HO067576

EST Overview


Name	HO067576
Unique Name	HO067576
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	532

Libraries


Library Name	Type
LIBEST_026414 Chickpea drought stressed cDNA SSH library BULK1	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

[Close]

BLAST of HO067576 vs. SwissProt
Match: POL4_DROME (Retrovirus-related Pol polyprotein from transposon 412 OS=Drosophila melanogaster GN=POL PE=4 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 4.693e-14
Identity = 49/169 (28.99%), Postives = 75/169 (44.38%), Query Frame = 3

Query:   21 NVNEAKEILQDIHDGSYGIHMNGHAMSRKILRAGYYWLTLEKDCYNYVKKCYKCQIYADNIHAPPIPLNTLSAPWPFSMWGIDVIGMIEPKASNGHRFILVAIDYFTKWVEAVSYANVTKNVVVKFIKRELICRYGLPSKIITNNATNLNNKMMDELCATFKIQHHNSS 527
            N  E + IL  +HD        G   +   ++  YYW  + K    YV+KC KCQ      H       T +    F    +D IG + PK+ NG+ + +  I   TK++ A+  AN +   V K I    I +YG     IT+  T   N ++ +LC   KI++  S+
Sbjct:  889 NEKEKEAILSTLHDDPIQGGHTGITKTLAKVKRHYYWKNMSKYIKEYVRKCQKCQKAKTTKHTKTPMTITETPEHAFDRVVVDTIGPL-PKSENGNEYAVTLICDLTKYLVAIPIANKSAKTVAKAIFESFILKYGPMKTFITDMGTEYKNSIITDLCKYLKIKNITST 1056

[Close]

BLAST of HO067576 vs. SwissProt
Match: GIN1_RAT (Gypsy retrotransposon integrase-like protein 1 OS=Rattus norvegicus GN=GIN1 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 3.363e-12
Identity = 47/165 (28.48%), Postives = 82/165 (49.70%), Query Frame = 3

Query:   18 VNVNEAKEILQDIHDGSYGIHMNGHAMSRKI--LRAGYYWLTLEKDCYNYVKKCYKCQIYADN-IHAPPIPLNTLSAPWPFSMWGIDVIGMIEPKASNGHRFILVAIDYFTKWVEAVSYANVTKNVVVKFIKRELICRYGLPSKIITNNATNLNNKMMDELCATF 503
            V+  E K++L++ H+   G+H   H +SR +  + + YYW ++  D   +V  C  CQ+     I AP   L+ +  PW  S+  +D++G     +S  H + ++  D FTKWV  +   +V+ + + K I   +   YG P KII +      +++  EL   F
Sbjct:   65 VSEEEKKKVLRECHENGPGVH---HGISRTLTLVESSYYWTSVTNDVKQWVYACQHCQVAKSTVIVAPQQHLSVVGNPW--SVVTVDLMGPFH-TSSRSHVYAMIMTDLFTKWVMILPLCDVSASEISKAI-INIFFLYGPPQKIIMDQRDEFIDQINVELYRLF 222

[Close]

BLAST of HO067576 vs. SwissProt
Match: GIN1_BOVIN (Gypsy retrotransposon integrase-like protein 1 OS=Bos taurus GN=GIN1 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 3.363e-12
Identity = 48/170 (28.24%), Postives = 83/170 (48.82%), Query Frame = 3

Query:   30 EAKEILQDIHDGSYGIHMNGHAMSRKI--LRAGYYWLTLEKDCYNYVKKCYKCQIYADN-IHAPPIPLNTLSAPWPFSMWGIDVIGMIEPKASNGHRFILVAIDYFTKWVEAVSYANVTKNVVVKFIKRELICRYGLPSKIITNNATNLNNKMMDELCATFKIQHHNSSH 530
            E K++L++ H+   G H   H +SR +  + + YYW ++  D   +V  C  CQ+  +  I AP   L  +  PW  S+  +D++G     ++  H + ++  D FTKWV  +   +V+ + + K I   +   YG P KII +      +++  ELC  F  +    SH
Sbjct:   47 EKKKVLRECHENDTGAH---HGISRTLTLVESSYYWTSVTNDVKQWVYACQHCQVAKNTVILAPKQHLLKVENPW--SIVTVDLMGPFH-TSNRSHVYAIIMTDLFTKWVVILPLCDVSASEISKAI-INIFFLYGPPQKIIMDQRDEFIHQINVELCELFGTKQIVISH 209

