTDLSTIRVLMHVINSVLVTC 1344
BLAST of GR406274 vs. TrEMBL
Match: B9SGV7_RICCO (Nucleotide binding protein, putative OS=Ricinus communis GN=RCOM_0820360 PE=4 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 6.106e-22 Identity = 48/76 (63.16%), Postives = 63/76 (82.89%), Query Frame = -1 Query: 45 ACDINNDMSRKIAWMTDVATAIIPSDPMITMHVRPIFEQVYQILSHQRSLPTMTGADLSSIRLLLHVINFMLTTCK 272 ACDIN + RK+AWMT+VA AI P+DPMI MHVRPI +QVYQIL HQR+L T++ ++ +SIRLL+HVIN ++ +CK Sbjct: 1365 ACDINKETPRKLAWMTEVAVAINPADPMIAMHVRPILDQVYQILRHQRNLATISASEAASIRLLMHVINSVIMSCK 1440
BLAST of GR406274 vs. TrEMBL
Match: B9N3W0_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_811288 PE=4 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 2.320e-21 Identity = 49/76 (64.47%), Postives = 62/76 (81.58%), Query Frame = -1 Query: 45 ACDINNDMSRKIAWMTDVATAIIPSDPMITMHVRPIFEQVYQILSHQRSLPTMTGADLSSIRLLLHVINFMLTTCK 272 ACD +N+ SRK+AWMTDVA AI P+DPMI MHV PIF+QVYQI+ HQRSLP+ + ++ S IR+LL VIN +L +CK Sbjct: 1342 ACDFSNETSRKLAWMTDVAAAINPTDPMIAMHVGPIFDQVYQIVVHQRSLPSTSASEASGIRVLLVVINSVLRSCK 1417
BLAST of GR406274 vs. TrEMBL
Match: Q9LTT9_ARATH (Genomic DNA, chromosome 3, P1 clone: MDC11 OS=Arabidopsis thaliana GN=At3g13290 PE=1 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 8.818e-21 Identity = 48/76 (63.16%), Postives = 60/76 (78.95%), Query Frame = -1 Query: 45 ACDINNDMSRKIAWMTDVATAIIPSDPMITMHVRPIFEQVYQILSHQRSLPTMTGADLSSIRLLLHVINFMLTTCK 272 ACDI+ D SRK+ WMTDV TAI PSD MI +H RPIFEQVYQIL H R+ P G+D+S++RL++HVIN +L +CK Sbjct: 1268 ACDISTDTSRKLGWMTDVVTAINPSDQMIAVHARPIFEQVYQILHHHRNAP---GSDVSAVRLIMHVINSLLMSCK 1340
BLAST of GR406274 vs. TrEMBL
Match: Q9LTT8_ARATH (Gb|AAF53066.1 OS=Arabidopsis thaliana GN=At3g13300 PE=1 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 8.818e-21 Identity = 50/76 (65.79%), Postives = 59/76 (77.63%), Query Frame = -1 Query: 45 ACDINNDMSRKIAWMTDVATAIIPSDPMITMHVRPIFEQVYQILSHQRSLPTMTGADLSSIRLLLHVINFMLTTCK 272 ACDI+ D SRK+AWMTDV AI PSD MI +H RPIFEQVYQIL H R+ P G+D+S+IRL++HVIN ML CK Sbjct: 1272 ACDISKDTSRKLAWMTDVVAAINPSDQMIAVHARPIFEQVYQILHHHRNAP---GSDVSAIRLIMHVINSMLMGCK 1344
BLAST of GR406274 vs. TrEMBL
Match: Q8L7N9_ARATH (Putative uncharacterized protein At3g13300 OS=Arabidopsis thaliana GN=At3g13300 PE=2 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 8.818e-21 Identity = 50/76 (65.79%), Postives = 59/76 (77.63%), Query Frame = -1 Query: 45 ACDINNDMSRKIAWMTDVATAIIPSDPMITMHVRPIFEQVYQILSHQRSLPTMTGADLSSIRLLLHVINFMLTTCK 272 ACDI+ D SRK+AWMTDV AI PSD MI +H RPIFEQVYQIL H R+ P G+D+S+IRL++HVIN ML CK Sbjct: 1272 ACDISKDTSRKLAWMTDVVAAINPSDQMIAVHARPIFEQVYQILHHHRNAP---GSDVSAIRLIMHVINSMLMGCK 1344
BLAST of GR406274 vs. TAIR peptide
Match: AT3G13300.2 (| Symbols: VCS | Transducin/WD40 repeat-like superfamily protein | chr3:4304085-4309949 FORWARD LENGTH=1309) HSP 1 Score: 103.219 bits (256), Expect = 3.399e-23 Identity = 50/76 (65.79%), Postives = 59/76 (77.63%), Query Frame = -1 Query: 45 ACDINNDMSRKIAWMTDVATAIIPSDPMITMHVRPIFEQVYQILSHQRSLPTMTGADLSSIRLLLHVINFMLTTCK 272 ACDI+ D SRK+AWMTDV AI PSD MI +H RPIFEQVYQIL H R+ P G+D+S+IRL++HVIN ML CK Sbjct: 1237 ACDISKDTSRKLAWMTDVVAAINPSDQMIAVHARPIFEQVYQILHHHRNAP---GSDVSAIRLIMHVINSMLMGCK 1309
BLAST of GR406274 vs. TAIR peptide
Match: AT3G13290.1 (| Symbols: VCR | varicose-related | chr3:4297529-4303113 FORWARD LENGTH=1340) HSP 1 Score: 103.219 bits (256), Expect = 3.399e-23 Identity = 48/76 (63.16%), Postives = 60/76 (78.95%), Query Frame = -1 Query: 45 ACDINNDMSRKIAWMTDVATAIIPSDPMITMHVRPIFEQVYQILSHQRSLPTMTGADLSSIRLLLHVINFMLTTCK 272 ACDI+ D SRK+ WMTDV TAI PSD MI +H RPIFEQVYQIL H R+ P G+D+S++RL++HVIN +L +CK Sbjct: 1268 ACDISTDTSRKLGWMTDVVTAINPSDQMIAVHARPIFEQVYQILHHHRNAP---GSDVSAVRLIMHVINSLLMSCK 1340
BLAST of GR406274 vs. TAIR peptide
Match: AT3G13300.1 (| Symbols: VCS | Transducin/WD40 repeat-like superfamily protein | chr3:4304085-4309949 FORWARD LENGTH=1344) HSP 1 Score: 103.219 bits (256), Expect = 3.399e-23 Identity = 50/76 (65.79%), Postives = 59/76 (77.63%), Query Frame = -1 Query: 45 ACDINNDMSRKIAWMTDVATAIIPSDPMITMHVRPIFEQVYQILSHQRSLPTMTGADLSSIRLLLHVINFMLTTCK 272 ACDI+ D SRK+AWMTDV AI PSD MI +H RPIFEQVYQIL H R+ P G+D+S+IRL++HVIN ML CK Sbjct: 1272 ACDISKDTSRKLAWMTDVVAAINPSDQMIAVHARPIFEQVYQILHHHRNAP---GSDVSAIRLIMHVINSMLMGCK 1344 The following BLAST results are available for this feature:
BLAST of GR406274 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl) Total hits: 10
BLAST of GR406274 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide) Total hits: 3
InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GR406274 ID=GR406274; Name=GR406274; organism=Cicer arietinum; type=EST; length=335bpback to top |