GR917011

EST Overview


Name	GR917011
Unique Name	GR917011
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	415

Libraries


Library Name	Type
LIBEST_024969 Early immune responsive suppression subtracted cDNA libraries of Chickpea (Cicer arietinum cv. WR-315) wilt	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

[Close]

BLAST of GR917011 vs. SwissProt
Match: SODC_PEA (Superoxide dismutase [Cu-Zn] OS=Pisum sativum GN=SODCC PE=2 SV=2)

HSP 1 Score: 166.007 bits (419), Expect = 5.370e-41
Identity = 77/86 (89.53%), Postives = 81/86 (94.19%), Query Frame = 1

Query:  157 MVKAVAVLGSSDTVSGTINFSQEGDGPTTVTGNLAGLKPGLHGFHIHALGDTTNGCISTGPHFNPNGKEHGSPEDPIRHAGDLGNI 414
            MVKAVAVL +S+ VSGTINFSQEG+GPTTVTG LAGLKPGLHGFHIHALGDTTNGCISTGPHFNPNGKEHG+PED  RHAGDLGNI
Sbjct:    1 MVKAVAVLSNSNEVSGTINFSQEGNGPTTVTGTLAGLKPGLHGFHIHALGDTTNGCISTGPHFNPNGKEHGAPEDETRHAGDLGNI 86

[Close]

BLAST of GR917011 vs. SwissProt
Match: SODC_SPIOL (Superoxide dismutase [Cu-Zn] OS=Spinacia oleracea GN=SODCC PE=2 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 6.565e-39
Identity = 70/86 (81.40%), Postives = 80/86 (93.02%), Query Frame = 1

Query:  157 MVKAVAVLGSSDTVSGTINFSQEGDGPTTVTGNLAGLKPGLHGFHIHALGDTTNGCISTGPHFNPNGKEHGSPEDPIRHAGDLGNI 414
            M KAV VL SS+ VSGT+ F+QEGDGPTTVTGN++GLKPGLHGFH+HALGDTTNGC+STGPH+NPNGKEHG+PED +RHAGDLGNI
Sbjct:    1 MGKAVVVLSSSEGVSGTVYFAQEGDGPTTVTGNVSGLKPGLHGFHVHALGDTTNGCMSTGPHYNPNGKEHGAPEDDVRHAGDLGNI 86

[Close]

BLAST of GR917011 vs. SwissProt
Match: SODC_IPOBA (Superoxide dismutase [Cu-Zn] OS=Ipomoea batatas GN=SODCC PE=2 SV=2)

HSP 1 Score: 157.532 bits (397), Expect = 1.910e-38
Identity = 73/86 (84.88%), Postives = 79/86 (91.86%), Query Frame = 1

Query:  157 MVKAVAVLGSSDTVSGTINFSQEGDGPTTVTGNLAGLKPGLHGFHIHALGDTTNGCISTGPHFNPNGKEHGSPEDPIRHAGDLGNI 414
            MVKAVAVL SS+ VSGTI FSQEGDGPTTVTGN++GLKPGLHGFH+HALGDTTNGC+STGPHFNP GKEHG+P D  RHAGDLGNI
Sbjct:    1 MVKAVAVLSSSEGVSGTIFFSQEGDGPTTVTGNVSGLKPGLHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPGDDNRHAGDLGNI 86

[Close]

BLAST of GR917011 vs. SwissProt
Match: SODC_ANACO (Superoxide dismutase [Cu-Zn] OS=Ananas comosus GN=SOD1 PE=2 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 2.495e-38
Identity = 70/86 (81.40%), Postives = 79/86 (91.86%), Query Frame = 1

Query:  157 MVKAVAVLGSSDTVSGTINFSQEGDGPTTVTGNLAGLKPGLHGFHIHALGDTTNGCISTGPHFNPNGKEHGSPEDPIRHAGDLGNI 414
            MVKAVAVLGSS+ V GTI F+QEGDGPTTVTG+++GLKPGLHGFH+HALGDTTNGC+STGPHFNP G EHG+PED  RHAGDLGN+
Sbjct:    1 MVKAVAVLGSSEGVKGTIYFTQEGDGPTTVTGSISGLKPGLHGFHVHALGDTTNGCMSTGPHFNPAGNEHGAPEDETRHAGDLGNV 86