[Close]

BLAST of HO067576 vs. SwissProt
Match: GIN1_MOUSE (Gypsy retrotransposon integrase-like protein 1 OS=Mus musculus GN=Gin1 PE=2 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 4.393e-12
Identity = 47/165 (28.48%), Postives = 82/165 (49.70%), Query Frame = 3

Query:   18 VNVNEAKEILQDIHDGSYGIHMNGHAMSRKI--LRAGYYWLTLEKDCYNYVKKCYKCQIYADN-IHAPPIPLNTLSAPWPFSMWGIDVIGMIEPKASNGHRFILVAIDYFTKWVEAVSYANVTKNVVVKFIKRELICRYGLPSKIITNNATNLNNKMMDELCATF 503
            V+  E K++L++ H+   G+H   H +SR +  + +GYYW ++  D   +V  C  CQ+  +  I AP   L  +  PW  S+  +D++G     ++  H + ++  D FTKWV  +   +V+ + + K I   +   YG P KII +       ++  EL   F
Sbjct:   65 VSEEEKKKVLRECHENGPGVH---HGISRTLTLVESGYYWTSVTNDVKQWVYACQHCQVAKNTVIVAPQQHLPMVGNPW--SVVTVDLMGPFH-TSNRSHVYAIIMTDLFTKWVMILPLCDVSASEISKAI-INIFFLYGPPQKIIMDQRDEFIEQINVELYRLF 222

[Close]

BLAST of HO067576 vs. SwissProt
Match: GIN1_MACFA (Gypsy retrotransposon integrase-like protein 1 OS=Macaca fascicularis GN=GIN1 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 5.737e-12
Identity = 47/173 (27.17%), Postives = 83/173 (47.98%), Query Frame = 3

Query:   18 VNVNEAKEILQDIHDGSYGIHMNGHAMSRKI--LRAGYYWLTLEKDCYNYVKKCYKCQIYADNIHAPPIPLNTLSAPWPFSMWGIDVIGMIEPKASNGHRFILVAIDYFTKWVEAVSYANVTKNVVVKFIKRELICRYGLPSKIITNNATNLNNKMMDELCATFKIQHHNSSH 530
            V+  E K++L++ H+   G H   H +SR +  + + YYW ++  D   +V  C  CQ+  + +   P   + L    P+S+  +D++G     ++  H + ++  D FTKWV  +   +V+ + V K I   +   YG P KII +       ++  EL   F I+    SH
Sbjct:   65 VSEEEKKKVLRECHENDSGAH---HGISRTLTLVESNYYWTSVTNDVKQWVYACQHCQVAKNTVIVAP-KQHLLKVENPWSLVTVDLMGPFH-TSNRSHVYAIIMTDLFTKWVVILPLCDVSASEVSKAI-INIFFLYGPPQKIIMDQRDEFIQQINIELYRLFGIKQIVISH 231

[Close]

BLAST of HO067576 vs. SwissProt
Match: GIN1_HUMAN (Gypsy retrotransposon integrase-like protein 1 OS=Homo sapiens GN=GIN1 PE=2 SV=3)

HSP 1 Score: 70.0922 bits (170), Expect = 7.493e-12
Identity = 46/173 (26.59%), Postives = 83/173 (47.98%), Query Frame = 3

Query:   18 VNVNEAKEILQDIHDGSYGIHMNGHAMSRKI--LRAGYYWLTLEKDCYNYVKKCYKCQIYADNIHAPPIPLNTLSAPWPFSMWGIDVIGMIEPKASNGHRFILVAIDYFTKWVEAVSYANVTKNVVVKFIKRELICRYGLPSKIITNNATNLNNKMMDELCATFKIQHHNSSH 530
            V+  E K++L++ H+   G H   H +SR +  + + YYW ++  D   +V  C  CQ+  + +   P   + L    P+S+  +D++G     ++  H + ++  D FTKW+  +   +V+ + V K I   +   YG P KII +       ++  EL   F I+    SH
Sbjct:   65 VSEEEKKKVLRECHENDSGAH---HGISRTLTLVESNYYWTSVTNDVKQWVYACQHCQVAKNTVIVAP-KQHLLKVENPWSLVTVDLMGPFH-TSNRSHVYAIIMTDLFTKWIVILPLCDVSASEVSKAI-INIFFLYGPPQKIIMDQRDEFIQQINIELYRLFGIKQIVISH 231

