FE670849

EST Overview


Name	FE670849
Unique Name	FE670849
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	415

Libraries


Library Name	Type
LIBEST_022821 Chickpea leave library	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

[Close]

BLAST of FE670849 vs. SwissProt
Match: CB4C_ARATH (Chlorophyll a-b binding protein CP29.3, chloroplastic OS=Arabidopsis thaliana GN=LHCB4.3 PE=1 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 1.788e-36
Identity = 75/127 (59.06%), Postives = 85/127 (66.93%), Query Frame = 2

Query:   41 SHFFGTRLSKPSSKIGRIRCFFNLXXXXXXXXXXXXXXRQ--PEGERLVWFPGASSPEWLDGSLIGDRGFDPLGFAKPAEYLQYDLDSLDQNLAKNLAGDIIGTRIEVAEVKATPFQPYTEVCGIQR 415
            S  FG R+  P    GR++  F                RQ   +G+RLVWFPGA+ PEWLDGS+IGDRGFDP G  KPAEYLQYD D LDQNLAKN+AGDIIG   E +E+K TPFQPYTEV GIQR
Sbjct:   10 SGIFGIRIQDPRPGTGRVQARFGFSFGKKKPAPPPKKSRQVQDDGDRLVWFPGANPPEWLDGSMIGDRGFDPFGLGKPAEYLQYDFDGLDQNLAKNVAGDIIGIIQESSEIKPTPFQPYTEVFGIQR 136

[Close]

BLAST of FE670849 vs. SwissProt
Match: CB4A_ARATH (Chlorophyll a-b binding protein CP29.1, chloroplastic OS=Arabidopsis thaliana GN=LHCB4.1 PE=1 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 9.181e-33
Identity = 61/82 (74.39%), Postives = 72/82 (87.80%), Query Frame = 2

Query:  170 ERLVWFPGASSPEWLDGSLIGDRGFDPLGFAKPAEYLQYDLDSLDQNLAKNLAGDIIGTRIEVAEVKATPFQPYTEVCGIQR 415
            +R +W+PGA SP+WLDGSL+GD GFDP G  KPAEYLQ+D+DSLDQNLAKNLAGD+IGTR E A+ K+TPFQPY+EV GIQR
Sbjct:   54 DRPLWYPGAISPDWLDGSLVGDYGFDPFGLGKPAEYLQFDIDSLDQNLAKNLAGDVIGTRTEAADAKSTPFQPYSEVFGIQR 135

[Close]

BLAST of FE670849 vs. SwissProt
Match: CB4B_ARATH (Chlorophyll a-b binding protein CP29.2, chloroplastic OS=Arabidopsis thaliana GN=LHCB4.2 PE=1 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 8.594e-31
Identity = 59/82 (71.95%), Postives = 70/82 (85.37%), Query Frame = 2

Query:  170 ERLVWFPGASSPEWLDGSLIGDRGFDPLGFAKPAEYLQYDLDSLDQNLAKNLAGDIIGTRIEVAEVKATPFQPYTEVCGIQR 415
            +R +WFPGA SPE+LDGSL+GD GFDP G  KPAEYLQ+DLDSLDQNLAKNL G++IGTR E  + K+TPFQPY+EV G+QR
Sbjct:   51 DRPLWFPGAKSPEYLDGSLVGDYGFDPFGLGKPAEYLQFDLDSLDQNLAKNLYGEVIGTRTEAVDPKSTPFQPYSEVFGLQR 132

[Close]

BLAST of FE670849 vs. SwissProt
Match: CB29_CHLRE (Chlorophyll a-b binding protein CP29 OS=Chlamydomonas reinhardtii GN=Lhcb4 PE=1 SV=3)

HSP 1 Score: 79.337 bits (194), Expect = 6.610e-15
Identity = 44/95 (46.32%), Postives = 57/95 (60.00%), Query Frame = 2

