FE672472

EST Overview


Name	FE672472
Unique Name	FE672472
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	403

Libraries


Library Name	Type
LIBEST_022820 Drought-stressed chickpea leave library	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

[Close]

BLAST of FE672472 vs. SwissProt
Match: LHP1_ARATH (Chromo domain-containing protein LHP1 OS=Arabidopsis thaliana GN=LHP1 PE=1 SV=2)

HSP 1 Score: 124.02 bits (310), Expect = 2.378e-28
Identity = 59/87 (67.82%), Postives = 69/87 (79.31%), Query Frame = 1

Query:  145 GSDSELQNENENETPSTPKLDDGFYEIETIRRKRLRKGEVQYLIKWRGWPETANTWEPLQDLQSVRDLIHAFEDSLKSGK-HRKRKR 402
            G + + + E E      PKLD+GFYEIE IRRKR+RKG+VQYLIKWRGWPETANTWEPL++LQS+ D+I AFE SLK GK  RKRKR
Sbjct:   84 GDEEDEEGEGEGGQEERPKLDEGFYEIEAIRRKRVRKGKVQYLIKWRGWPETANTWEPLENLQSIADVIDAFEGSLKPGKPGRKRKR 170

[Close]

BLAST of FE672472 vs. SwissProt
Match: LHP1_SOLLC (Chromo domain protein LHP1 OS=Solanum lycopersicum GN=LHP1 PE=1 SV=2)

HSP 1 Score: 106.301 bits (264), Expect = 5.131e-23
Identity = 48/69 (69.57%), Postives = 58/69 (84.06%), Query Frame = 1

Query:  196 PKLDDGFYEIETIRRKRLRKGEVQYLIKWRGWPETANTWEPLQDLQSVRDLIHAFEDSLKSGKHRKRKR 402
            PKL +GFYEIET+RR+R  KG+V YLIKWRGWPE+ANTWEP  +L S  D+I A+E+SLKSGK R+RKR
Sbjct:   86 PKLAEGFYEIETVRRRRTVKGKVYYLIKWRGWPESANTWEPETNLSSCTDIIDAYEESLKSGKLRRRKR 154

[Close]

BLAST of FE672472 vs. SwissProt
Match: LHP1_ORYSJ (Probable chromo domain-containing protein LHP1 OS=Oryza sativa subsp. japonica GN=LHP1 PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 9.676e-22
Identity = 47/73 (64.38%), Postives = 60/73 (82.19%), Query Frame = 1

Query:  190 STPKLDDGFYEIETIRRKRLRKGEVQYLIKWRGWPETANTWEPLQDLQSVRDLIHAFEDSLKS---GKHRKRK 399
            S PKL +G+YEIE IRR+RLRKG++QYL+KWRGWPE+ANTWEPL++L +  D+I AFE  L+S   G+ RKRK
Sbjct:   98 SPPKLAEGYYEIEDIRRRRLRKGKLQYLVKWRGWPESANTWEPLENLSACSDIIDAFEMRLQSPRPGRKRKRK 170

[Close]

BLAST of FE672472 vs. SwissProt
Match: HP1_DROME (Heterochromatin protein 1 OS=Drosophila melanogaster GN=Su(var)205 PE=1 SV=2)

HSP 1 Score: 61.2326 bits (147), Expect = 1.893e-9
Identity = 29/73 (39.73%), Postives = 46/73 (63.01%), Query Frame = 1

Query:  157 ELQNENENETPSTPKLDDGFYEIETIRRKRLRKGEVQYLIKWRGWPETANTWEPLQDLQSVRDLIHAFEDSLK 375
            ++ N   +   S  + ++  Y +E I  +R+RKG+V+Y +KW+G+PET NTWEP  +L   +DLI  +E S K
Sbjct:    4 KIDNPESSAKVSDAEEEEEEYAVEKIIDRRVRKGKVEYYLKWKGYPETENTWEPENNL-DCQDLIQQYEASRK 75

[Close]

BLAST of FE672472 vs. SwissProt
Match: CBX7_RAT (Chromobox protein homolog 7 OS=Rattus norvegicus GN=Cbx7 PE=2 SV=1)

HSP 1 Score: 61.2326 bits (147), Expect = 1.893e-9
Identity = 27/63 (42.86%), Postives = 45/63 (71.43%), Query Frame = 1