[Close]

BLAST of HO067576 vs. SwissProt
Match: GIN1_PONAB (Gypsy retrotransposon integrase-like protein 1 OS=Pongo abelii GN=GIN1 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 9.786e-12
Identity = 46/173 (26.59%), Postives = 83/173 (47.98%), Query Frame = 3

Query:   18 VNVNEAKEILQDIHDGSYGIHMNGHAMSRKI--LRAGYYWLTLEKDCYNYVKKCYKCQIYADNIHAPPIPLNTLSAPWPFSMWGIDVIGMIEPKASNGHRFILVAIDYFTKWVEAVSYANVTKNVVVKFIKRELICRYGLPSKIITNNATNLNNKMMDELCATFKIQHHNSSH 530
            V+  E K++L++ H+   G H   H +SR +  + + YYW ++  D   +V  C  CQ+  + +   P   + L    P+S+  +D++G     ++  H + ++  D FTKW+  +   +V+ + V K I   +   YG P KII +       ++  EL   F I+    SH
Sbjct:   65 VSEEEKKKVLRECHENDSGAH---HGISRTLTLVESNYYWTSVTNDVKQWVYACQHCQVAKNTVIVAP-KQHLLKVENPWSLVTVDLMGPFH-TSNRSHVYAVIMTDLFTKWIVILPLCDVSASEVSKAI-INIFFLYGPPQKIIMDQRDEFIQQINIELYRLFGIKQIVISH 231

[Close]

BLAST of HO067576 vs. SwissProt
Match: YRD6_CAEEL (Uncharacterized protein K02A2.6 OS=Caenorhabditis elegans GN=K02A2.6 PE=2 SV=1)

HSP 1 Score: 60.8474 bits (146), Expect = 4.546e-9
Identity = 45/166 (27.11%), Postives = 80/166 (48.19%), Query Frame = 3

Query:   36 KEILQDIHDGSYGIHMNGHAMSRKILRAGYYWLTLEKDCYNYVKKCYKCQIYADNIHAPPI-PLNTLSAPW-PFSMWGIDVIGMIEPKASNGHRFILVAIDYFTKWVEAVSYANVTKNVVVKFIKRELICRYGLPSKIITNNATNLNNKMMDELCATFKIQHHNSS 527
            K +L+ +H+G  GI        ++  R+  +W  L+ D  N V+ C  CQ   +N   P + PLN    P  P+    ID  G +     NG  ++LV +D  TK+ E     +++    +  ++ E+   +G P  II++N T L + +  ++C +  I+H  S+
Sbjct:  784 KIVLKQLHEGHPGI-----VQMKQKARSFVFWRGLDSDIENMVRHCNNCQ---ENSKMPRVVPLNPWPVPEAPWKRIHIDFAGPL-----NGC-YLLVVVDAKTKYAEVKLTRSISAVTTIDLLE-EIFSIHGYPETIISDNGTQLTSHLFAQMCQSHGIEHKTSA 934

[Close]

BLAST of HO067576 vs. SwissProt
Match: POL_AVIRE (Pol polyprotein (Fragment) OS=Avian reticuloendotheliosis virus GN=pol PE=3 SV=1)

HSP 1 Score: 57.7658 bits (138), Expect = 3.848e-8
Identity = 41/161 (25.47%), Postives = 76/161 (47.20%), Query Frame = 3

Query:   36 KEILQDIHDGSYGIHMNGHAMSRKILRAGYYWLTLEKDCYNYVKKCYKCQIYADNIHAPPIP--LNT-LSAPWPFSMWGIDVIGMIEPKASNGHRFILVAIDYFTKWVEAVSYANVTKNVVVKFIKRELICRYGLPSKIITNNATNLNNKMMDELCATFKI 509
            +++L+  H  ++     G +   +++R  Y    + +   +   +C  C     N  A P+   LN+ +    P   W +D   MI  K   G++++LV +D F+ WVEA      T  VV+K +  ++I R+GLP +I ++N      K+  +LC    +
Sbjct:  121 RKVLEQTHRATH----LGESKLTELVRKHYPICGIYRAARDITTRCVACAQV--NPRAAPVEKGLNSRIRGAAPGEHWEVDFTEMITAKG--GYKYLLVLVDTFSGWVEAYPAKRETSQVVIKHLILDIIPRFGLPVQIGSDNGPAFVAKVTQQLCEALNV 273