Query:  155 RQPEGERLVWFPGASSPEWLDGSLIGDRGFDPLGFAKPAEYLQYDLDSLDQNLAKNLAGDIIGTRIEVAEVKATP--------FQPYTEVCGIQR 415
            R+ +G+ L W P  + PEWLDGSL GDRGFDPLG +KP+E++   +D  DQN AKN  G +       A V+ATP          PY+EV G+ R
Sbjct:   45 RKYQGDAL-WLPNTTRPEWLDGSLPGDRGFDPLGLSKPSEFVVIGVDENDQNAAKNNKGSV------EAIVQATPDEVSSENRLAPYSEVFGLAR 132

[Close]

BLAST of FE670849 vs. SwissProt
Match: CB12_PETHY (Chlorophyll a-b binding protein, chloroplastic OS=Petunia hybrida PE=2 SV=1)

HSP 1 Score: 55.8398 bits (133), Expect = 7.827e-8
Identity = 23/40 (57.50%), Postives = 30/40 (75.00%), Query Frame = 2

Query:  170 ERLVWFPGASSPEWLDGSLIGDRGFDPLGFAKPAEYLQYD 289
            +R +WFPG++ PEWLDGSL GD GFDPLG     E L+++
Sbjct:   64 DRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPESLKWN 103

[Close]

BLAST of FE670849 vs. SwissProt
Match: CB12_SOLLC (Chlorophyll a-b binding protein 7, chloroplastic OS=Solanum lycopersicum GN=CAB7 PE=3 SV=1)

HSP 1 Score: 55.0694 bits (131), Expect = 1.335e-7
Identity = 23/40 (57.50%), Postives = 30/40 (75.00%), Query Frame = 2

Query:  170 ERLVWFPGASSPEWLDGSLIGDRGFDPLGFAKPAEYLQYD 289
            +R +WFPG++ P WLDGSL GD GFDPLG A   E L+++
Sbjct:   64 DRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRWN 103

[Close]

BLAST of FE670849 vs. TrEMBL
Match: B9SLN2_RICCO (Chlorophyll A/B binding protein, putative OS=Ricinus communis GN=RCOM_0593190 PE=4 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 5.596e-36
Identity = 74/130 (56.92%), Postives = 89/130 (68.46%), Query Frame = 2

Query:   41 SHFFGTRLSKPSSKIGRIRCFFNLXXXXXXXXXXXXXXRQ-----PEGERLVWFPGASSPEWLDGSLIGDRGFDPLGFAKPAEYLQYDLDSLDQNLAKNLAGDIIGTRIEVAEVKATPFQPYTEVCGIQR 415
            SHFF TR   P  K+G+I+  F                 +     P  +RLVWFPGA+ PEWLDG+++GDRGFDP G  KPAEYLQ++LDSLDQNLAKN+AGDIIG R+E  EVK TPFQPY+EV G+QR
Sbjct:   13 SHFFRTRTQNPKPKVGKIQARFGFGGFGGFGTKKSSPPPKKTAPKPVEDRLVWFPGANPPEWLDGTMVGDRGFDPFGLGKPAEYLQFELDSLDQNLAKNVAGDIIGVRVEPNEVKPTPFQPYSEVFGLQR 142

[Close]

BLAST of FE670849 vs. TrEMBL
Match: B7FIZ5_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 7.308e-36
Identity = 76/125 (60.80%), Postives = 87/125 (69.60%), Query Frame = 2

Query:   41 SHFFGTRLSKPSSKIGRIRCFFNLXXXXXXXXXXXXXXRQPEGERLVWFPGASSPEWLDGSLIGDRGFDPLGFAKPAEYLQYDLDSLDQNLAKNLAGDIIGTRIEVAEVKATPFQPYTEVCGIQR 415
            S F GTRL +  S  GRI+  F                  P  +R +WFPGA SPEWLDGSL+GD GFDP G  KPAEYLQ+DLDSLDQNLAKNLAGD+IGTR E A+VK+TPFQPY+EV G+QR
Sbjct:   12 SSFIGTRLREVQSNSGRIQARFGFGKKKAAPKKPSRS--SPSTDRPLWFPGAKSPEWLDGSLVGDYGFDPFGLGKPAEYLQFDLDSLDQNLAKNLAGDVIGTRTEFADVKSTPFQPYSEVFGLQR 134

