GR407659
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GR407659 vs. TrEMBL
Match: D7UE30_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_304.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00005874001 PE=4 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.570e-12 Identity = 49/128 (38.28%), Postives = 66/128 (51.56%), Query Frame = 2 Query: 131 MPLSRFLLFSSKHRSTREXXXXXXXPRRVPSNTTQFVSYTKSTKHEETRHDLHPVFSAQSESSRSWGAYXXXXXXXXXXXXXXXX-HYNDERRAVPKGHQGDSRSRNIVSGPIIGGPFTLVNTEKQTV 511 M LSRF+L +SK S RR S SY++S+ + R D+H +++ S+SW A+ HYNDERR V KG QG++ RN V GPIIGGPFTL++ + Q V Sbjct: 1 MSLSRFVLSASKKCSIEALNPLRRFGRRFQSR-----SYSRSSWYGNGRPDIHTPVPVKTQGSQSWSAFIIPAAGLLGIAGGALFIHYNDERRVVLKG-QGNNSERNAVLGPIIGGPFTLIDAKHQLV 122
BLAST of GR407659 vs. TrEMBL
Match: D7M949_ARALY (Electron transport SCO1/SenC family protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_490756 PE=4 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 3.273e-10 Identity = 42/109 (38.53%), Postives = 53/109 (48.62%), Query Frame = 2 Query: 209 RRVPSNTTQFVSYTKSTKHEETRHDLHPVF---SAQSESSRSWGAYXXXXXXXXXXXXXXXXHYNDERRAVPKGHQGDSR-----SRNIVSGPIIGGPFTLVNTEKQTV 511 R PS Q +Y+KST+ D++P+F SSRS Y HYNDERRAVP+G + S V GPIIGGPFTL++TE + V Sbjct: 21 RSGPSKRIQSFNYSKSTRQGHEIPDVNPLFPMGGGTQASSRSRARYAVPAIVLGFAGFITFLHYNDERRAVPRGQASSNSGCGCGSNTTVKGPIIGGPFTLMSTENKIV 129
BLAST of GR407659 vs. TrEMBL
Match: Q8LAL0_ARATH (At4g39740 OS=Arabidopsis thaliana GN=At4g39740 PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 5.584e-10 Identity = 42/106 (39.62%), Postives = 50/106 (47.17%), Query Frame = 2 Query: 218 PSNTTQFVSYTKSTKHEETRHDLHPVF---SAQSESSRSWGAYXXXXXXXXXXXXXXXXHYNDERRAVPKGHQGDSR-----SRNIVSGPIIGGPFTLVNTEKQTV 511 PS Q V+Y KST+ D+ P+F SRS Y HYNDERRAVP+G + S V GPIIGGPFTLV+TE + V Sbjct: 24 PSKRIQSVNYCKSTRQGHEIPDVKPLFPTGGGTQAPSRSRARYAVPAILLGFAGFVGFLHYNDERRAVPRGQASSNSGCGCGSNTTVKGPIIGGPFTLVSTENKIV 129
BLAST of GR407659 vs. TrEMBL
Match: Q8GYI8_ARATH (Putative uncharacterized protein At4g39740/T19P19_130 OS=Arabidopsis thaliana GN=At4g39740/T19P19_130 PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 5.584e-10 Identity = 42/106 (39.62%), Postives = 50/106 (47.17%), Query Frame = 2 Query: 218 PSNTTQFVSYTKSTKHEETRHDLHPVF---SAQSESSRSWGAYXXXXXXXXXXXXXXXXHYNDERRAVPKGHQGDSR-----SRNIVSGPIIGGPFTLVNTEKQTV 511 PS Q V+Y KST+ D+ P+F SRS Y HYNDERRAVP+G + S V GPIIGGPFTLV+TE + V Sbjct: 24 PSKRIQSVNYCKSTRQGHEIPDVKPLFPTGGGTQAPSRSRARYAVPAILLGFAGFVGFLHYNDERRAVPRGQASSNSGCGCGSNTTVKGPIIGGPFTLVSTENKIV 129
BLAST of GR407659 vs. TrEMBL
