EH059150

EST Overview
NameEH059150
Unique NameEH059150
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length476
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide2011-02-03
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Homology
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BLAST of EH059150 vs. TAIR peptide
Match: AT3G48030.1 (| Symbols: | hypoxia-responsive family protein / zinc finger (C3HC4-type RING finger) family protein | chr3:17725410-17727954 REVERSE LENGTH=349)

HSP 1 Score: 52.373 bits (124), Expect = 1.412e-7
Identity = 24/38 (63.16%), Postives = 29/38 (76.32%), Query Frame = -1 
Query:  357 EPGFEDFCEDQKRDRNPFVPVGAINTAGVLTAGFTSFR 470
            EP  ED  +++KR RNP VP+GA+ TAGVLTAG  SFR
Sbjct:    5 EPDMEDLFQEKKRVRNPLVPLGALMTAGVLTAGLISFR 42

HSP 2 Score: 49.6766 bits (117), Expect = 9.150e-7
Identity = 29/73 (39.73%), Postives = 39/73 (53.42%), Query Frame = -2 
Query:  254 LNPGSKIFVKTRSAIGTLLSPLAQLILPVCLRLALPALDTGNFKIGQKFMRACVVVQGATIAFMVGTA**YGD 472
            + P  +   + +  +   L PL  L+    L   L +   GN ++GQ  MRA VVVQGAT+A MVGT   YGD
Sbjct:    4 VEPDMEDLFQEKKRVRNPLVPLGALMTAGVLTAGLISFRRGNSQLGQVLMRARVVVQGATVALMVGTGYYYGD 76
The following BLAST results are available for this feature:
BLAST of EH059150 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT3G48030.11.412e-763.16| Symbols: | hypoxia-responsive family protein / ... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007667Hypoxia induced protein, conserved regionPFAMPF04588HIG_1_Ncoord: 20..67
score: 5.7
NoneNo IPR availableSEGsegsegcoord: 45..56
score

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>EH059150 ID=EH059150; Name=EH059150; organism=Cicer arietinum; type=EST; length=476bp
CCGGCTTCCTCAGGAACGCAACAGTCACTGTGAAAGTTAATTATTTTTAT
GGAAAGAAGTATAGTAATACTTCCATTATAAAATTCACTTGGTAATGCGT
GGAAGGAAAAGTGATCAATTTTAAGATGTGGGCAAGGATTTGGTCCTCAA
ATGACCAAATTTCCATTTCACATAACCAAAATTAACACCACCAAAAGACC
AAGCAATAATCTATTAACTCTATTAAAAGTTAATTTCGCTGTGCCAAGGT
ATAATCGCCATATTATTAGGCAGTGCCAACCATGAAAGCAATTGTAGCAC
CTTGGACAACCACACAAGCCCTCATAAACTTCTGGCCTATCTTAAAATTA
CCTGTGTCTAAAGCTGGTAAAGCCAGCCGTAAGCACACCGGCAGTATTAA
TTGCGCCAACGGGGACAAAAGGGTTCCTATCGCGCTTCTGGTCTTCACAA
AAATCTTCGAACCCGGGTTCAGAATT
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: INTERPRO
TermDefinition
IPR007667Hypoxia_induced_domain