[Close]

BLAST of FE670849 vs. TrEMBL
Match: D7LEF5_ARALY (LHCB4.3 OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_483050 PE=4 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 8.080e-35
Identity = 74/127 (58.27%), Postives = 85/127 (66.93%), Query Frame = 2

Query:   41 SHFFGTRLSKPSSKIGRIRCFFNLXXXXXXXXXXXXXXRQ--PEGERLVWFPGASSPEWLDGSLIGDRGFDPLGFAKPAEYLQYDLDSLDQNLAKNLAGDIIGTRIEVAEVKATPFQPYTEVCGIQR 415
            S  FG R+  P    GR++  F                RQ   +G+RLVWFPGA+ PEWLDGS+IGDRGFDP G  KPAEYLQYD D LDQNLAKN+AGDIIG   + +E+K TPFQPYTEV GIQR
Sbjct:   10 SGIFGIRIQDPRPGTGRVQARFGFSFGKKKPAPPPKKSRQVQDDGDRLVWFPGANPPEWLDGSMIGDRGFDPFGLGKPAEYLQYDFDGLDQNLAKNVAGDIIGIIQDSSEIKPTPFQPYTEVFGIQR 136

[Close]

BLAST of FE670849 vs. TrEMBL
Match: B7SB30_BAMOL (LHCB4 OS=Bambusa oldhamii PE=2 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 8.080e-35
Identity = 76/125 (60.80%), Postives = 88/125 (70.40%), Query Frame = 2

Query:   41 SHFFGTRLSKPSSKIGRIRCFFNLXXXXXXXXXXXXXXRQPEGERLVWFPGASSPEWLDGSLIGDRGFDPLGFAKPAEYLQYDLDSLDQNLAKNLAGDIIGTRIEVAEVKATPFQPYTEVCGIQR 415
            S F GTRL+ P+ + GRI   F                R    +R +WFPGA +PE+LDGSL+GD GFDP+G  KPAEYLQYDLDSLDQNLAKN+AGDIIGTR E  EVK+TPFQPYTEV G+QR
Sbjct:   10 STFLGTRLADPAPQNGRIVARFGFGGKKAAPKKAA---RTSTSDRPLWFPGAVAPEYLDGSLVGDYGFDPIGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFEPGEVKSTPFQPYTEVFGLQR 131

[Close]

BLAST of FE670849 vs. TrEMBL
Match: B9SQ36_RICCO (Chlorophyll A/B binding protein, putative OS=Ricinus communis GN=RCOM_0644360 PE=4 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 2.351e-34
Identity = 72/125 (57.60%), Postives = 87/125 (69.60%), Query Frame = 2

Query:   41 SHFFGTRLSKPSSKIGRIRCFFNLXXXXXXXXXXXXXXRQPEGERLVWFPGASSPEWLDGSLIGDRGFDPLGFAKPAEYLQYDLDSLDQNLAKNLAGDIIGTRIEVAEVKATPFQPYTEVCGIQR 415
            S F GTRL    S  GR++  F                 +P  +R +W+PGA +PEWLDGSL+GD GFDP G  KPAEYLQ++LDSLDQNLAKN+AGDIIGTR E A+VK+TPFQPY+EV G+QR
Sbjct:   11 SSFMGTRLPDVYSNSGRVQARFGFGTKKSAPKRSA----KPTSDRPLWYPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQFELDSLDQNLAKNIAGDIIGTRTEAADVKSTPFQPYSEVFGLQR 131

[Close]