Query:  217 YEIETIRRKRLRKGEVQYLIKWRGWPETANTWEPLQDLQSVRDLIHAFEDSLKSGK---HRKR 396
            + +E+IR+KR+RKG+V+YL+KW+GWP   +TWEP + +   R L+ A+E+  +  +   +RKR
Sbjct:   11 FAVESIRKKRVRKGKVEYLVKWKGWPPKYSTWEPEEHILDPR-LVMAYEEKEEKDRASGYRKR 72

[Close]

BLAST of FE672472 vs. SwissProt
Match: CBX7_MOUSE (Chromobox protein homolog 7 OS=Mus musculus GN=Cbx7 PE=1 SV=1)

HSP 1 Score: 60.8474 bits (146), Expect = 2.472e-9
Identity = 27/63 (42.86%), Postives = 45/63 (71.43%), Query Frame = 1

Query:  217 YEIETIRRKRLRKGEVQYLIKWRGWPETANTWEPLQDLQSVRDLIHAFEDSL---KSGKHRKR 396
            + +E+IR+KR+RKG+V+YL+KW+GWP   +TWEP + +   R L+ A+E+     ++  +RKR
Sbjct:   11 FAVESIRKKRVRKGKVEYLVKWKGWPPKYSTWEPEEHILDPR-LVMAYEEKEERDRASGYRKR 72

[Close]

BLAST of FE672472 vs. SwissProt
Match: CBX7_HUMAN (Chromobox protein homolog 7 OS=Homo sapiens GN=CBX7 PE=1 SV=1)

HSP 1 Score: 60.8474 bits (146), Expect = 2.472e-9
Identity = 27/63 (42.86%), Postives = 45/63 (71.43%), Query Frame = 1

Query:  217 YEIETIRRKRLRKGEVQYLIKWRGWPETANTWEPLQDLQSVRDLIHAFEDSL---KSGKHRKR 396
            + +E+IR+KR+RKG+V+YL+KW+GWP   +TWEP + +   R L+ A+E+     ++  +RKR
Sbjct:   11 FAVESIRKKRVRKGKVEYLVKWKGWPPKYSTWEPEEHILDPR-LVMAYEEKEERDRASGYRKR 72

[Close]

BLAST of FE672472 vs. SwissProt
Match: CBX4_MOUSE (E3 SUMO-protein ligase CBX4 OS=Mus musculus GN=Cbx4 PE=1 SV=2)

HSP 1 Score: 60.4622 bits (145), Expect = 3.229e-9
Identity = 26/57 (45.61%), Postives = 40/57 (70.18%), Query Frame = 1

Query:  196 PKLDDGFYEIETIRRKRLRKGEVQYLIKWRGWPETANTWEPLQDLQSVRDLIHAFED 366
            P + +  + +E+I +KR+RKG V+YL+KWRGW    NTWEP +++   R LI AF++
Sbjct:    4 PAVGEHVFAVESIEKKRIRKGRVEYLVKWRGWSPKYNTWEPEENILDPRLLI-AFQN 59

[Close]

BLAST of FE672472 vs. SwissProt
Match: CBX4_HUMAN (E3 SUMO-protein ligase CBX4 OS=Homo sapiens GN=CBX4 PE=1 SV=3)

HSP 1 Score: 60.4622 bits (145), Expect = 3.229e-9
Identity = 26/57 (45.61%), Postives = 40/57 (70.18%), Query Frame = 1

Query:  196 PKLDDGFYEIETIRRKRLRKGEVQYLIKWRGWPETANTWEPLQDLQSVRDLIHAFED 366
            P + +  + +E+I +KR+RKG V+YL+KWRGW    NTWEP +++   R LI AF++
Sbjct:    4 PAVGEHVFAVESIEKKRIRKGRVEYLVKWRGWSPKYNTWEPEENILDPRLLI-AFQN 59

[Close]

BLAST of FE672472 vs. SwissProt
Match: PC_DROME (Polycomb group protein Pc OS=Drosophila melanogaster GN=Pc PE=1 SV=1)

HSP 1 Score: 58.151 bits (139), Expect = 1.602e-8
Identity = 32/83 (38.55%), Postives = 46/83 (55.42%), Query Frame = 1