[Close]

BLAST of HO067576 vs. SwissProt
Match: NYNRI_HUMAN (Protein NYNRIN OS=Homo sapiens GN=NYNRIN PE=1 SV=3)

HSP 1 Score: 53.5286 bits (127), Expect = 7.257e-7
Identity = 34/142 (23.94%), Postives = 68/142 (47.89%), Query Frame = 3

Query:   36 KEILQDIHDGSYGIHMNGHAMSRKILRAGYYWLTLEKDCYNYVKKCYKCQIYADNIHAPPIPLNTLSAPWPF---SMWG---IDVIGMIEPKASNGHRFILVAIDYFTKWVEAVSYANVTKNVVVKFIKRELICRYGLPSKI 443
            ++++  +HD   G H       +K+   G+ W  +++   +Y + C  C I  + I +    L  + +PWP    + W    I+V+G +   +  GH+ +L+  D  T+WVEA      T   V + + + +  R+G+P ++
Sbjct: 1542 RDLIFSVHDIPLGAHQRPEETYKKLRLLGW-WPGMQEHVKDYCRSCLFC-IPRNLIGSE---LKVIESPWPLRSTAPWSNLQIEVVGPVTI-SEEGHKHVLIVADPNTRWVEAFPLKPYTHTAVAQVLLQHVFARWGVPVRL 1677

[Close]

BLAST of HO067576 vs. TrEMBL
Match: Q6WAY3_PEA (Gag/pol polyprotein OS=Pisum sativum PE=4 SV=1)

HSP 1 Score: 284.263 bits (726), Expect = 3.228e-75
Identity = 120/175 (68.57%), Postives = 151/175 (86.29%), Query Frame = 3

Query:    3 VLLRCVNVNEAKEILQDIHDGSYGIHMNGHAMSRKILRAGYYWLTLEKDCYNYVKKCYKCQIYADNIHAPPIPLNTLSAPWPFSMWGIDVIGMIEPKASNGHRFILVAIDYFTKWVEAVSYANVTKNVVVKFIKRELICRYGLPSKIITNNATNLNNKMMDELCATFKIQHHNSS 527
            VLLRC++  EA  ++Q++H+GS+G H  GHAM++K+LRAGYYW+T+E DC+ Y +KC+KCQIYAD +H PP PLN +++PWPF+MWGID+IG IEP ASNGHRFILVAIDYFTKWVEA SYAN+TK VV +FIK+E+ICRYG+P +IIT+N +NLNNKMM ELC  FKI+HHNSS
Sbjct: 1895 VLLRCMDRPEADMLMQEVHEGSFGTHAGGHAMAKKLLRAGYYWMTMESDCFKYARKCHKCQIYADRVHVPPSPLNVMNSPWPFAMWGIDMIGKIEPTASNGHRFILVAIDYFTKWVEAASYANITKQVVTRFIKKEIICRYGVPERIITDNGSNLNNKMMKELCKDFKIEHHNSS 2069

[Close]

BLAST of HO067576 vs. TrEMBL
Match: Q2HW89_MEDTR (Integrase, catalytic region; Ribonuclease H OS=Medicago truncatula GN=MtrDRAFT_AC147774g2v1 PE=4 SV=1)

HSP 1 Score: 284.263 bits (726), Expect = 3.228e-75
Identity = 126/175 (72.00%), Postives = 152/175 (86.86%), Query Frame = 3

Query:    3 VLLRCVNVNEAKEILQDIHDGSYGIHMNGHAMSRKILRAGYYWLTLEKDCYNYVKKCYKCQIYADNIHAPPIPLNTLSAPWPFSMWGIDVIGMIEPKASNGHRFILVAIDYFTKWVEAVSYANVTKNVVVKFIKRELICRYGLPSKIITNNATNLNNKMMDELCATFKIQHHNSS 527
            VLLRCV+ +EA++++++IH+GS+G H  GHAM++KILRAGYYW+T+  DCYN+ K+C+KCQIYAD IH PP  LN +S+PWPFSMWGID+IG IEPKASNGHRFILVAIDYFTKWVEA SYANVTK VVV+FIK  +I RYG+P++IIT+N TNLNN MM ELC  FKIQHHNSS
Sbjct:  614 VLLRCVDKHEAEKLMREIHEGSFGTHSCGHAMAKKILRAGYYWITMHADCYNHAKRCHKCQIYADKIHIPPSMLNVISSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKWVEAASYANVTKQVVVRFIKNNIISRYGVPNRIITDNGTNLNNNMMKELCDDFKIQHHNSS 788