BLAST of FE670849 vs. TrEMBL
Match: Q6Z411_ORYSJ (Chlorophyll a/b-binding protein OS=Oryza sativa subsp. japonica GN=P0567H04.14 PE=2 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 5.237e-34
Identity = 72/125 (57.60%), Postives = 86/125 (68.80%), Query Frame = 2

Query:   41 SHFFGTRLSKPSSKIGRIRCFFNLXXXXXXXXXXXXXXRQPEGERLVWFPGASSPEWLDGSLIGDRGFDPLGFAKPAEYLQYDLDSLDQNLAKNLAGDIIGTRIEVAEVKATPFQPYTEVCGIQR 415
            S F GTRL+ P+ + GRI   F                  P  +R +WFPGA +P++LDGSL+GD GFDP G  KPAEYLQ++LDSLDQNLAKN AG+IIGTR E  EVK+TPFQPYTEV G+QR
Sbjct:   10 STFLGTRLADPAPQSGRIVARFGFGGGKKAAAKKAARPSAPTTDRPLWFPGAVAPDYLDGSLVGDYGFDPFGLGKPAEYLQFELDSLDQNLAKNNAGEIIGTRFETGEVKSTPFQPYTEVFGLQR 134

[Close]

BLAST of FE670849 vs. TrEMBL
Match: O65217_ORYSA (Chlorophyll a/b-binding protein OS=Oryza sativa GN=RCABP69 PE=2 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 5.237e-34
Identity = 72/125 (57.60%), Postives = 86/125 (68.80%), Query Frame = 2

Query:   41 SHFFGTRLSKPSSKIGRIRCFFNLXXXXXXXXXXXXXXRQPEGERLVWFPGASSPEWLDGSLIGDRGFDPLGFAKPAEYLQYDLDSLDQNLAKNLAGDIIGTRIEVAEVKATPFQPYTEVCGIQR 415
            S F GTRL+ P+ + GRI   F                  P  +R +WFPGA +P++LDGSL+GD GFDP G  KPAEYLQ++LDSLDQNLAKN AG+IIGTR E  EVK+TPFQPYTEV G+QR
Sbjct:   10 STFLGTRLADPAPQSGRIVARFGFGGGKKAAAKKAARPSAPTTDRPLWFPGAVAPDYLDGSLVGDYGFDPFGLGKPAEYLQFELDSLDQNLAKNNAGEIIGTRFETGEVKSTPFQPYTEVFGLQR 134

[Close]

BLAST of FE670849 vs. TrEMBL
Match: A2YML1_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_26463 PE=4 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 5.237e-34
Identity = 72/125 (57.60%), Postives = 86/125 (68.80%), Query Frame = 2

Query:   41 SHFFGTRLSKPSSKIGRIRCFFNLXXXXXXXXXXXXXXRQPEGERLVWFPGASSPEWLDGSLIGDRGFDPLGFAKPAEYLQYDLDSLDQNLAKNLAGDIIGTRIEVAEVKATPFQPYTEVCGIQR 415
            S F GTRL+ P+ + GRI   F                  P  +R +WFPGA +P++LDGSL+GD GFDP G  KPAEYLQ++LDSLDQNLAKN AG+IIGTR E  EVK+TPFQPYTEV G+QR
Sbjct:   10 STFLGTRLADPAPQSGRIVARFGFGGGKKAAAKKAARPSAPTTDRPLWFPGAVAPDYLDGSLVGDYGFDPFGLGKPAEYLQFELDSLDQNLAKNNAGEIIGTRFETGEVKSTPFQPYTEVFGLQR 134

[Close]

BLAST of FE670849 vs. TrEMBL
Match: B9HHN0_POPTR (Light-harvesting complex II protein Lhcb8 OS=Populus trichocarpa GN=Lhcb8 PE=4 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 6.840e-34
Identity = 71/126 (56.35%), Postives = 84/126 (66.67%), Query Frame = 2