Query:  130 TKRSSGSDSELQNENENETPSTPKLDDGFYEIETIRRKRLRKGEVQYLIKWRGWPETANTWEPLQDLQSVRDLIHAFEDSLKS 378
            T R  GS  +L  +N  + P      D  Y  E I +KR++KG V+Y +KW+GW +  NTWEP  ++   R LI  +E + KS
Sbjct:    2 TGRGKGSKGKLGRDNATDDPV-----DLVYAAEKIIQKRVKKGVVEYRVKWKGWNQRYNTWEPEVNILD-RRLIDIYEQTNKS 78

[Close]

BLAST of FE672472 vs. TrEMBL
Match: C6TAJ7_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 5.165e-29
Identity = 65/83 (78.31%), Postives = 70/83 (84.34%), Query Frame = 1

Query:  163 QNENENET--PSTPKLDDGFYEIETIRRKRLRKGEVQYLIKWRGWPETANTWEPLQDLQSVRDLIHAFEDS-LKSGKHRKRKR 402
            +NEN  ET  P  P LDDGFYEIETIRRKRLRKG++QYLIKW GWPETANTWEPL +LQSV DLI AFE+S LKSGKH KRKR
Sbjct:   43 KNENGEETLVPPNPNLDDGFYEIETIRRKRLRKGQLQYLIKWHGWPETANTWEPLGNLQSVPDLIDAFEESLLKSGKHHKRKR 125

[Close]

BLAST of FE672472 vs. TrEMBL
Match: A7M6G2_MALDO (Terminal flower 2 protein OS=Malus domestica GN=MdLHP1b PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 1.963e-28
Identity = 57/86 (66.28%), Postives = 71/86 (82.56%), Query Frame = 1

Query:  145 GSDSELQNENENETPSTPKLDDGFYEIETIRRKRLRKGEVQYLIKWRGWPETANTWEPLQDLQSVRDLIHAFEDSLKSGKHRKRKR 402
            G D + +   ++E     KLDDGFYEIE IRRKR+RKG++QYLIKWRGWPETANTWEPL +LQS+ D++ AFE+SL++GKHRKRKR
Sbjct:   83 GGDGDGEAGADDENRERNKLDDGFYEIEAIRRKRVRKGQLQYLIKWRGWPETANTWEPLDNLQSIADVVEAFEESLRTGKHRKRKR 168

[Close]

BLAST of FE672472 vs. TrEMBL
Match: A7M6G1_MALDO (Terminal flower 2 protein OS=Malus domestica GN=MdLHP1b PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 1.963e-28
Identity = 57/86 (66.28%), Postives = 71/86 (82.56%), Query Frame = 1

Query:  145 GSDSELQNENENETPSTPKLDDGFYEIETIRRKRLRKGEVQYLIKWRGWPETANTWEPLQDLQSVRDLIHAFEDSLKSGKHRKRKR 402
            G D + +   ++E     KLDDGFYEIE IRRKR+RKG++QYLIKWRGWPETANTWEPL +LQS+ D++ AFE+SL++GKHRKRKR
Sbjct:   83 GGDGDGEAGADDENRERNKLDDGFYEIEAIRRKRVRKGQLQYLIKWRGWPETANTWEPLDNLQSIADVVEAFEESLRTGKHRKRKR 168

[Close]

BLAST of FE672472 vs. TrEMBL
Match: A7M6G6_MALDO (Like heterochromatin protein 1 OS=Malus domestica GN=MdLHP1a PE=4 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 7.458e-28
Identity = 56/86 (65.12%), Postives = 70/86 (81.40%), Query Frame = 1

Query:  145 GSDSELQNENENETPSTPKLDDGFYEIETIRRKRLRKGEVQYLIKWRGWPETANTWEPLQDLQSVRDLIHAFEDSLKSGKHRKRKR 402
            G + +     ++E     KLDDGFYEIE IRRKR+RKG++QYLIKWRGWPETANTWEPL +LQS+ D++ AFE+SL++GKHRKRKR
Sbjct:   84 GGEGDGAAGGDDENRERNKLDDGFYEIEAIRRKRVRKGQLQYLIKWRGWPETANTWEPLDNLQSIADVVEAFEESLRTGKHRKRKR 169