[Close]

BLAST of HO067576 vs. TrEMBL
Match: A2Q2J0_MEDTR (RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H OS=Medicago truncatula GN=MtrDRAFT_AC150891g48v2 PE=4 SV=1)

HSP 1 Score: 283.493 bits (724), Expect = 5.505e-75
Identity = 123/175 (70.29%), Postives = 147/175 (84.00%), Query Frame = 3

Query:    3 VLLRCVNVNEAKEILQDIHDGSYGIHMNGHAMSRKILRAGYYWLTLEKDCYNYVKKCYKCQIYADNIHAPPIPLNTLSAPWPFSMWGIDVIGMIEPKASNGHRFILVAIDYFTKWVEAVSYANVTKNVVVKFIKRELICRYGLPSKIITNNATNLNNKMMDELCATFKIQHHNSS 527
            VLLRCV+ +EA++++ D+HDG++G H  GH MSRK+LRAGYYW+ +E DCY + +KC+KCQIYAD IH PP  LN +S+PWPFSMWGID+IG IEPKASNGHRFILVAIDYFTKWVEA SY NVTK VV KFIK  +ICRYG+PSKIIT+N TNLNN ++  LC  FKI+HHNSS
Sbjct:  779 VLLRCVDEHEAEQLMHDVHDGTFGTHATGHTMSRKLLRAGYYWMAMEHDCYQHARKCHKCQIYADKIHVPPHALNVISSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKWVEAASYTNVTKQVVAKFIKNNIICRYGVPSKIITDNGTNLNNNVVQALCEEFKIEHHNSS 953

[Close]

BLAST of HO067576 vs. TrEMBL
Match: Q1S5K2_MEDTR (Probable integrase-common tobacco-related OS=Medicago truncatula GN=MtrDRAFT_AC147431g18v2 PE=4 SV=1)

HSP 1 Score: 244.973 bits (624), Expect = 2.170e-63
Identity = 108/144 (75.00%), Postives = 122/144 (84.72%), Query Frame = 3

Query:   96 MSRKILRAGYYWLTLEKDCYNYVKKCYKCQIYADNIHAPPIPLNTLSAPWPFSMWGIDVIGMIEPKASNGHRFILVAIDYFTKWVEAVSYANVTKNVVVKFIKRELICRYGLPSKIITNNATNLNNKMMDELCATFKIQHHNSS 527
            MSRK+LRAGYYW+ +E DCY Y +KC+KCQIYAD IH PP  LN +S+PWPFSMWGID+IG IEPKASNGHRFILVAIDYFTKWVEA SY NVTK VV KFIK  +ICRYG+PSKIIT+N TNLNN ++  LC  FKI+HHNSS
Sbjct:    1 MSRKLLRAGYYWMAMEHDCYQYARKCHKCQIYADKIHVPPHALNVISSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKWVEAASYTNVTKQVVAKFIKNNIICRYGVPSKIITDNGTNLNNNVVQALCEEFKIEHHNSS 144

[Close]

BLAST of HO067576 vs. TrEMBL
Match: Q40580_TOBAC (Integrase (Fragment) OS=Nicotiana tabacum GN=str246N PE=4 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 2.251e-52
Identity = 91/150 (60.67%), Postives = 117/150 (78.00%), Query Frame = 3