Query:   41 SHFFGTRLSKPSSKIGRIRCFFNLXXXXXXXXXXXXXXRQPEGE-RLVWFPGASSPEWLDGSLIGDRGFDPLGFAKPAEYLQYDLDSLDQNLAKNLAGDIIGTRIEVAEVKATPFQPYTEVCGIQR 415
            S+F GTR        G+I+  F                   + E RLVWFPGAS PEWLDG+++GDRGFDP    KPAEYLQ+DLDSLDQNLAKNLAGD+IG R++  EVK TPFQPY+EV G+QR
Sbjct:   10 SYFSGTRTQYTKQNPGKIQALFGFGTKKSPPPPPPKKSSPKQFEDRLVWFPGASPPEWLDGTMVGDRGFDPFALGKPAEYLQFDLDSLDQNLAKNLAGDVIGVRVDATEVKPTPFQPYSEVFGLQR 135

[Close]

BLAST of FE670849 vs. TrEMBL
Match: A5C288_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_010727 PE=4 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 1.524e-33
Identity = 72/125 (57.60%), Postives = 83/125 (66.40%), Query Frame = 2

Query:   41 SHFFGTRLSKPSSKIGRIRCFFNLXXXXXXXXXXXXXXRQPEGERLVWFPGASSPEWLDGSLIGDRGFDPLGFAKPAEYLQYDLDSLDQNLAKNLAGDIIGTRIEVAEVKATPFQPYTEVCGIQR 415
            S F GTRL    S  GR++  F                     +R +WFPGA +PEWLDG+L+GD GFDP G  KPAEYLQYD DSLDQNLAKN+AGD+IGTR E  EVK+TPFQPYTEV G+QR
Sbjct:   13 SSFMGTRLPDVHSNTGRVQARFGFGRKKAPAKKAAKRV----SDRPLWFPGAVAPEWLDGTLVGDYGFDPFGLGKPAEYLQYDYDSLDQNLAKNIAGDVIGTRFEGGEVKSTPFQPYTEVFGLQR 133

[Close]

BLAST of FE670849 vs. TAIR peptide
Match: AT2G40100.2 (| Symbols: LHCB4.3 | light harvesting complex photosystem II | chr2:16745884-16746545 FORWARD LENGTH=185)

HSP 1 Score: 150.984 bits (380), Expect = 2.134e-37
Identity = 75/127 (59.06%), Postives = 85/127 (66.93%), Query Frame = 2

Query:   41 SHFFGTRLSKPSSKIGRIRCFFNLXXXXXXXXXXXXXXRQ--PEGERLVWFPGASSPEWLDGSLIGDRGFDPLGFAKPAEYLQYDLDSLDQNLAKNLAGDIIGTRIEVAEVKATPFQPYTEVCGIQR 415
            S  FG R+  P    GR++  F                RQ   +G+RLVWFPGA+ PEWLDGS+IGDRGFDP G  KPAEYLQYD D LDQNLAKN+AGDIIG   E +E+K TPFQPYTEV GIQR
Sbjct:   10 SGIFGIRIQDPRPGTGRVQARFGFSFGKKKPAPPPKKSRQVQDDGDRLVWFPGANPPEWLDGSMIGDRGFDPFGLGKPAEYLQYDFDGLDQNLAKNVAGDIIGIIQESSEIKPTPFQPYTEVFGIQR 136

[Close]

BLAST of FE670849 vs. TAIR peptide
Match: AT2G40100.1 (| Symbols: LHCB4.3 | light harvesting complex photosystem II | chr2:16745884-16747190 FORWARD LENGTH=276)

HSP 1 Score: 150.984 bits (380), Expect = 2.134e-37
Identity = 75/127 (59.06%), Postives = 85/127 (66.93%), Query Frame = 2