[Close]

BLAST of FE672472 vs. TrEMBL
Match: A7M6G0_MALDO (Terminal flower 2 protein OS=Malus domestica GN=MdLHP1a PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 7.458e-28
Identity = 56/86 (65.12%), Postives = 70/86 (81.40%), Query Frame = 1

Query:  145 GSDSELQNENENETPSTPKLDDGFYEIETIRRKRLRKGEVQYLIKWRGWPETANTWEPLQDLQSVRDLIHAFEDSLKSGKHRKRKR 402
            G + +     ++E     KLDDGFYEIE IRRKR+RKG++QYLIKWRGWPETANTWEPL +LQS+ D++ AFE+SL++GKHRKRKR
Sbjct:   84 GGEGDGAAGGDDENRERNKLDDGFYEIEAIRRKRVRKGQLQYLIKWRGWPETANTWEPLDNLQSIADVVEAFEESLRTGKHRKRKR 169

[Close]

BLAST of FE672472 vs. TrEMBL
Match: A7M6F9_MALDO (Like heterochromatin protein 1 OS=Malus domestica GN=MdLHP1a PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 7.458e-28
Identity = 56/86 (65.12%), Postives = 70/86 (81.40%), Query Frame = 1

Query:  145 GSDSELQNENENETPSTPKLDDGFYEIETIRRKRLRKGEVQYLIKWRGWPETANTWEPLQDLQSVRDLIHAFEDSLKSGKHRKRKR 402
            G + +     ++E     KLDDGFYEIE IRRKR+RKG++QYLIKWRGWPETANTWEPL +LQS+ D++ AFE+SL++GKHRKRKR
Sbjct:   84 GGEGDGAAGGDDENRERNKLDDGFYEIEAIRRKRVRKGQLQYLIKWRGWPETANTWEPLDNLQSIADVVEAFEESLRTGKHRKRKR 169

[Close]

BLAST of FE672472 vs. TrEMBL
Match: Q058P7_ARATH (At5g17690 OS=Arabidopsis thaliana PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 4.834e-27
Identity = 59/87 (67.82%), Postives = 69/87 (79.31%), Query Frame = 1

Query:  145 GSDSELQNENENETPSTPKLDDGFYEIETIRRKRLRKGEVQYLIKWRGWPETANTWEPLQDLQSVRDLIHAFEDSLKSGK-HRKRKR 402
            G + + + E E      PKLD+GFYEIE IRRKR+RKG+VQYLIKWRGWPETANTWEPL++LQS+ D+I AFE SLK GK  RKRKR
Sbjct:   84 GDEEDEEGEGEGGQEERPKLDEGFYEIEAIRRKRVRKGKVQYLIKWRGWPETANTWEPLENLQSIADVIDAFEGSLKPGKPGRKRKR 170

[Close]

BLAST of FE672472 vs. TrEMBL
Match: D7LX33_ARALY (Predicted protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_661613 PE=4 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 1.837e-26
Identity = 58/87 (66.67%), Postives = 68/87 (78.16%), Query Frame = 1

Query:  145 GSDSELQNENENETPSTPKLDDGFYEIETIRRKRLRKGEVQYLIKWRGWPETANTWEPLQDLQSVRDLIHAFEDSLKSGK-HRKRKR 402
            G + + + E        PKLD+GFYEIE IRRKR+RKG+VQYLIKWRGWPETANTWEPL++LQS+ D+I AFE SLK GK  RKRKR
Sbjct:   77 GDEEDEEGEGRGGKEERPKLDEGFYEIEAIRRKRVRKGKVQYLIKWRGWPETANTWEPLENLQSIADVIDAFEGSLKPGKPGRKRKR 163

[Close]

BLAST of FE672472 vs. TrEMBL
Match: B9SDA2_RICCO (Heterochromatin protein, putative OS=Ricinus communis GN=RCOM_1515380 PE=4 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 5.910e-25
Identity = 57/108 (52.78%), Postives = 78/108 (72.22%), Query Frame = 1

