HO063543

EST Overview
NameHO063543
Unique NameHO063543
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length558
Libraries
Library NameType
LIBEST_026410 Chickpea drought stressed cDNA SSH library AR1cdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Homology
BLAST of HO063543 vs. TrEMBL
Match: A5BAM2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_025194 PE=4 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.922e-11
Identity = 49/152 (32.24%), Postives = 76/152 (50.00%), Query Frame = 2
Query:   41 YCFYDYVQQQPNTMDDQNKGVSHTPISTTYPPLLSHFAKNITSFKSHNQDSDFPQVTNVNDRNTPSGAINGLRKTDTAHVEVEGVGGYELSLSLTLQNPSPQTSNASNSASGISETISCCPNPDGFSSYKDCYRTSTVKERVNLDLSLAICG 496
            Y F DY+ ++    +           S  +P  L H   N+  F    ++SDF ++  + D+   +  +N     +    + E  GG  LSLSL+L +PS Q SNAS S S ISE  S  P     S++KD + + + +  +NLDLS+A+CG
Sbjct:  158 YSFDDYLAEKRGIKEGGGFRWQTQAPSPAFP--LPHDLYNLNPFGYAAEESDFLKIAKLEDQKHAAAQMNKNEDNERRPADGEEAGGCGLSLSLSLHHPSTQRSNAS-STSEISEAFSSYPR----SNFKDSFGSYSEERSINLDLSIALCG 302          
BLAST of HO063543 vs. TrEMBL
Match: B9S7B5_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0775800 PE=4 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 4.984e-11
Identity = 49/125 (39.20%), Postives = 67/125 (53.60%), Query Frame = 2
Query:  131 PPLLSHFAKNITSFKSHNQDSDFPQVTNVNDRNTPSGAINGLR---KTDTAHVEVEGVGGYELSLSLTLQNPSPQTSNASNSASGISETISCCPNPDGFSSYKDCYRTSTVKERVNLDLSLAICG 496
            P  L H   N+ SFK   ++SDF ++  V   +    A    +    T +   E E   G EL LSL+L +PS Q SNAS SAS ISE  S        +++KDC  +S+ K  +NLDLS+A+CG
Sbjct:  178 PFSLPHDLCNLNSFKYAVEESDFLKIPKVKYESCKPAAARMSKLEEATGSGRAEDEEANGCELLLSLSLPHPSSQRSNAS-SASEISEAFSSYAR----TTFKDCSGSSSAKRNINLDLSIALCG 297          
BLAST of HO063543 vs. TrEMBL
Match: D7SMG8_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_137.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00000606001 PE=4 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 6.510e-11
Identity = 49/152 (32.24%), Postives = 75/152 (49.34%), Query Frame = 2
Query:   41 YCFYDYVQQQPNTMDDQNKGVSHTPISTTYPPLLSHFAKNITSFKSHNQDSDFPQVTNVNDRNTPSGAINGLRKTDTAHVEVEGVGGYELSLSLTLQNPSPQTSNASNSASGISETISCCPNPDGFSSYKDCYRTSTVKERVNLDLSLAICG 496
            Y F DY+ ++    +           S  +P  L H   N+  F    ++SDF ++  + D+      +N     +    + E  GG  LSLSL+L +PS Q SNAS S S ISE  S  P     S++KD + + + +  +NLDLS+A+CG
Sbjct:  158 YSFDDYLAEKRGIKEGGGFRWQTQAPSPAFP--LPHDLYNLNPFGYAAEESDFLKIAKLEDQKHAVAQMNKNEDNERRPADGEEAGGCGLSLSLSLHHPSTQRSNAS-STSEISEAFSSYPR----SNFKDSFGSYSEERSINLDLSIALCG 302          
The following BLAST results are available for this feature:
BLAST of HO063543 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 3
Match NameE-valueIdentityDescription
A5BAM2_VITVI2.922e-1132.24Putative uncharacterized protein OS=Vitis vinifera... [more]
B9S7B5_RICCO4.984e-1139.20Putative uncharacterized protein OS=Ricinus commun... [more]
D7SMG8_VITVI6.510e-1132.24Whole genome shotgun sequence of line PN40024, sca... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 1..13
score

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>HO063543 ID=HO063543; Name=HO063543; organism=Cicer arietinum; type=EST; length=558bp
CGGCCGCGGGAATTCGATTTCGAGCGGCCGCCCGGGCAGGTACTGTTTTT
ATGATTATGTACAACAACAGCCCAATACCATGGATGATCAAAACAAAGGA
GTTTCTCATACCCCCATTTCCACAACATACCCCCCTCTCCTATCACATTT
TGCCAAAAACATCACTTCTTTCAAATCTCATAACCAAGATTCTGATTTCC
CTCAGGTTACTAATGTGAATGACAGAAATACCCCGTCAGGGGCAATTAAT
GGACTTAGGAAAACTGACACAGCACATGTAGAAGTTGAAGGTGTAGGAGG
GTATGAGTTGTCATTGTCACTCACATTGCAAAATCCTTCACCTCAGACAA
GTAATGCTTCTAACTCGGCAAGTGGAATCAGTGAGACAATCTCATGCTGT
CCTAACCCTGATGGGTTTAGCAGCTACAAAGACTGTTATAGAACATCTAC
TGTCAAAGAAAGGGTTAATTTAGACCTATCCTTAGCTATATGTGGCAATT
GATTTGATGCTATAGTTCACTGTAACATCTTTTACTTTAGGCATAATTCA
CTGTAGCT
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