[Close]

BLAST of GR917011 vs. SwissProt
Match: SODC_NICPL (Superoxide dismutase [Cu-Zn] OS=Nicotiana plumbaginifolia GN=SODCC PE=2 SV=2)

HSP 1 Score: 156.762 bits (395), Expect = 3.258e-38
Identity = 70/86 (81.40%), Postives = 80/86 (93.02%), Query Frame = 1

Query:  157 MVKAVAVLGSSDTVSGTINFSQEGDGPTTVTGNLAGLKPGLHGFHIHALGDTTNGCISTGPHFNPNGKEHGSPEDPIRHAGDLGNI 414
            MVKAVAVL SS+ VSGTI F+Q+GD PTTVTGN++GLKPGLHGFH+HALGDTTNGC+STGPH+NP GKEHG+PED +RHAGDLGNI
Sbjct:    1 MVKAVAVLSSSEGVSGTIFFTQDGDAPTTVTGNVSGLKPGLHGFHVHALGDTTNGCMSTGPHYNPAGKEHGAPEDEVRHAGDLGNI 86

[Close]

BLAST of GR917011 vs. SwissProt
Match: SODC1_ORYSJ (Superoxide dismutase [Cu-Zn] 1 OS=Oryza sativa subsp. japonica GN=SODCC1 PE=1 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 3.258e-38
Identity = 70/86 (81.40%), Postives = 79/86 (91.86%), Query Frame = 1

Query:  157 MVKAVAVLGSSDTVSGTINFSQEGDGPTTVTGNLAGLKPGLHGFHIHALGDTTNGCISTGPHFNPNGKEHGSPEDPIRHAGDLGNI 414
            MVKAV VLGSS+ V GTI+F QEGDGPTTVTG+++GLKPGLHGFHIHALGDTTNGC+STGPH+NP GKEHG+PED  RHAGDLGN+
Sbjct:    1 MVKAVVVLGSSEIVKGTIHFVQEGDGPTTVTGSVSGLKPGLHGFHIHALGDTTNGCMSTGPHYNPAGKEHGAPEDETRHAGDLGNV 86

[Close]

BLAST of GR917011 vs. SwissProt
Match: SODC1_ORYSI (Superoxide dismutase [Cu-Zn] 1 OS=Oryza sativa subsp. indica GN=SODCC1 PE=2 SV=2)

HSP 1 Score: 156.762 bits (395), Expect = 3.258e-38
Identity = 70/86 (81.40%), Postives = 79/86 (91.86%), Query Frame = 1

Query:  157 MVKAVAVLGSSDTVSGTINFSQEGDGPTTVTGNLAGLKPGLHGFHIHALGDTTNGCISTGPHFNPNGKEHGSPEDPIRHAGDLGNI 414
            MVKAV VLGSS+ V GTI+F QEGDGPTTVTG+++GLKPGLHGFHIHALGDTTNGC+STGPH+NP GKEHG+PED  RHAGDLGN+
Sbjct:    1 MVKAVVVLGSSEIVKGTIHFVQEGDGPTTVTGSVSGLKPGLHGFHIHALGDTTNGCMSTGPHYNPAGKEHGAPEDETRHAGDLGNV 86

[Close]

BLAST of GR917011 vs. SwissProt
Match: SODC_PAUKA (Superoxide dismutase [Cu-Zn] OS=Paulownia kawakamii GN=SODCC PE=2 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 4.255e-38
Identity = 69/86 (80.23%), Postives = 79/86 (91.86%), Query Frame = 1