Query:  112 SNEMRKTKRSSGSDSELQNENENETPST----------PKLDDGFYEIETIRRKRLRKGEVQYLIKWRGWPETANTWEPLQDLQSVRDLIHAFEDSLKSGK-HRKRKR 402
            +N + + +    +D+E + ++++E              PKLD+GF+EIE IRRKR+RKG++QYLIKWRGWPE ANTWEPL++LQS  D+I AFE+SL+SGK  RKRKR
Sbjct:   74 NNNVEEDEDDDDNDNEEEEDDDDEEEEKKGEGGVEEERPKLDEGFFEIEAIRRKRVRKGQLQYLIKWRGWPEAANTWEPLENLQSCSDVIDAFEESLRSGKSSRKRKR 181

[Close]

BLAST of FE672472 vs. TrEMBL
Match: B9IPZ2_POPTR (Chromo domain protein OS=Populus trichocarpa GN=CRD901 PE=4 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 2.246e-24
Identity = 57/86 (66.28%), Postives = 70/86 (81.40%), Query Frame = 1

Query:  151 DSELQNENENE-TPSTPKLDDGFYEIETIRRKRLRKGEVQYLIKWRGWPETANTWEPLQDLQSVRDLIHAFEDSLKSGK-HRKRKR 402
            DS+ + E +N       KLD+GF+EIE IRRKR+RKG++QYLIKWRGWPETANTWEPL++LQS  D+I AFE+SL+SGK  RKRKR
Sbjct:   71 DSKGEQERDNLFDEERTKLDEGFFEIEAIRRKRVRKGQLQYLIKWRGWPETANTWEPLENLQSCADVIDAFEESLQSGKSFRKRKR 156

[Close]

BLAST of FE672472 vs. TAIR peptide
Match: AT5G17690.1 (| Symbols: TFL2, LHP1 | like heterochromatin protein (LHP1) | chr5:5827504-5829537 REVERSE LENGTH=445)

HSP 1 Score: 124.02 bits (310), Expect = 2.628e-29
Identity = 59/87 (67.82%), Postives = 69/87 (79.31%), Query Frame = 1

Query:  145 GSDSELQNENENETPSTPKLDDGFYEIETIRRKRLRKGEVQYLIKWRGWPETANTWEPLQDLQSVRDLIHAFEDSLKSGK-HRKRKR 402
            G + + + E E      PKLD+GFYEIE IRRKR+RKG+VQYLIKWRGWPETANTWEPL++LQS+ D+I AFE SLK GK  RKRKR
Sbjct:   84 GDEEDEEGEGEGGQEERPKLDEGFYEIEAIRRKRVRKGKVQYLIKWRGWPETANTWEPLENLQSIADVIDAFEGSLKPGKPGRKRKR 170

The following BLAST results are available for this feature:

BLAST of FE672472 vs. SwissProt
BLAST of FE672472 vs. TrEMBL
BLAST of FE672472 vs. TAIR peptide

BLAST of FE672472 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
LHP1_ARATH	2.378e-28	67.82	Chromo domain-containing protein LHP1 OS=Arabidops...	[more]
LHP1_SOLLC	5.131e-23	69.57	Chromo domain protein LHP1 OS=Solanum lycopersicum...	[more]
LHP1_ORYSJ	9.676e-22	64.38	Probable chromo domain-containing protein LHP1 OS=...	[more]
HP1_DROME	1.893e-9	39.73	Heterochromatin protein 1 OS=Drosophila melanogast...	[more]
CBX7_RAT	1.893e-9	42.86	Chromobox protein homolog 7 OS=Rattus norvegicus G...	[more]
CBX7_MOUSE	2.472e-9	42.86	Chromobox protein homolog 7 OS=Mus musculus GN=Cbx...	[more]
CBX7_HUMAN	2.472e-9	42.86	Chromobox protein homolog 7 OS=Homo sapiens GN=CBX...	[more]
CBX4_MOUSE	3.229e-9	45.61	E3 SUMO-protein ligase CBX4 OS=Mus musculus GN=Cbx...	[more]
CBX4_HUMAN	3.229e-9	45.61	E3 SUMO-protein ligase CBX4 OS=Homo sapiens GN=CBX...	[more]
PC_DROME	1.602e-8	38.55	Polycomb group protein Pc OS=Drosophila melanogast...	[more]