Query:   41 SHFFGTRLSKPSSKIGRIRCFFNLXXXXXXXXXXXXXXRQ--PEGERLVWFPGASSPEWLDGSLIGDRGFDPLGFAKPAEYLQYDLDSLDQNLAKNLAGDIIGTRIEVAEVKATPFQPYTEVCGIQR 415
            S  FG R+  P    GR++  F                RQ   +G+RLVWFPGA+ PEWLDGS+IGDRGFDP G  KPAEYLQYD D LDQNLAKN+AGDIIG   E +E+K TPFQPYTEV GIQR
Sbjct:   10 SGIFGIRIQDPRPGTGRVQARFGFSFGKKKPAPPPKKSRQVQDDGDRLVWFPGANPPEWLDGSMIGDRGFDPFGLGKPAEYLQYDFDGLDQNLAKNVAGDIIGIIQESSEIKPTPFQPYTEVFGIQR 136

[Close]

BLAST of FE670849 vs. TAIR peptide
Match: AT5G01530.1 (| Symbols: LHCB4.1 | light harvesting complex photosystem II | chr5:209084-210243 FORWARD LENGTH=290)

HSP 1 Score: 138.658 bits (348), Expect = 1.096e-33
Identity = 61/82 (74.39%), Postives = 72/82 (87.80%), Query Frame = 2

Query:  170 ERLVWFPGASSPEWLDGSLIGDRGFDPLGFAKPAEYLQYDLDSLDQNLAKNLAGDIIGTRIEVAEVKATPFQPYTEVCGIQR 415
            +R +W+PGA SP+WLDGSL+GD GFDP G  KPAEYLQ+D+DSLDQNLAKNLAGD+IGTR E A+ K+TPFQPY+EV GIQR
Sbjct:   54 DRPLWYPGAISPDWLDGSLVGDYGFDPFGLGKPAEYLQFDIDSLDQNLAKNLAGDVIGTRTEAADAKSTPFQPYSEVFGIQR 135

[Close]

BLAST of FE670849 vs. TAIR peptide
Match: AT3G08940.2 (| Symbols: LHCB4.2 | light harvesting complex photosystem II | chr3:2717717-2718665 FORWARD LENGTH=287)

HSP 1 Score: 132.109 bits (331), Expect = 1.026e-31
Identity = 59/82 (71.95%), Postives = 70/82 (85.37%), Query Frame = 2

Query:  170 ERLVWFPGASSPEWLDGSLIGDRGFDPLGFAKPAEYLQYDLDSLDQNLAKNLAGDIIGTRIEVAEVKATPFQPYTEVCGIQR 415
            +R +WFPGA SPE+LDGSL+GD GFDP G  KPAEYLQ+DLDSLDQNLAKNL G++IGTR E  + K+TPFQPY+EV G+QR
Sbjct:   51 DRPLWFPGAKSPEYLDGSLVGDYGFDPFGLGKPAEYLQFDLDSLDQNLAKNLYGEVIGTRTEAVDPKSTPFQPYSEVFGLQR 132

[Close]

BLAST of FE670849 vs. TAIR peptide
Match: AT3G08940.1 (| Symbols: LHCB4.2 | light harvesting complex photosystem II | chr3:2717717-2718400 FORWARD LENGTH=227)

HSP 1 Score: 132.109 bits (331), Expect = 1.026e-31
Identity = 59/82 (71.95%), Postives = 70/82 (85.37%), Query Frame = 2

Query:  170 ERLVWFPGASSPEWLDGSLIGDRGFDPLGFAKPAEYLQYDLDSLDQNLAKNLAGDIIGTRIEVAEVKATPFQPYTEVCGIQR 415
            +R +WFPGA SPE+LDGSL+GD GFDP G  KPAEYLQ+DLDSLDQNLAKNL G++IGTR E  + K+TPFQPY+EV G+QR
Sbjct:   51 DRPLWFPGAKSPEYLDGSLVGDYGFDPFGLGKPAEYLQFDLDSLDQNLAKNLYGEVIGTRTEAVDPKSTPFQPYSEVFGLQR 132

[Close]