Query:  157 MVKAVAVLGSSDTVSGTINFSQEGDGPTTVTGNLAGLKPGLHGFHIHALGDTTNGCISTGPHFNPNGKEHGSPEDPIRHAGDLGNI 414
            MVK VAVL SS+ VSGTI F+QEGDGPTTVTGN++GLKPG HGFH+HALGDTTNGC+STGPHFNP GKEHG+P+D +RHAGDLGN+
Sbjct:    1 MVKGVAVLSSSEGVSGTIYFTQEGDGPTTVTGNVSGLKPGPHGFHVHALGDTTNGCLSTGPHFNPAGKEHGAPDDEVRHAGDLGNV 86

[Close]

BLAST of GR917011 vs. SwissProt
Match: SODC_CAPAN (Superoxide dismutase [Cu-Zn] OS=Capsicum annuum GN=SODCC PE=2 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 5.557e-38
Identity = 71/86 (82.56%), Postives = 79/86 (91.86%), Query Frame = 1

Query:  157 MVKAVAVLGSSDTVSGTINFSQEGDGPTTVTGNLAGLKPGLHGFHIHALGDTTNGCISTGPHFNPNGKEHGSPEDPIRHAGDLGNI 414
            MVKAVAVL SS+ VSGTI FSQ+GD PTTVTGN++GLKPGLHGFH+HALGDTTNGC+STGPH+NP GKEHG+PED  RHAGDLGNI
Sbjct:    1 MVKAVAVLSSSECVSGTILFSQDGDAPTTVTGNVSGLKPGLHGFHVHALGDTTNGCMSTGPHYNPAGKEHGAPEDENRHAGDLGNI 86

[Close]

BLAST of GR917011 vs. SwissProt
Match: SODC1_MESCR (Superoxide dismutase [Cu-Zn] 1 OS=Mesembryanthemum crystallinum GN=SODCC.1 PE=2 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 7.258e-38
Identity = 69/86 (80.23%), Postives = 78/86 (90.70%), Query Frame = 1

Query:  157 MVKAVAVLGSSDTVSGTINFSQEGDGPTTVTGNLAGLKPGLHGFHIHALGDTTNGCISTGPHFNPNGKEHGSPEDPIRHAGDLGNI 414
            MVKAV VL SS+ VSGT+ F+QEG GPTTVTGN++GL+PGLHGFH+HALGDTTNGC+STGPHFNP GKEHG+PED  RHAGDLGNI
Sbjct:    1 MVKAVVVLSSSEGVSGTVQFTQEGSGPTTVTGNVSGLRPGLHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDETRHAGDLGNI 86

[Close]

BLAST of GR917011 vs. TrEMBL
Match: Q9ZNQ4_CICAR (Superoxide dismutase [Cu-Zn] OS=Cicer arietinum GN=sod-1 PE=2 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 3.866e-45
Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 1

Query:  157 MVKAVAVLGSSDTVSGTINFSQEGDGPTTVTGNLAGLKPGLHGFHIHALGDTTNGCISTGPHFNPNGKEHGSPEDPIRHAGDLGNI 414
            MVKAVAVLGSSDTVSGTINFSQEGDGPTTVTGNLAGLKPGLHGFHIHALGDTTNGCISTGPHFNPNGKEHGSPEDPIRHAGDLGNI
Sbjct:    1 MVKAVAVLGSSDTVSGTINFSQEGDGPTTVTGNLAGLKPGLHGFHIHALGDTTNGCISTGPHFNPNGKEHGSPEDPIRHAGDLGNI 86

[Close]

BLAST of GR917011 vs. TrEMBL
Match: Q5DWE8_PEA (Superoxide dismutase [Cu-Zn] OS=Pisum sativum GN=SOD PE=2 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 1.090e-39
Identity = 77/86 (89.53%), Postives = 81/86 (94.19%), Query Frame = 1

