GR407659

EST Overview
NameGR407659
Unique NameGR407659
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length512
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Homology
BLAST of GR407659 vs. TrEMBL
Match: D7UE30_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_304.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00005874001 PE=4 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.570e-12
Identity = 49/128 (38.28%), Postives = 66/128 (51.56%), Query Frame = 2
Query:  131 MPLSRFLLFSSKHRSTREXXXXXXXPRRVPSNTTQFVSYTKSTKHEETRHDLHPVFSAQSESSRSWGAYXXXXXXXXXXXXXXXX-HYNDERRAVPKGHQGDSRSRNIVSGPIIGGPFTLVNTEKQTV 511
            M LSRF+L +SK  S           RR  S      SY++S+ +   R D+H     +++ S+SW A+                 HYNDERR V KG QG++  RN V GPIIGGPFTL++ + Q V
Sbjct:    1 MSLSRFVLSASKKCSIEALNPLRRFGRRFQSR-----SYSRSSWYGNGRPDIHTPVPVKTQGSQSWSAFIIPAAGLLGIAGGALFIHYNDERRVVLKG-QGNNSERNAVLGPIIGGPFTLIDAKHQLV 122          
BLAST of GR407659 vs. TrEMBL
Match: D7M949_ARALY (Electron transport SCO1/SenC family protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_490756 PE=4 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 3.273e-10
Identity = 42/109 (38.53%), Postives = 53/109 (48.62%), Query Frame = 2
Query:  209 RRVPSNTTQFVSYTKSTKHEETRHDLHPVF---SAQSESSRSWGAYXXXXXXXXXXXXXXXXHYNDERRAVPKGHQGDSR-----SRNIVSGPIIGGPFTLVNTEKQTV 511
            R  PS   Q  +Y+KST+      D++P+F        SSRS   Y                HYNDERRAVP+G    +      S   V GPIIGGPFTL++TE + V
Sbjct:   21 RSGPSKRIQSFNYSKSTRQGHEIPDVNPLFPMGGGTQASSRSRARYAVPAIVLGFAGFITFLHYNDERRAVPRGQASSNSGCGCGSNTTVKGPIIGGPFTLMSTENKIV 129          
BLAST of GR407659 vs. TrEMBL
Match: Q8LAL0_ARATH (At4g39740 OS=Arabidopsis thaliana GN=At4g39740 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 5.584e-10
Identity = 42/106 (39.62%), Postives = 50/106 (47.17%), Query Frame = 2
Query:  218 PSNTTQFVSYTKSTKHEETRHDLHPVF---SAQSESSRSWGAYXXXXXXXXXXXXXXXXHYNDERRAVPKGHQGDSR-----SRNIVSGPIIGGPFTLVNTEKQTV 511
            PS   Q V+Y KST+      D+ P+F         SRS   Y                HYNDERRAVP+G    +      S   V GPIIGGPFTLV+TE + V
Sbjct:   24 PSKRIQSVNYCKSTRQGHEIPDVKPLFPTGGGTQAPSRSRARYAVPAILLGFAGFVGFLHYNDERRAVPRGQASSNSGCGCGSNTTVKGPIIGGPFTLVSTENKIV 129          
BLAST of GR407659 vs. TrEMBL
Match: Q8GYI8_ARATH (Putative uncharacterized protein At4g39740/T19P19_130 OS=Arabidopsis thaliana GN=At4g39740/T19P19_130 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 5.584e-10
Identity = 42/106 (39.62%), Postives = 50/106 (47.17%), Query Frame = 2
Query:  218 PSNTTQFVSYTKSTKHEETRHDLHPVF---SAQSESSRSWGAYXXXXXXXXXXXXXXXXHYNDERRAVPKGHQGDSR-----SRNIVSGPIIGGPFTLVNTEKQTV 511
            PS   Q V+Y KST+      D+ P+F         SRS   Y                HYNDERRAVP+G    +      S   V GPIIGGPFTLV+TE + V
Sbjct:   24 PSKRIQSVNYCKSTRQGHEIPDVKPLFPTGGGTQAPSRSRARYAVPAILLGFAGFVGFLHYNDERRAVPRGQASSNSGCGCGSNTTVKGPIIGGPFTLVSTENKIV 129          
BLAST of GR407659 vs. TrEMBL
Match: O65661_ARATH (Putative uncharacterized protein AT4g39740 OS=Arabidopsis thaliana GN=AT4g39740 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 5.584e-10
Identity = 42/106 (39.62%), Postives = 50/106 (47.17%), Query Frame = 2
Query:  218 PSNTTQFVSYTKSTKHEETRHDLHPVF---SAQSESSRSWGAYXXXXXXXXXXXXXXXXHYNDERRAVPKGHQGDSR-----SRNIVSGPIIGGPFTLVNTEKQTV 511
            PS   Q V+Y KST+      D+ P+F         SRS   Y                HYNDERRAVP+G    +      S   V GPIIGGPFTLV+TE + V
Sbjct:  191 PSKRIQSVNYCKSTRQGHEIPDVKPLFPTGGGTQAPSRSRARYAVPAILLGFAGFVGFLHYNDERRAVPRGQASSNSGCGCGSNTTVKGPIIGGPFTLVSTENKIV 296          
BLAST of GR407659 vs. TrEMBL
Match: B9H537_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_715909 PE=4 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 1.244e-9
Identity = 47/127 (37.01%), Postives = 60/127 (47.24%), Query Frame = 2
Query:  131 MPLSRFLLFSSKHRSTREXXXXXXXPRRVPSNTTQFVSYTKSTKHEETRHDLHPVFSAQSESSRSWGAYXXXXXXXXXXXXXXXXHYNDERRAVPKGHQGDSRSRNIVSGPIIGGPFTLVNTEKQTV 511
            MP+SR+L FS+K R  +         R  PS   Q   ++KST     +  + P    + ++ R                     HYNDERRAVPKG   D  +   V GPIIGGPFTLVNTE + V
Sbjct:    1 MPISRYLFFSTKQRPGQ---CLNLLRRLGPSKRVQSSCFSKSTNQNHWKRPV-PQVKVELKAPRF---LVIPAAVLGFVGLAAFVHYNDERRAVPKGQGSDCVN---VKGPIIGGPFTLVNTENKVV 117          
BLAST of GR407659 vs. TrEMBL
Match: B9HFH6_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_217548 PE=4 SV=1)