Query:   78 HMNGHAMSRKILRAGYYWLTLEKDCYNYVKKCYKCQIYADNIHAPPIPLNTLSAPWPFSMWGIDVIGMIEPKASNGHRFILVAIDYFTKWVEAVSYANVTKNVVVKFIKRELICRYGLPSKIITNNATNLNNKMMDELCATFKIQHHNSS 527
            HMNG  +S+KILRAGY+W+T+E DC  YV+KC++CQIYAD +  PP  LN  SAPWPF+ WG+D+IG IEP ASN H+FILVAIDYFTKWVEA SY  VTK VV  F++  ++CR+ +P  IIT+NA NL++ +M  +C TFKI+H NS+
Sbjct:   26 HMNGFVLSKKILRAGYFWMTMETDCIRYVQKCHQCQIYADMMRVPPNKLNATSAPWPFAAWGMDIIGPIEPTASNWHKFILVAIDYFTKWVEAASYKVVTKKVVTDFVRDCIVCRFEVPESIITDNAANLHSALMKAMCDTFKIKHKNST 175

[Close]

BLAST of HO067576 vs. TrEMBL
Match: A5BDL7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_012606 PE=4 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 1.905e-51
Identity = 89/175 (50.86%), Postives = 127/175 (72.57%), Query Frame = 3

Query:    3 VLLRCVNVNEAKEILQDIHDGSYGIHMNGHAMSRKILRAGYYWLTLEKDCYNYVKKCYKCQIYADNIHAPPIPLNTLSAPWPFSMWGIDVIGMIEPKASNGHRFILVAIDYFTKWVEAVSYANVTKNVVVKFIKRELICRYGLPSKIITNNATNLNNKMMDELCATFKIQHHNSS 527
            +LL C++   A  +++++H G  G HM GH ++RKI+R GY+WLT+E DC  +V+KC +CQI+ D IHAPP  L+ L++PWPFS+WGID+IG + PK+S+GH FILVAIDYFTKWVEA SYA +T   V  FI+  +ICRYG+P ++I++   +   + +D L   + I+HH SS
Sbjct:  829 MLLLCLDRASADRVMREVHSGVCGPHMGGHMLARKIMRTGYFWLTMETDCCQFVQKCPECQIHGDLIHAPPSELHALTSPWPFSVWGIDIIGKVSPKSSSGHEFILVAIDYFTKWVEAASYARLTSARVASFIRSHIICRYGVPHELISDRGVHFRAE-VDTLLQKYAIRHHRSS 1002

[Close]

BLAST of HO067576 vs. TrEMBL
Match: A5C6U7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_004899 PE=4 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 2.489e-51
Identity = 89/175 (50.86%), Postives = 127/175 (72.57%), Query Frame = 3

Query:    3 VLLRCVNVNEAKEILQDIHDGSYGIHMNGHAMSRKILRAGYYWLTLEKDCYNYVKKCYKCQIYADNIHAPPIPLNTLSAPWPFSMWGIDVIGMIEPKASNGHRFILVAIDYFTKWVEAVSYANVTKNVVVKFIKRELICRYGLPSKIITNNATNLNNKMMDELCATFKIQHHNSS 527
            VLL C++   A  +++++H G  G HM GH ++RKI+R GY+WLT+E DC  +V++C +CQI+ D IH PP  L+ L++PWPFS+WGID+IG I PK+S+GH FILVAIDYFTKWVEA SYA +T + V  FI+  +ICRYG+P ++I++   +   + +D L   + I+HH SS
Sbjct: 1205 VLLLCLDRASADRVMREVHAGVCGPHMGGHMLARKIMRTGYFWLTMETDCCQFVQRCPECQIHGDLIHVPPSELHALTSPWPFSVWGIDIIGKISPKSSSGHEFILVAIDYFTKWVEAASYARLTSSGVASFIRSHIICRYGVPHELISDRGVHFRAE-VDTLVQRYSIRHHRSS 1378

[Close]

BLAST of HO067576 vs. TrEMBL
Match: A5BSJ3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_008285 PE=4 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 3.250e-51
Identity = 88/175 (50.29%), Postives = 127/175 (72.57%), Query Frame = 3

Query:    3 VLLRCVNVNEAKEILQDIHDGSYGIHMNGHAMSRKILRAGYYWLTLEKDCYNYVKKCYKCQIYADNIHAPPIPLNTLSAPWPFSMWGIDVIGMIEPKASNGHRFILVAIDYFTKWVEAVSYANVTKNVVVKFIKRELICRYGLPSKIITNNATNLNNKMMDELCATFKIQHHNSS 527
            +LL C++   A  +++++H G  G HM GH ++RKI+R GY+WLT+E DC  +V++C +CQI+ D IH PP  L+ L++PWPFS+WGID+IG I PK+S+GH FILVAIDYFTKWVEA SYA +T + V  FI+  +ICRYG+P ++I++   +   + +D L   + I+HH SS
Sbjct: 1871 MLLLCLDRTSADRVMREVHAGVCGPHMGGHMLARKIMRTGYFWLTMETDCCQFVQRCPECQIHGDLIHVPPSELHALTSPWPFSVWGIDIIGKISPKSSSGHEFILVAIDYFTKWVEAASYARLTSSGVASFIRSHIICRYGVPHELISDRGVHFRAE-VDTLVQRYSIRHHRSS 2044

