GR912394

EST Overview
NameGR912394
Unique NameGR912394
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length360
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Homology
BLAST of GR912394 vs. SwissProt
Match: TC120_ARATH (Translocase of chloroplast 120, chloroplastic OS=Arabidopsis thaliana GN=TOC120 PE=1 SV=1)

HSP 1 Score: 62.7734 bits (151), Expect = 6.448e-10
Identity = 34/77 (44.16%), Postives = 50/77 (64.94%), Query Frame = 3
Query:  135 KETTQISKKPDTEAVSSSGKSVATTTTLVP--PAGLGSAAPLLKSAPRVVQQPRVNNTVSNLQSQKLDESSSGEAEE 359
            KE+  + ++ +  +  S  +S + T  L P  PAGLG AAPLL+ APRV QQPRVN  VS+ Q Q+ ++S++ E +E
Sbjct:  302 KESQHMERESEVLSSVSPTESRSDTAALPPARPAGLGRAAPLLEPAPRVTQQPRVNGNVSHNQPQQAEDSTTAETDE 378          
BLAST of GR912394 vs. TrEMBL
Match: D7U585_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_38.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00024062001 PE=4 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 5.733e-12
Identity = 43/105 (40.95%), Postives = 63/105 (60.00%), Query Frame = 3
Query:   60 ENLGNYENFSVVGELKKIPEKNAKQKE-----TTQISKKPDTEAVSSSGKSVATTTTLVPPAGLGSAAPLLKSAPRVVQQPRVNNTVSNLQSQKLDESSSGEAEE 359
            EN+   +N  VV E ++  E N ++++       +   +P  +  SSSG+S         PAGLG AAPLL+ A RVVQQPRVN T S +Q+Q ++++ +GEAEE
Sbjct:   68 ENVAEVKNKYVVFEEQETKEPNMEKEDQKIQGNREREIRPAEQVASSSGRSSNPGPPPAHPAGLGRAAPLLEPASRVVQQPRVNGTTSQVQAQLIEDAGNGEAEE 172          
BLAST of GR912394 vs. TrEMBL
Match: B9SQL1_RICCO (Protein translocase, putative OS=Ricinus communis GN=RCOM_0739500 PE=4 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 9.153e-10
Identity = 41/90 (45.56%), Postives = 57/90 (63.33%), Query Frame = 3
Query:  105 KKIPEKNAKQKETTQISKKPD----TEAVSSSGKSVATTTTLVPPAGLGSAAPLLKSAPR-VVQQPRVNNTVSNLQSQKLDESSSGEAEE 359
            KK  EK+  QK  TQ + + +     E  SSS KS         PAGLG AAPLL+ APR V+QQ RVN T+S++QSQ++++ ++GE +E
Sbjct:  378 KKEAEKDRGQKPNTQKNGQGEILTSAEDASSSVKSTGPAPPPARPAGLGRAAPLLEPAPRSVLQQQRVNGTMSHVQSQQVEDPTNGEGDE 467          
BLAST of GR912394 vs. TrEMBL
Match: B9HR93_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_200844 PE=4 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 9.153e-10
Identity = 33/60 (55.00%), Postives = 43/60 (71.67%), Query Frame = 3
Query:  180 SSSGKSVATTTTLVPPAGLGSAAPLLKSAPRVVQQPRVNNTVSNLQSQKLDESSSGEAEE 359
            SSS KS +       PAGLG AAPLL+ APR VQQPR N  VS+ QSQ++++ ++GE+EE
Sbjct:    1 SSSAKSSSAAPAPSRPAGLGRAAPLLEPAPRAVQQPRANGAVSHTQSQQIEDPTNGESEE 60          
BLAST of GR912394 vs. TrEMBL
Match: D7L653_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_479127 PE=4 SV=1)

HSP 1 Score: 64.6994 bits (156), Expect = 3.478e-9
Identity = 35/77 (45.45%), Postives = 50/77 (64.94%), Query Frame = 3
Query:  135 KETTQISKKPDTEAVSSSGKSVATTTTLVP--PAGLGSAAPLLKSAPRVVQQPRVNNTVSNLQSQKLDESSSGEAEE 359
            KE+  + ++ +  +  S  +S   T  L P  PAGLG AAPLL+ APRV QQPRVN  VS+ Q Q+ ++S++GE +E
Sbjct:  283 KESQHVERESEVLSSVSPTESRINTAALPPARPAGLGRAAPLLEPAPRVPQQPRVNGNVSHNQPQQAEDSTTGETDE 359          
BLAST of GR912394 vs. TAIR peptide
Match: AT3G16620.1 (| Symbols: ATTOC120, TOC120 | translocon outer complex protein 120 | chr3:5658469-5661738 REVERSE LENGTH=1089)