Query:  157 MVKAVAVLGSSDTVSGTINFSQEGDGPTTVTGNLAGLKPGLHGFHIHALGDTTNGCISTGPHFNPNGKEHGSPEDPIRHAGDLGNI 414
            MVKAVAVL +S+ VSGTINFSQEG+GPTTVTG LAGLKPGLHGFHIHALGDTTNGCISTGPHFNPNGKEHG+PED  RHAGDLGNI
Sbjct:    1 MVKAVAVLSNSNEVSGTINFSQEGNGPTTVTGTLAGLKPGLHGFHIHALGDTTNGCISTGPHFNPNGKEHGAPEDETRHAGDLGNI 86

[Close]

BLAST of GR917011 vs. TrEMBL
Match: B7FGV9_MEDTR (Superoxide dismutase [Cu-Zn] OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 1.858e-39
Identity = 74/86 (86.05%), Postives = 83/86 (96.51%), Query Frame = 1

Query:  157 MVKAVAVLGSSDTVSGTINFSQEGDGPTTVTGNLAGLKPGLHGFHIHALGDTTNGCISTGPHFNPNGKEHGSPEDPIRHAGDLGNI 414
            MVKAVAVLG+S+ VSGTI+F+QEG+GPTTVTGNL+GLKPGLHGFHIHALGDTTNGC+STGPHFNPNGKEHG+PED  RHAGDLGN+
Sbjct:    1 MVKAVAVLGNSNDVSGTISFTQEGNGPTTVTGNLSGLKPGLHGFHIHALGDTTNGCLSTGPHFNPNGKEHGAPEDETRHAGDLGNV 86

[Close]

BLAST of GR917011 vs. TrEMBL
Match: Q45W82_ARAHY (Superoxide dismutase [Cu-Zn] OS=Arachis hypogaea PE=2 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 1.205e-38
Identity = 74/86 (86.05%), Postives = 80/86 (93.02%), Query Frame = 1

Query:  157 MVKAVAVLGSSDTVSGTINFSQEGDGPTTVTGNLAGLKPGLHGFHIHALGDTTNGCISTGPHFNPNGKEHGSPEDPIRHAGDLGNI 414
            MVKAVAVL SS+ VSGTI FSQEG+GPTTVTGNLAGLKPGLHGFH+HALGDTTNGC+STGPHFNPN KEHG+PED  RHAGDLGN+
Sbjct:    1 MVKAVAVLSSSEGVSGTIQFSQEGNGPTTVTGNLAGLKPGLHGFHVHALGDTTNGCLSTGPHFNPNNKEHGAPEDENRHAGDLGNV 86

[Close]

BLAST of GR917011 vs. TrEMBL
Match: Q1HDS7_ARAHY (Superoxide dismutase [Cu-Zn] OS=Arachis hypogaea PE=2 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 1.205e-38
Identity = 74/86 (86.05%), Postives = 80/86 (93.02%), Query Frame = 1

Query:  157 MVKAVAVLGSSDTVSGTINFSQEGDGPTTVTGNLAGLKPGLHGFHIHALGDTTNGCISTGPHFNPNGKEHGSPEDPIRHAGDLGNI 414
            MVKAVAVL SS+ VSGTI FSQEG+GPTTVTGNLAGLKPGLHGFH+HALGDTTNGC+STGPHFNPN KEHG+PED  RHAGDLGN+
Sbjct:    1 MVKAVAVLSSSEGVSGTIQFSQEGNGPTTVTGNLAGLKPGLHGFHVHALGDTTNGCLSTGPHFNPNNKEHGAPEDENRHAGDLGNV 86

[Close]

BLAST of GR917011 vs. TrEMBL
Match: A5HIG4_9FABA (Superoxide dismutase [Cu-Zn] OS=Caragana jubata PE=2 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 1.205e-38
Identity = 73/86 (84.88%), Postives = 82/86 (95.35%), Query Frame = 1

Query:  157 MVKAVAVLGSSDTVSGTINFSQEGDGPTTVTGNLAGLKPGLHGFHIHALGDTTNGCISTGPHFNPNGKEHGSPEDPIRHAGDLGNI 414
            MVKAVAVLGS++ V+GTI+FSQEG+GPTTVTGNLAGLKPGLHGFH+HALGDTTNGC+STGPHFNP GKEHG+PED  RHAGDLGN+
Sbjct:    1 MVKAVAVLGSNEGVTGTISFSQEGNGPTTVTGNLAGLKPGLHGFHVHALGDTTNGCLSTGPHFNPQGKEHGAPEDVNRHAGDLGNV 86

