GR912394
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GR912394 vs. SwissProt
Match: TC120_ARATH (Translocase of chloroplast 120, chloroplastic OS=Arabidopsis thaliana GN=TOC120 PE=1 SV=1) HSP 1 Score: 62.7734 bits (151), Expect = 6.448e-10 Identity = 34/77 (44.16%), Postives = 50/77 (64.94%), Query Frame = 3 Query: 135 KETTQISKKPDTEAVSSSGKSVATTTTLVP--PAGLGSAAPLLKSAPRVVQQPRVNNTVSNLQSQKLDESSSGEAEE 359 KE+ + ++ + + S +S + T L P PAGLG AAPLL+ APRV QQPRVN VS+ Q Q+ ++S++ E +E Sbjct: 302 KESQHMERESEVLSSVSPTESRSDTAALPPARPAGLGRAAPLLEPAPRVTQQPRVNGNVSHNQPQQAEDSTTAETDE 378
BLAST of GR912394 vs. TrEMBL
Match: D7U585_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_38.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00024062001 PE=4 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 5.733e-12 Identity = 43/105 (40.95%), Postives = 63/105 (60.00%), Query Frame = 3 Query: 60 ENLGNYENFSVVGELKKIPEKNAKQKE-----TTQISKKPDTEAVSSSGKSVATTTTLVPPAGLGSAAPLLKSAPRVVQQPRVNNTVSNLQSQKLDESSSGEAEE 359 EN+ +N VV E ++ E N ++++ + +P + SSSG+S PAGLG AAPLL+ A RVVQQPRVN T S +Q+Q ++++ +GEAEE Sbjct: 68 ENVAEVKNKYVVFEEQETKEPNMEKEDQKIQGNREREIRPAEQVASSSGRSSNPGPPPAHPAGLGRAAPLLEPASRVVQQPRVNGTTSQVQAQLIEDAGNGEAEE 172
BLAST of GR912394 vs. TrEMBL
Match: B9SQL1_RICCO (Protein translocase, putative OS=Ricinus communis GN=RCOM_0739500 PE=4 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 9.153e-10 Identity = 41/90 (45.56%), Postives = 57/90 (63.33%), Query Frame = 3 Query: 105 KKIPEKNAKQKETTQISKKPD----TEAVSSSGKSVATTTTLVPPAGLGSAAPLLKSAPR-VVQQPRVNNTVSNLQSQKLDESSSGEAEE 359 KK EK+ QK TQ + + + E SSS KS PAGLG AAPLL+ APR V+QQ RVN T+S++QSQ++++ ++GE +E Sbjct: 378 KKEAEKDRGQKPNTQKNGQGEILTSAEDASSSVKSTGPAPPPARPAGLGRAAPLLEPAPRSVLQQQRVNGTMSHVQSQQVEDPTNGEGDE 467
BLAST of GR912394 vs. TrEMBL
Match: B9HR93_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_200844 PE=4 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 9.153e-10 Identity = 33/60 (55.00%), Postives = 43/60 (71.67%), Query Frame = 3 Query: 180 SSSGKSVATTTTLVPPAGLGSAAPLLKSAPRVVQQPRVNNTVSNLQSQKLDESSSGEAEE 359 SSS KS + PAGLG AAPLL+ APR VQQPR N VS+ QSQ++++ ++GE+EE Sbjct: 1 SSSAKSSSAAPAPSRPAGLGRAAPLLEPAPRAVQQPRANGAVSHTQSQQIEDPTNGESEE 60
BLAST of GR912394 vs. TrEMBL
Match: D7L653_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_479127 PE=4 SV=1) HSP 1 Score: 64.6994 bits (156), Expect = 3.478e-9 Identity = 35/77 (45.45%), Postives = 50/77 (64.94%), Query Frame = 3 Query: 135 KETTQISKKPDTEAVSSSGKSVATTTTLVP--PAGLGSAAPLLKSAPRVVQQPRVNNTVSNLQSQKLDESSSGEAEE 359 KE+ + ++ + + S +S T L P PAGLG AAPLL+ APRV QQPRVN VS+ Q Q+ ++S++GE +E Sbjct: 283 KESQHVERESEVLSSVSPTESRINTAALPPARPAGLGRAAPLLEPAPRVPQQPRVNGNVSHNQPQQAEDSTTGETDE 359
BLAST of GR912394 vs. TAIR peptide
Match: AT3G16620.1 (| Symbols: ATTOC120, TOC120 | translocon outer complex protein 120 | chr3:5658469-5661738 REVERSE LENGTH=1089) HSP 1 Score: 62.7734 bits (151), Expect = 5.144e-11 Identity = 34/77 (44.16%), Postives = 50/77 (64.94%), Query Frame = 3 Query: 135 KETTQISKKPDTEAVSSSGKSVATTTTLVP--PAGLGSAAPLLKSAPRVVQQPRVNNTVSNLQSQKLDESSSGEAEE 359 KE+ + ++ + + S +S + T L P PAGLG AAPLL+ APRV QQPRVN VS+ Q Q+ ++S++ E +E Sbjct: 302 KESQHMERESEVLSSVSPTESRSDTAALPPARPAGLGRAAPLLEPAPRVTQQPRVNGNVSHNQPQQAEDSTTAETDE 378
BLAST of GR912394 vs. TAIR peptide
Match: AT2G16640.1 (| Symbols: ATTOC132, TOC132 | multimeric translocon complex in the outer envelope membrane 132 | chr2:7211489-7215109 REVERSE LENGTH=1206) HSP 1 Score: 50.447 bits (119), Expect = 2.642e-7 Identity = 29/76 (38.16%), Postives = 45/76 (59.21%), Query Frame = 3 Query: 138 ETTQISKKPDTEAVSSSGKSVATTTTLVP--PAGLGSAAPLLKSAPRVVQQPRVNNTVSNLQSQKLDESSSGEAEE 359 E + + +P+ + S +S + L P PAGLG A+PLL+ A R QQ RVN S+ Q Q+ ++S++ EA+E Sbjct: 421 ENSHVETEPEVVSSVSPTESRSNPAALPPARPAGLGRASPLLEPASRAPQQSRVNGNGSHNQFQQAEDSTTTEADE 496 The following BLAST results are available for this feature:
BLAST of GR912394 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot) Total hits: 1
BLAST of GR912394 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl) Total hits: 4
BLAST of GR912394 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide) Total hits: 2
InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GR912394 ID=GR912394; Name=GR912394; organism=Cicer arietinum; type=EST; length=360bpback to top |