[Close]

BLAST of HO067576 vs. TrEMBL
Match: A5B3D7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_000572 PE=4 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 3.250e-51
Identity = 89/175 (50.86%), Postives = 127/175 (72.57%), Query Frame = 3

Query:    3 VLLRCVNVNEAKEILQDIHDGSYGIHMNGHAMSRKILRAGYYWLTLEKDCYNYVKKCYKCQIYADNIHAPPIPLNTLSAPWPFSMWGIDVIGMIEPKASNGHRFILVAIDYFTKWVEAVSYANVTKNVVVKFIKRELICRYGLPSKIITNNATNLNNKMMDELCATFKIQHHNSS 527
            +LL C++   A  +++++H G  G HM GH ++RKI+R GY+WLT+E DC  +V+KC +CQI+ D IHAPP  L+ L++PWPFS+WGID+IG + PK+S+GH FILVAIDYFTKWVEA SYA +T   V  FI+  +ICRYG+P ++I++   +   + +D L   + I+HH SS
Sbjct: 1656 MLLLCLDRASADRVMREVHAGVCGPHMGGHMLARKIMRTGYFWLTMETDCCQFVQKCPECQIHGDLIHAPPSELHALTSPWPFSVWGIDIIGKVSPKSSSGHEFILVAIDYFTKWVEAASYARLTSARVASFIRSHIICRYGVPHELISDRGVHFRAE-VDTLLQKYAIRHHRSS 1829

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BLAST of HO067576 vs. TrEMBL
Match: A5AZ81_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_004793 PE=4 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 3.250e-51
Identity = 88/175 (50.29%), Postives = 127/175 (72.57%), Query Frame = 3

Query:    3 VLLRCVNVNEAKEILQDIHDGSYGIHMNGHAMSRKILRAGYYWLTLEKDCYNYVKKCYKCQIYADNIHAPPIPLNTLSAPWPFSMWGIDVIGMIEPKASNGHRFILVAIDYFTKWVEAVSYANVTKNVVVKFIKRELICRYGLPSKIITNNATNLNNKMMDELCATFKIQHHNSS 527
            +LL C++   A  +++++H G  G HM GH ++RKI+R GY+WLT+E DC  +V++C +CQI+ D IH PP  L+ L++PWPFS+WGID+IG I PK+S+GH FILVAIDYFTKWVEA SYA +T + V  FI+  +ICRYG+P ++I++   +   + +D L   + I+HH SS
Sbjct: 1749 MLLLCLDRTSADRVMREVHAGVCGPHMGGHMLARKIMRTGYFWLTMETDCCQFVQRCPECQIHGDLIHVPPSELHALTSPWPFSVWGIDIIGKISPKSSSGHEFILVAIDYFTKWVEAASYARLTSSGVASFIRSHIICRYGVPHELISDRGVHFRAE-VDTLVQRYSIRHHRSS 1922

The following BLAST results are available for this feature:

BLAST of HO067576 vs. SwissProt
BLAST of HO067576 vs. TrEMBL

BLAST of HO067576 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
POL4_DROME	4.693e-14	28.99	Retrovirus-related Pol polyprotein from transposon...	[more]
GIN1_RAT	3.363e-12	28.48	Gypsy retrotransposon integrase-like protein 1 OS=...	[more]
GIN1_BOVIN	3.363e-12	28.24	Gypsy retrotransposon integrase-like protein 1 OS=...	[more]
GIN1_MOUSE	4.393e-12	28.48	Gypsy retrotransposon integrase-like protein 1 OS=...	[more]
GIN1_MACFA	5.737e-12	27.17	Gypsy retrotransposon integrase-like protein 1 OS=...	[more]
GIN1_HUMAN	7.493e-12	26.59	Gypsy retrotransposon integrase-like protein 1 OS=...	[more]
GIN1_PONAB	9.786e-12	26.59	Gypsy retrotransposon integrase-like protein 1 OS=...	[more]
YRD6_CAEEL	4.546e-9	27.11	Uncharacterized protein K02A2.6 OS=Caenorhabditis ...	[more]
POL_AVIRE	3.848e-8	25.47	Pol polyprotein (Fragment) OS=Avian reticuloendoth...	[more]
NYNRI_HUMAN	7.257e-7	23.94	Protein NYNRIN OS=Homo sapiens GN=NYNRIN PE=1 SV=3	[more]