[Close]

BLAST of GR917011 vs. TrEMBL
Match: Q70CE4_FAGSY (Superoxide dismutase (Fragment) OS=Fagus sylvatica GN=sod1 PE=2 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 2.055e-38
Identity = 72/93 (77.42%), Postives = 82/93 (88.17%), Query Frame = 1

Query:  136 LFRSHSTMVKAVAVLGSSDTVSGTINFSQEGDGPTTVTGNLAGLKPGLHGFHIHALGDTTNGCISTGPHFNPNGKEHGSPEDPIRHAGDLGNI 414
            + RSH TM K VAVL S++ V GTI F+QEGDGPTTVTGN++GLKPGLHGFH+HALGDTTNGC+STGPHFNP GKEHG+PED  RHAGDLGN+
Sbjct:    8 VLRSHRTMAKGVAVLSSNEGVCGTIYFAQEGDGPTTVTGNISGLKPGLHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDANRHAGDLGNV 100

[Close]

BLAST of GR917011 vs. TrEMBL
Match: Q56VR6_LOTJA (Superoxide dismutase [Cu-Zn] OS=Lotus japonicus GN=sodCc PE=3 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 2.055e-38
Identity = 72/86 (83.72%), Postives = 79/86 (91.86%), Query Frame = 1

Query:  157 MVKAVAVLGSSDTVSGTINFSQEGDGPTTVTGNLAGLKPGLHGFHIHALGDTTNGCISTGPHFNPNGKEHGSPEDPIRHAGDLGNI 414
            MVKAVAVLGSSD V GTI FSQEGDGPT V+G ++GLKPGLHGFH+HALGDTTNGC+STGPHFNP GKEHG+PED IRHAGDLGN+
Sbjct:    1 MVKAVAVLGSSDNVKGTITFSQEGDGPTNVSGTISGLKPGLHGFHVHALGDTTNGCLSTGPHFNPAGKEHGAPEDAIRHAGDLGNV 86

[Close]

BLAST of GR917011 vs. TrEMBL
Match: Q3SAX1_GOSHI (Superoxide dismutase [Cu-Zn] OS=Gossypium hirsutum PE=2 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 2.055e-38
Identity = 73/86 (84.88%), Postives = 81/86 (94.19%), Query Frame = 1

Query:  157 MVKAVAVLGSSDTVSGTINFSQEGDGPTTVTGNLAGLKPGLHGFHIHALGDTTNGCISTGPHFNPNGKEHGSPEDPIRHAGDLGNI 414
            MVKAVAVLGS++ VSGT+ FSQEGDGPTTVTGNL+GLKPGLHGFH+HALGDTTNGC+STGPHFNP GKEHG+PED  RHAGDLGN+
Sbjct:    1 MVKAVAVLGSNEGVSGTVFFSQEGDGPTTVTGNLSGLKPGLHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDENRHAGDLGNV 86

[Close]

BLAST of GR917011 vs. TrEMBL
Match: B1PE19_CUCSA (Superoxide dismutase [Cu-Zn] OS=Cucumis sativus GN=SOD PE=2 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 5.979e-38
Identity = 73/86 (84.88%), Postives = 81/86 (94.19%), Query Frame = 1

Query:  157 MVKAVAVLGSSDTVSGTINFSQEGDGPTTVTGNLAGLKPGLHGFHIHALGDTTNGCISTGPHFNPNGKEHGSPEDPIRHAGDLGNI 414
            MVKAVAVLGSS+ VSGTI F+QEGDGPTTVTGN++GLKPGLHGFH+HALGDTTNGC+STGPHFNP GK+HG+PED  RHAGDLGNI
Sbjct:    1 MVKAVAVLGSSEGVSGTIFFTQEGDGPTTVTGNVSGLKPGLHGFHVHALGDTTNGCMSTGPHFNPAGKQHGAPEDENRHAGDLGNI 86