BLAST of FE670849 vs. TAIR peptide
Match: AT3G61470.1 (| Symbols: LHCA2 | photosystem I light harvesting complex gene 2 | chr3:22745736-22747032 FORWARD LENGTH=257)

HSP 1 Score: 56.6102 bits (135), Expect = 5.478e-9
Identity = 22/43 (51.16%), Postives = 33/43 (76.74%), Query Frame = 2

Query:  170 ERLVWFPGASSPEWLDGSLIGDRGFDPLGFAKPAEYLQYDLDS 298
            +R +WFPG++ PEWLDGSL GD GFDPLG +   + L++++ +
Sbjct:   51 DRPIWFPGSTPPEWLDGSLPGDFGFDPLGLSSDPDSLKWNVQA 93

[Close]

BLAST of FE670849 vs. TAIR peptide
Match: AT1G19150.1 (| Symbols: LHCA6, LHCA2*1 | photosystem I light harvesting complex gene 6 | chr1:6612806-6613799 FORWARD LENGTH=270)

HSP 1 Score: 55.4546 bits (132), Expect = 1.220e-8
Identity = 23/39 (58.97%), Postives = 29/39 (74.36%), Query Frame = 2

Query:  170 ERLVWFPGASSPEWLDGSLIGDRGFDPLGFAKPAEYLQY 286
            +R +WFPG+S PEWLDGSL GD GFDPLG     + L++
Sbjct:   64 DRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPDTLKW 102

[Close]

BLAST of FE670849 vs. TAIR peptide
Match: AT3G47470.1 (| Symbols: LHCA4, CAB4 | light-harvesting chlorophyll-protein complex I subunit A4 | chr3:17493622-17494773 REVERSE LENGTH=251)

HSP 1 Score: 49.6766 bits (117), Expect = 6.697e-7
Identity = 21/41 (51.22%), Postives = 29/41 (70.73%), Query Frame = 2

Query:  164 EGERLVWFPGASSPEWLDGSLIGDRGFDPLGFAKPAEYLQY 286
            E ++  W PG +SP++L GSL GD GFDPLG A+  E L++
Sbjct:   51 EAKKGEWLPGLASPDYLTGSLAGDNGFDPLGLAEDPENLKW 91

The following BLAST results are available for this feature:

BLAST of FE670849 vs. SwissProt
BLAST of FE670849 vs. TrEMBL
BLAST of FE670849 vs. TAIR peptide

BLAST of FE670849 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 6


Match Name	E-value	Identity	Description
CB4C_ARATH	1.788e-36	59.06	Chlorophyll a-b binding protein CP29.3, chloroplas...	[more]
CB4A_ARATH	9.181e-33	74.39	Chlorophyll a-b binding protein CP29.1, chloroplas...	[more]
CB4B_ARATH	8.594e-31	71.95	Chlorophyll a-b binding protein CP29.2, chloroplas...	[more]
CB29_CHLRE	6.610e-15	46.32	Chlorophyll a-b binding protein CP29 OS=Chlamydomo...	[more]
CB12_PETHY	7.827e-8	57.50	Chlorophyll a-b binding protein, chloroplastic OS=...	[more]
CB12_SOLLC	1.335e-7	57.50	Chlorophyll a-b binding protein 7, chloroplastic O...	[more]