BLAST of HO067576 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
Q6WAY3_PEA	3.228e-75	68.57	Gag/pol polyprotein OS=Pisum sativum PE=4 SV=1	[more]
Q2HW89_MEDTR	3.228e-75	72.00	Integrase, catalytic region; Ribonuclease H OS=Med...	[more]
A2Q2J0_MEDTR	5.505e-75	70.29	RNA-directed DNA polymerase (Reverse transcriptase...	[more]
Q1S5K2_MEDTR	2.170e-63	75.00	Probable integrase-common tobacco-related OS=Medic...	[more]
Q40580_TOBAC	2.251e-52	60.67	Integrase (Fragment) OS=Nicotiana tabacum GN=str24...	[more]
A5BDL7_VITVI	1.905e-51	50.86	Putative uncharacterized protein OS=Vitis vinifera...	[more]
A5C6U7_VITVI	2.489e-51	50.86	Putative uncharacterized protein OS=Vitis vinifera...	[more]
A5BSJ3_VITVI	3.250e-51	50.29	Putative uncharacterized protein OS=Vitis vinifera...	[more]
A5B3D7_VITVI	3.250e-51	50.86	Putative uncharacterized protein OS=Vitis vinifera...	[more]
A5AZ81_VITVI	3.250e-51	50.29	Putative uncharacterized protein OS=Vitis vinifera...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001584	Integrase, catalytic core	PFAM	PF00665	rve	coord: 79..174 score: 1.1
IPR001584	Integrase, catalytic core	PROFILE	PS50994	INTEGRASE	coord: 76..176 score: 14
IPR012337	Ribonuclease H-like	SUPERFAMILY	53098	Ribonuclease H-like	coord: 75..175 score: 1.9
None	No IPR available	GENE3D	3.30.420.10	no description	coord: 81..174 score: 3.5
None	No IPR available	PANTHER	PTHR10178	GAG/POL/ENV POLYPROTEIN	coord: 13..175 score: 3.1
None	No IPR available	PANTHER	PTHR10178:SF14	RETROVIRUS POLYPROTEIN	coord: 13..175 score: 3.1

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>HO067576 ID=HO067576; Name=HO067576; organism=Cicer arietinum; type=EST; length=532bp
AGGTACTCCTCAGATGTGTTAATGTTAATGAGGCGAAGGAAATTCTACAA
GATATCCACGATGGCTCTTATGGGATCCATATGAATGGACACGCCATGTC
TAGAAAGATTCTTCGGGCCGGATATTATTGGCTCACCCTAGAAAAAGATT
GTTATAATTATGTAAAGAAATGTTATAAATGTCAAATATATGCTGATAAT
ATCCACGCCCCACCAATACCCCTGAACACCCTTTCAGCGCCCTGGCCATT
CTCGATGTGGGGCATAGACGTCATCGGAATGATCGAACCGAAAGCATCAA
ATGGACATCGCTTCATCTTGGTGGCAATTGATTACTTTACCAAGTGGGTA
GAGGCAGTTTCATACGCCAATGTAACCAAAAATGTGGTAGTCAAATTTAT
AAAAAGGGAATTAATATGTCGTTATGGTCTACCAAGCAAGATCATTACTA
ACAATGCCACAAACCTAAATAACAAAATGATGGATGAATTGTGTGCCACC
TTTAAAATTCAACACCACAATTCGTCCCATAC

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding
GO:0003676	nucleic acid binding

Vocabulary: **Biological Process**
Term	Definition
GO:0015074	DNA integration

Vocabulary: **INTERPRO**
Term	Definition
IPR001584	Integrase_cat-core
IPR012337	RNaseH-like_sf

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