[Close]

BLAST of GR917011 vs. TAIR peptide
Match: AT1G08830.2 (| Symbols: CSD1 | copper/zinc superoxide dismutase 1 | chr1:2827700-2829053 FORWARD LENGTH=152)

HSP 1 Score: 146.362 bits (368), Expect = 5.257e-36
Identity = 66/86 (76.74%), Postives = 76/86 (88.37%), Query Frame = 1

Query:  157 MVKAVAVLGSSDTVSGTINFSQEGDGPTTVTGNLAGLKPGLHGFHIHALGDTTNGCISTGPHFNPNGKEHGSPEDPIRHAGDLGNI 414
            M K VAVL SS+ V+GTI F+QEGDG TTV+G ++GLKPGLHGFH+HALGDTTNGC+STGPHFNP+GK HG+PED  RHAGDLGNI
Sbjct:    1 MAKGVAVLNSSEGVTGTIFFTQEGDGVTTVSGTVSGLKPGLHGFHVHALGDTTNGCMSTGPHFNPDGKTHGAPEDANRHAGDLGNI 86

[Close]

BLAST of GR917011 vs. TAIR peptide
Match: AT1G08830.1 (| Symbols: CSD1 | copper/zinc superoxide dismutase 1 | chr1:2827700-2829053 FORWARD LENGTH=152)

HSP 1 Score: 146.362 bits (368), Expect = 5.257e-36
Identity = 66/86 (76.74%), Postives = 76/86 (88.37%), Query Frame = 1

Query:  157 MVKAVAVLGSSDTVSGTINFSQEGDGPTTVTGNLAGLKPGLHGFHIHALGDTTNGCISTGPHFNPNGKEHGSPEDPIRHAGDLGNI 414
            M K VAVL SS+ V+GTI F+QEGDG TTV+G ++GLKPGLHGFH+HALGDTTNGC+STGPHFNP+GK HG+PED  RHAGDLGNI
Sbjct:    1 MAKGVAVLNSSEGVTGTIFFTQEGDGVTTVSGTVSGLKPGLHGFHVHALGDTTNGCMSTGPHFNPDGKTHGAPEDANRHAGDLGNI 86

[Close]

BLAST of GR917011 vs. TAIR peptide
Match: AT2G28190.1 (| Symbols: CSD2, CZSOD2 | copper/zinc superoxide dismutase 2 | chr2:12014548-12016303 FORWARD LENGTH=216)

HSP 1 Score: 122.479 bits (306), Expect = 8.129e-29
Identity = 55/88 (62.50%), Postives = 62/88 (70.45%), Query Frame = 1

Query:  151 STMVKAVAVLGSSDTVSGTINFSQEGDGPTTVTGNLAGLKPGLHGFHIHALGDTTNGCISTGPHFNPNGKEHGSPEDPIRHAGDLGNI 414
            S   KAVAVL  +  V G +  +Q+  GPTTV   + GL PG HGFH+H  GDTTNGCISTGPHFNPN   HG+PED  RHAGDLGNI
Sbjct:   62 SAAKKAVAVLKGTSDVEGVVTLTQDDSGPTTVNVRITGLTPGPHGFHLHEFGDTTNGCISTGPHFNPNNMTHGAPEDECRHAGDLGNI 149

[Close]

BLAST of GR917011 vs. TAIR peptide
Match: AT5G18100.2 (| Symbols: CSD3 | copper/zinc superoxide dismutase 3 | chr5:5987221-5988436 FORWARD LENGTH=137)

HSP 1 Score: 114.775 bits (286), Expect = 1.695e-26
Identity = 50/85 (58.82%), Postives = 62/85 (72.94%), Query Frame = 1