BLAST of FE670849 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
B9SLN2_RICCO	5.596e-36	56.92	Chlorophyll A/B binding protein, putative OS=Ricin...	[more]
B7FIZ5_MEDTR	7.308e-36	60.80	Putative uncharacterized protein OS=Medicago trunc...	[more]
D7LEF5_ARALY	8.080e-35	58.27	LHCB4.3 OS=Arabidopsis lyrata subsp. lyrata GN=ARA...	[more]
B7SB30_BAMOL	8.080e-35	60.80	LHCB4 OS=Bambusa oldhamii PE=2 SV=1	[more]
B9SQ36_RICCO	2.351e-34	57.60	Chlorophyll A/B binding protein, putative OS=Ricin...	[more]
Q6Z411_ORYSJ	5.237e-34	57.60	Chlorophyll a/b-binding protein OS=Oryza sativa su...	[more]
O65217_ORYSA	5.237e-34	57.60	Chlorophyll a/b-binding protein OS=Oryza sativa GN...	[more]
A2YML1_ORYSI	5.237e-34	57.60	Putative uncharacterized protein OS=Oryza sativa s...	[more]
B9HHN0_POPTR	6.840e-34	56.35	Light-harvesting complex II protein Lhcb8 OS=Popul...	[more]
A5C288_VITVI	1.524e-33	57.60	Putative uncharacterized protein OS=Vitis vinifera...	[more]

BLAST of FE670849 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 8


Match Name	E-value	Identity	Description
AT2G40100.2	2.134e-37	59.06	\| Symbols: LHCB4.3 \| light harvesting complex phot...	[more]
AT2G40100.1	2.134e-37	59.06	\| Symbols: LHCB4.3 \| light harvesting complex phot...	[more]
AT5G01530.1	1.096e-33	74.39	\| Symbols: LHCB4.1 \| light harvesting complex phot...	[more]
AT3G08940.2	1.026e-31	71.95	\| Symbols: LHCB4.2 \| light harvesting complex phot...	[more]
AT3G08940.1	1.026e-31	71.95	\| Symbols: LHCB4.2 \| light harvesting complex phot...	[more]
AT3G61470.1	5.478e-9	51.16	\| Symbols: LHCA2 \| photosystem I light harvesting ...	[more]
AT1G19150.1	1.220e-8	58.97	\| Symbols: LHCA6, LHCA2*1 \| photosystem I light ha...	[more]
AT3G47470.1	6.697e-7	51.22	\| Symbols: LHCA4, CAB4 \| light-harvesting chloroph...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001344	Chlorophyll A-B binding protein, plant	PANTHER	PTHR21649	CHLOROPHYLL A/B BINDING PROTEIN	coord: 4..94 score: 1.6
IPR022796	Chlorophyll A-B binding protein	PFAM	PF00504	Chloroa_b-bind	coord: 68..96 score: 3
None	No IPR available	GENE3D	1.10.3460.10	no description	coord: 60..94 score: 1.3
None	No IPR available	SEG	seg	seg	coord: 5..13 score: NAcoord: 38..51 score
None	No IPR available	SUPERFAMILY	103511	Chlorophyll a-b binding protein	coord: 49..95 score: 2.1
None	No IPR available	SEG	seg	seg	coord: 77..90 score: NAcoord: 115..123 score
None	No IPR available	SEG	seg	seg	coord: 57..75 score

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>FE670849 ID=FE670849; Name=FE670849; organism=Cicer arietinum; type=EST; length=415bp
ATTCCAAAACATGGCCACCACCGCAACAGCCGCTGCCACGTCACACTTTT
TCGGCACCCGTCTCAGTAAACCAAGTTCAAAGATTGGAAGAATCCGCTGT
TTTTTCAATCTGAAACCGAAAAAAGCAGCAGAGAAGAAAAAGGAAGTGAA
ACCTCGACAACCGGAAGGTGAGCGGCTAGTATGGTTTCCAGGTGCGTCAT
CACCGGAATGGCTGGACGGTAGCTTGATAGGTGACCGTGGATTTGATCCA
TTGGGATTCGCGAAACCAGCGGAGTATTTACAGTATGACCTTGACTCGCT
TGACCAGAATCTGGCGAAGAACCTTGCTGGAGATATTATTGGAACTAGAA
TCGAAGTTGCGGAGGTAAAAGCGACGCCGTTTCAGCCTTATACGGAAGTG
TGTGGGATTCAGAGG

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane

Vocabulary: **INTERPRO**
Term	Definition
IPR001344	Chloro_AB-bd_pln
IPR022796	Chloroa_b-bind

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