HSP 1 Score: 62.7734 bits (151), Expect = 5.144e-11
Identity = 34/77 (44.16%), Postives = 50/77 (64.94%), Query Frame = 3
Query:  135 KETTQISKKPDTEAVSSSGKSVATTTTLVP--PAGLGSAAPLLKSAPRVVQQPRVNNTVSNLQSQKLDESSSGEAEE 359
            KE+  + ++ +  +  S  +S + T  L P  PAGLG AAPLL+ APRV QQPRVN  VS+ Q Q+ ++S++ E +E
Sbjct:  302 KESQHMERESEVLSSVSPTESRSDTAALPPARPAGLGRAAPLLEPAPRVTQQPRVNGNVSHNQPQQAEDSTTAETDE 378          
BLAST of GR912394 vs. TAIR peptide
Match: AT2G16640.1 (| Symbols: ATTOC132, TOC132 | multimeric translocon complex in the outer envelope membrane 132 | chr2:7211489-7215109 REVERSE LENGTH=1206)

HSP 1 Score: 50.447 bits (119), Expect = 2.642e-7
Identity = 29/76 (38.16%), Postives = 45/76 (59.21%), Query Frame = 3
Query:  138 ETTQISKKPDTEAVSSSGKSVATTTTLVP--PAGLGSAAPLLKSAPRVVQQPRVNNTVSNLQSQKLDESSSGEAEE 359
            E + +  +P+  +  S  +S +    L P  PAGLG A+PLL+ A R  QQ RVN   S+ Q Q+ ++S++ EA+E
Sbjct:  421 ENSHVETEPEVVSSVSPTESRSNPAALPPARPAGLGRASPLLEPASRAPQQSRVNGNGSHNQFQQAEDSTTTEADE 496          
The following BLAST results are available for this feature:
BLAST of GR912394 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 1
Match NameE-valueIdentityDescription
TC120_ARATH6.448e-1044.16Translocase of chloroplast 120, chloroplastic OS=A... [more]
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BLAST of GR912394 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 4
Match NameE-valueIdentityDescription
D7U585_VITVI5.733e-1240.95Whole genome shotgun sequence of line PN40024, sca... [more]
B9SQL1_RICCO9.153e-1045.56Protein translocase, putative OS=Ricinus communis ... [more]
B9HR93_POPTR9.153e-1055.00Predicted protein (Fragment) OS=Populus trichocarp... [more]
D7L653_ARALY3.478e-945.45Putative uncharacterized protein OS=Arabidopsis ly... [more]
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BLAST of GR912394 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 2
Match NameE-valueIdentityDescription
AT3G16620.15.144e-1144.16| Symbols: ATTOC120, TOC120 | translocon outer com... [more]
AT2G16640.12.642e-738.16| Symbols: ATTOC132, TOC132 | multimeric transloco... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 31..48
score

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GR912394 ID=GR912394; Name=GR912394; organism=Cicer arietinum; type=EST; length=360bp
GATTTCGAGCGGCCGCCCGGGCAGGTACAAAGTTTTCCCGGTCTAAGATT
TAAAATGAAGAAAATCTAGGAAATTATGAAAACTTTTCCGTTGTTGGGGA
GCTAAAAAAGATACCAGAGAAAAATGCGAAACAGAAAGAAACCACTCAGA
TTTCTAAAAAACCGGATACCGAGGCTGTTTCTTCATCGGGAAAATCTGTT
GCCACTACCACCACTCTTGTTCCTCCCGCTGGCCTTGGATCTGCAGCTCC
ATTATTGAAATCTGCTCCACGGGTAGTGCAGCAGCCGCGGGTCAATAATA
CTGTATCTAATTTGCAGTCCCAAAAATTGGACGAGTCCTCATCTGGGGAG
GCTGAGGAGT
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