Query:  160 VKAVAVLGSSDTVSGTINFSQEGDGPTTVTGNLAGLKPGLHGFHIHALGDTTNGCISTGPHFNPNGKEHGSPEDPIRHAGDLGNI 414
            ++AVA++   + V G + F Q+  G T VTG ++GL PG HGFHIH+ GDTTNGCISTGPHFNP  + HG P +  RHAGDLGNI
Sbjct:    8 LRAVALIAGDNNVRGCLQFVQDISGTTHVTGKISGLSPGFHGFHIHSFGDTTNGCISTGPHFNPLNRVHGPPNEEERHAGDLGNI 92

[Close]

BLAST of GR917011 vs. TAIR peptide
Match: AT5G18100.1 (| Symbols: CSD3 | copper/zinc superoxide dismutase 3 | chr5:5987221-5988706 FORWARD LENGTH=164)

HSP 1 Score: 114.775 bits (286), Expect = 1.695e-26
Identity = 50/85 (58.82%), Postives = 62/85 (72.94%), Query Frame = 1

Query:  160 VKAVAVLGSSDTVSGTINFSQEGDGPTTVTGNLAGLKPGLHGFHIHALGDTTNGCISTGPHFNPNGKEHGSPEDPIRHAGDLGNI 414
            ++AVA++   + V G + F Q+  G T VTG ++GL PG HGFHIH+ GDTTNGCISTGPHFNP  + HG P +  RHAGDLGNI
Sbjct:    8 LRAVALIAGDNNVRGCLQFVQDISGTTHVTGKISGLSPGFHGFHIHSFGDTTNGCISTGPHFNPLNRVHGPPNEEERHAGDLGNI 92

The following BLAST results are available for this feature:

BLAST of GR917011 vs. SwissProt
BLAST of GR917011 vs. TrEMBL
BLAST of GR917011 vs. TAIR peptide

BLAST of GR917011 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
SODC_PEA	5.370e-41	89.53	Superoxide dismutase [Cu-Zn] OS=Pisum sativum GN=S...	[more]
SODC_SPIOL	6.565e-39	81.40	Superoxide dismutase [Cu-Zn] OS=Spinacia oleracea ...	[more]
SODC_IPOBA	1.910e-38	84.88	Superoxide dismutase [Cu-Zn] OS=Ipomoea batatas GN...	[more]
SODC_ANACO	2.495e-38	81.40	Superoxide dismutase [Cu-Zn] OS=Ananas comosus GN=...	[more]
SODC_NICPL	3.258e-38	81.40	Superoxide dismutase [Cu-Zn] OS=Nicotiana plumbagi...	[more]
SODC1_ORYSJ	3.258e-38	81.40	Superoxide dismutase [Cu-Zn] 1 OS=Oryza sativa sub...	[more]
SODC1_ORYSI	3.258e-38	81.40	Superoxide dismutase [Cu-Zn] 1 OS=Oryza sativa sub...	[more]
SODC_PAUKA	4.255e-38	80.23	Superoxide dismutase [Cu-Zn] OS=Paulownia kawakami...	[more]
SODC_CAPAN	5.557e-38	82.56	Superoxide dismutase [Cu-Zn] OS=Capsicum annuum GN...	[more]
SODC1_MESCR	7.258e-38	80.23	Superoxide dismutase [Cu-Zn] 1 OS=Mesembryanthemum...	[more]