Match: O65661_ARATH (Putative uncharacterized protein AT4g39740 OS=Arabidopsis thaliana GN=AT4g39740 PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 5.584e-10 Identity = 42/106 (39.62%), Postives = 50/106 (47.17%), Query Frame = 2 Query: 218 PSNTTQFVSYTKSTKHEETRHDLHPVF---SAQSESSRSWGAYXXXXXXXXXXXXXXXXHYNDERRAVPKGHQGDSR-----SRNIVSGPIIGGPFTLVNTEKQTV 511 PS Q V+Y KST+ D+ P+F SRS Y HYNDERRAVP+G + S V GPIIGGPFTLV+TE + V Sbjct: 191 PSKRIQSVNYCKSTRQGHEIPDVKPLFPTGGGTQAPSRSRARYAVPAILLGFAGFVGFLHYNDERRAVPRGQASSNSGCGCGSNTTVKGPIIGGPFTLVSTENKIV 296
BLAST of GR407659 vs. TrEMBL
Match: B9H537_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_715909 PE=4 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 1.244e-9 Identity = 47/127 (37.01%), Postives = 60/127 (47.24%), Query Frame = 2 Query: 131 MPLSRFLLFSSKHRSTREXXXXXXXPRRVPSNTTQFVSYTKSTKHEETRHDLHPVFSAQSESSRSWGAYXXXXXXXXXXXXXXXXHYNDERRAVPKGHQGDSRSRNIVSGPIIGGPFTLVNTEKQTV 511 MP+SR+L FS+K R + R PS Q ++KST + + P + ++ R HYNDERRAVPKG D + V GPIIGGPFTLVNTE + V Sbjct: 1 MPISRYLFFSTKQRPGQ---CLNLLRRLGPSKRVQSSCFSKSTNQNHWKRPV-PQVKVELKAPRF---LVIPAAVLGFVGLAAFVHYNDERRAVPKGQGSDCVN---VKGPIIGGPFTLVNTENKVV 117
BLAST of GR407659 vs. TrEMBL
Match: B9HFH6_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_217548 PE=4 SV=1) HSP 1 Score: 62.7734 bits (151), Expect = 1.375e-8 Identity = 40/98 (40.82%), Postives = 48/98 (48.98%), Query Frame = 2 Query: 218 PSNTTQFVSYTKSTKHEETRHDLHPVFSAQSESSRSWGAYXXXXXXXXXXXXXXXXHYNDERRAVPKGHQGDSRSRNIVSGPIIGGPFTLVNTEKQTV 511 PS Q + +KST+ + D+ V Q E R +Y HYNDERRAVPKG D R V GP IGGPFTL+NTE + V Sbjct: 4 PSKRVQSSNLSKSTRQNNGKLDVRLVEQVQVEP-RVPRSYAIPAAILGFAGLAAFVHYNDERRAVPKGQGSD---RGNVKGPTIGGPFTLINTEDKVV 97
BLAST of GR407659 vs. TAIR peptide
Match: AT4G39740.1 (| Symbols: | Thioredoxin superfamily protein | chr4:18435586-18437095 REVERSE LENGTH=276) HSP 1 Score: 67.3958 bits (163), Expect = 4.932e-12 Identity = 42/106 (39.62%), Postives = 50/106 (47.17%), Query Frame = 2 Query: 218 PSNTTQFVSYTKSTKHEETRHDLHPVF---SAQSESSRSWGAYXXXXXXXXXXXXXXXXHYNDERRAVPKGHQGDSR-----SRNIVSGPIIGGPFTLVNTEKQTV 511 PS Q V+Y KST+ D+ P+F SRS Y HYNDERRAVP+G + S V GPIIGGPFTLV+TE + V Sbjct: 24 PSKRIQSVNYCKSTRQGHEIPDVKPLFPTGGGTQAPSRSRARYAVPAILLGFAGFVGFLHYNDERRAVPRGQASSNSGCGCGSNTTVKGPIIGGPFTLVSTENKIV 129 The following BLAST results are available for this feature:
BLAST of GR407659 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl) Total hits: 7
BLAST of GR407659 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide) Total hits: 1
InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GR407659 ID=GR407659; Name=GR407659; organism=Cicer arietinum; type=EST; length=512bpback to top |