HSP 1 Score: 62.7734 bits (151), Expect = 1.375e-8
Identity = 40/98 (40.82%), Postives = 48/98 (48.98%), Query Frame = 2
Query:  218 PSNTTQFVSYTKSTKHEETRHDLHPVFSAQSESSRSWGAYXXXXXXXXXXXXXXXXHYNDERRAVPKGHQGDSRSRNIVSGPIIGGPFTLVNTEKQTV 511
            PS   Q  + +KST+    + D+  V   Q E  R   +Y                HYNDERRAVPKG   D   R  V GP IGGPFTL+NTE + V
Sbjct:    4 PSKRVQSSNLSKSTRQNNGKLDVRLVEQVQVEP-RVPRSYAIPAAILGFAGLAAFVHYNDERRAVPKGQGSD---RGNVKGPTIGGPFTLINTEDKVV 97          
BLAST of GR407659 vs. TAIR peptide
Match: AT4G39740.1 (| Symbols: | Thioredoxin superfamily protein | chr4:18435586-18437095 REVERSE LENGTH=276)

HSP 1 Score: 67.3958 bits (163), Expect = 4.932e-12
Identity = 42/106 (39.62%), Postives = 50/106 (47.17%), Query Frame = 2
Query:  218 PSNTTQFVSYTKSTKHEETRHDLHPVF---SAQSESSRSWGAYXXXXXXXXXXXXXXXXHYNDERRAVPKGHQGDSR-----SRNIVSGPIIGGPFTLVNTEKQTV 511
            PS   Q V+Y KST+      D+ P+F         SRS   Y                HYNDERRAVP+G    +      S   V GPIIGGPFTLV+TE + V
Sbjct:   24 PSKRIQSVNYCKSTRQGHEIPDVKPLFPTGGGTQAPSRSRARYAVPAILLGFAGFVGFLHYNDERRAVPRGQASSNSGCGCGSNTTVKGPIIGGPFTLVSTENKIV 129          
The following BLAST results are available for this feature:
BLAST of GR407659 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 7
Match NameE-valueIdentityDescription
D7UE30_VITVI1.570e-1238.28Whole genome shotgun sequence of line PN40024, sca... [more]
D7M949_ARALY3.273e-1038.53Electron transport SCO1/SenC family protein OS=Ara... [more]
Q8LAL0_ARATH5.584e-1039.62At4g39740 OS=Arabidopsis thaliana GN=At4g39740 PE=... [more]
Q8GYI8_ARATH5.584e-1039.62Putative uncharacterized protein At4g39740/T19P19_... [more]
O65661_ARATH5.584e-1039.62Putative uncharacterized protein AT4g39740 OS=Arab... [more]
B9H537_POPTR1.244e-937.01Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9HFH6_POPTR1.375e-840.82Predicted protein (Fragment) OS=Populus trichocarp... [more]
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BLAST of GR407659 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT4G39740.14.932e-1239.62| Symbols: | Thioredoxin superfamily protein | ch... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 23..29
score: NAcoord: 74..89
score
NoneNo IPR availableSEGsegsegcoord: 31..45
score
NoneNo IPR availableSEGsegsegcoord: 24..38
score

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GR407659 ID=GR407659; Name=GR407659; organism=Cicer arietinum; type=EST; length=512bp
TTTTTGCAGCTGAAATAGGCGCATGTCATGGGTTTTACCTTTTGCAATTC
AAACTCACACACCAAAATCAAAAACTCTTTCCACCATATTATTATTCTCA
CAACAACTTAGAATTTAATTACCATTAGTCATGCCTCTATCAAGATTTTT
ACTCTTTTCATCTAAACATCGTTCTACTCGCGAAGCTCTCGCTCTTCTTC
TTCTTCCAAGGCGTGTTCCTTCTAATACAACTCAATTTGTTAGCTATACA
AAATCTACAAAACATGAGGAAACAAGACATGATCTTCATCCTGTATTTTC
TGCACAATCGGAGTCTTCTCGCTCATGGGGAGCATATGCTGTTTCAGCTG
TTGTTTTAGGATTTGCTGGGTTTGCGGCTTTTTTTCATTATAACGATGAG
AGGAGAGCTGTTCCAAAAGGTCACCAGGGAGATAGCCGCAGTAGAAATAT
AGTCAGTGGACCCATAATTGGTGGTCCCTTTACACTGGTTAATACAGAGA
AACAAACAGTTA
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