BLAST of GR917011 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
Q9ZNQ4_CICAR	3.866e-45	100.00	Superoxide dismutase [Cu-Zn] OS=Cicer arietinum GN...	[more]
Q5DWE8_PEA	1.090e-39	89.53	Superoxide dismutase [Cu-Zn] OS=Pisum sativum GN=S...	[more]
B7FGV9_MEDTR	1.858e-39	86.05	Superoxide dismutase [Cu-Zn] OS=Medicago truncatul...	[more]
Q45W82_ARAHY	1.205e-38	86.05	Superoxide dismutase [Cu-Zn] OS=Arachis hypogaea P...	[more]
Q1HDS7_ARAHY	1.205e-38	86.05	Superoxide dismutase [Cu-Zn] OS=Arachis hypogaea P...	[more]
A5HIG4_9FABA	1.205e-38	84.88	Superoxide dismutase [Cu-Zn] OS=Caragana jubata PE...	[more]
Q70CE4_FAGSY	2.055e-38	77.42	Superoxide dismutase (Fragment) OS=Fagus sylvatica...	[more]
Q56VR6_LOTJA	2.055e-38	83.72	Superoxide dismutase [Cu-Zn] OS=Lotus japonicus GN...	[more]
Q3SAX1_GOSHI	2.055e-38	84.88	Superoxide dismutase [Cu-Zn] OS=Gossypium hirsutum...	[more]
B1PE19_CUCSA	5.979e-38	84.88	Superoxide dismutase [Cu-Zn] OS=Cucumis sativus GN...	[more]

BLAST of GR917011 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 5


Match Name	E-value	Identity	Description
AT1G08830.2	5.257e-36	76.74	\| Symbols: CSD1 \| copper/zinc superoxide dismutase...	[more]
AT1G08830.1	5.257e-36	76.74	\| Symbols: CSD1 \| copper/zinc superoxide dismutase...	[more]
AT2G28190.1	8.129e-29	62.50	\| Symbols: CSD2, CZSOD2 \| copper/zinc superoxide d...	[more]
AT5G18100.2	1.695e-26	58.82	\| Symbols: CSD3 \| copper/zinc superoxide dismutase...	[more]
AT5G18100.1	1.695e-26	58.82	\| Symbols: CSD3 \| copper/zinc superoxide dismutase...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001424	Superoxide dismutase, copper/zinc binding	PRINTS	PR00068	CUZNDISMTASE	coord: 53..75 score: 1.1e-15coord: 89..96 score: 1.1
IPR001424	Superoxide dismutase, copper/zinc binding	GENE3D	2.60.40.200	no description	coord: 9..96 score: 7.5
IPR001424	Superoxide dismutase, copper/zinc binding	PANTHER	PTHR10003	CU/ZN SUPEROXIDE DISMUTASE	coord: 41..96 score: 8.7
IPR001424	Superoxide dismutase, copper/zinc binding	PFAM	PF00080	Sod_Cu	coord: 15..96 score: 1.2
IPR001424	Superoxide dismutase, copper/zinc binding	SUPERFAMILY	49329	Cu,Zn superoxide dismutase-like	coord: 9..96 score: 6.1
IPR018152	Superoxide dismutase, copper/zinc, binding site	PROSITE	PS00087	SOD_CU_ZN_1	coord: 53..63 score

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>GR917011 ID=GR917011; Name=GR917011; organism=Cicer arietinum; type=EST; length=415bp
GATTAGCGTGGTCGCGGCCGAGGTCCAATTTGTCTCCAATGGACTACTTT
ATACTGTCTACTTTTTATCCTAACAAATGGCAGTTGTCGCACACATTTTA
TTCATACCCTATTTGTTTTGTTCTAAATAGCTTTTTTGTTCAGATCACAT
TCAACAATGGTTAAGGCTGTGGCAGTTCTTGGTAGCAGTGACACTGTGTC
TGGGACTATTAACTTCAGTCAGGAGGGAGACGGTCCAACCACTGTAACTG
GAAATCTTGCTGGTCTTAAGCCTGGTCTCCATGGCTTCCATATTCATGCC
TTAGGGGACACCACAAATGGCTGCATATCAACCGGACCACATTTCAATCC
TAATGGGAAAGAACATGGTTCCCCTGAGGACCCGATTCGACATGCTGGCG
ATTTAGGAAATATCA

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **Biological Process**
Term	Definition
GO:0006801	superoxide metabolic process
GO:0055114	obsolete oxidation-reduction process

Vocabulary: **Molecular Function**
Term	Definition
GO:0046872	metal ion binding

Vocabulary: **INTERPRO**
Term	Definition
IPR001424	SOD_Cu_Zn_dom
IPR018152	SOD_Cu/Zn_BS

Search form