BLAST of FE672472 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
C6TAJ7_SOYBN	5.165e-29	78.31	Putative uncharacterized protein OS=Glycine max PE...	[more]
A7M6G2_MALDO	1.963e-28	66.28	Terminal flower 2 protein OS=Malus domestica GN=Md...	[more]
A7M6G1_MALDO	1.963e-28	66.28	Terminal flower 2 protein OS=Malus domestica GN=Md...	[more]
A7M6G6_MALDO	7.458e-28	65.12	Like heterochromatin protein 1 OS=Malus domestica ...	[more]
A7M6G0_MALDO	7.458e-28	65.12	Terminal flower 2 protein OS=Malus domestica GN=Md...	[more]
A7M6F9_MALDO	7.458e-28	65.12	Like heterochromatin protein 1 OS=Malus domestica ...	[more]
Q058P7_ARATH	4.834e-27	67.82	At5g17690 OS=Arabidopsis thaliana PE=2 SV=1	[more]
D7LX33_ARALY	1.837e-26	66.67	Predicted protein OS=Arabidopsis lyrata subsp. lyr...	[more]
B9SDA2_RICCO	5.910e-25	52.78	Heterochromatin protein, putative OS=Ricinus commu...	[more]
B9IPZ2_POPTR	2.246e-24	66.28	Chromo domain protein OS=Populus trichocarpa GN=CR...	[more]

BLAST of FE672472 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 1


Match Name	E-value	Identity	Description
AT5G17690.1	2.628e-29	67.82	\| Symbols: TFL2, LHP1 \| like heterochromatin prote...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000953	Chromo domain	PFAM	PF00385	Chromo	coord: 39..88 score: 2.9
IPR000953	Chromo domain	SMART	SM00298	no description	coord: 38..91 score: 4
IPR000953	Chromo domain	PROSITE	PS00598	CHROMO_1	coord: 56..76 score
IPR000953	Chromo domain	PROFILE	PS50013	CHROMO_2	coord: 39..98 score: 16
IPR016197	Chromo domain-like	SUPERFAMILY	54160	Chromo domain-like	coord: 9..99 score: 7.5
IPR017984	Chromo domain subgroup	PRINTS	PR00504	CHROMODOMAIN	coord: 36..44 score: 2.5e-05coord: 49..63 score: 2.5e-05coord: 64..76 score: 2.5
None	No IPR available	GENE3D	2.40.50.40	no description	coord: 25..91 score: 5.4
None	No IPR available	PANTHER	PTHR22812	CHROMOBOX PROTEIN	coord: 30..100 score: 1.5
None	No IPR available	PANTHER	PTHR22812:SF2	CHROMOBOX POLYCOMB - RELATED	coord: 30..100 score: 1.5
None	No IPR available	SEG	seg	seg	coord: 12..29 score
None	No IPR available	SEG	seg	seg	coord: 12..17 score: NAcoord: 25..36 score

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>FE672472 ID=FE672472; Name=FE672472; organism=Cicer arietinum; type=EST; length=403bp
TGCAGGAATTCGAATTGACGAAGTCTCTGTTGTGTGTCTAGTAAAAAGAA
GATCGGTTGAGTTGAGTTGGGTTGGTGGTGGGAGCAATAGGTTCGCGAGT
AGGAAGTAATAAGTAATGAAATGAGAAAGACGAAGAGGAGTAGCGGTTCA
GATTCAGAATTGCAGAATGAGAATGAGAATGAAACCCCTTCTACTCCCAA
GCTTGATGATGGCTTCTATGAAATCGAAACCATACGCCGTAAGAGGCTCC
GCAAGGGTGAGGTTCAGTACCTGATTAAATGGCGTGGGTGGCCTGAGACT
GCCAATACTTGGGAGCCTCTTCAGGATCTACAGTCTGTACGTGATCTCAT
TCATGCCTTTGAGGATAGCCTCAAATCAGGAAAACATCGCAAGCGCAAAC
GCA

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **Cellular Component**
Term	Definition
GO:0000785	chromatin
GO:0005634	nucleus

Vocabulary: **Molecular Function**
Term	Definition
GO:0003682	chromatin binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006333	chromatin assembly or disassembly

Vocabulary: **INTERPRO**
Term	Definition
IPR023780	Chromo_domain
IPR016197	Chromo-like_dom_sf
IPR017984	Chromo_dom_subgr

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