GR394291

EST Overview
NameGR394291
Unique NameGR394291
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length476
Libraries
Library NameType
LIBEST_024779 ICC1882 Slow drought stressed root cDNA librarycdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
Homology
[Close]
BLAST of GR394291 vs. TrEMBL
Match: C6TE10_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 2.886e-16
Identity = 40/47 (85.11%), Postives = 43/47 (91.49%), Query Frame = 3 
Query:    3 NVQQCFEELVLKTLDTPSLLAEGSKGVKNNIFKDKPPQSDASTGGCC 143
            NVQQCFEELVLK LDTPSL+AEGSKGVK NIFK++PPQSDAST  CC
Sbjct:  163 NVQQCFEELVLKILDTPSLIAEGSKGVKKNIFKERPPQSDASTSSCC 209
[Close]
BLAST of GR394291 vs. TrEMBL
Match: C6T2M4_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 3.769e-16
Identity = 40/47 (85.11%), Postives = 42/47 (89.36%), Query Frame = 3 
Query:    3 NVQQCFEELVLKTLDTPSLLAEGSKGVKNNIFKDKPPQSDASTGGCC 143
            NVQQCFEELVLK LDTPSL+AEGSKGVK NIFKD+PPQSDAS   CC
Sbjct:  163 NVQQCFEELVLKILDTPSLIAEGSKGVKKNIFKDRPPQSDASASSCC 209
[Close]
BLAST of GR394291 vs. TrEMBL
Match: Q40207_LOTJA (RAB1Y (Fragment) OS=Lotus japonicus GN=rab1Y PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 4.923e-16
Identity = 41/47 (87.23%), Postives = 42/47 (89.36%), Query Frame = 3 
Query:    3 NVQQCFEELVLKTLDTPSLLAEGSKGVKNNIFKDKPPQSDASTGGCC 143
            NVQQCFEELVLK LDTPSLLAEGSKGVK NIFKDK PQ+DAST  CC
Sbjct:  161 NVQQCFEELVLKILDTPSLLAEGSKGVKKNIFKDKQPQADASTSSCC 207
[Close]
BLAST of GR394291 vs. TrEMBL
Match: A5ATB8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_027716 PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 3.191e-15
Identity = 38/47 (80.85%), Postives = 42/47 (89.36%), Query Frame = 3 
Query:    3 NVQQCFEELVLKTLDTPSLLAEGSKGVKNNIFKDKPPQSDASTGGCC 143
            NV+QCFEELVLK L+TPSLLAEGS GV+ NIFK KPP+SDAST GCC
Sbjct:  151 NVEQCFEELVLKILETPSLLAEGSSGVRKNIFKQKPPESDASTSGCC 197
[Close]
BLAST of GR394291 vs. TrEMBL
Match: B9HES5_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_832239 PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 9.284e-15
Identity = 39/47 (82.98%), Postives = 40/47 (85.11%), Query Frame = 3 
Query:    3 NVQQCFEELVLKTLDTPSLLAEGSKGVKNNIFKDKPPQSDASTGGCC 143
            NVQQCFEELVLK LDTPSLLAEGSKGVK NIF +K PQ DAST  CC
Sbjct:  163 NVQQCFEELVLKVLDTPSLLAEGSKGVKKNIFNEKRPQPDASTSSCC 209
[Close]
BLAST of GR394291 vs. TrEMBL
Match: B9H489_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_818249 PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.213e-14
Identity = 39/47 (82.98%), Postives = 40/47 (85.11%), Query Frame = 3 
Query:    3 NVQQCFEELVLKTLDTPSLLAEGSKGVKNNIFKDKPPQSDASTGGCC 143
            NVQQCFEELVLK LDTPSLLAEGSKGVK NIF +K PQ DAST  CC
Sbjct:  163 NVQQCFEELVLKILDTPSLLAEGSKGVKKNIFSEKRPQPDASTSSCC 209
[Close]
BLAST of GR394291 vs. TrEMBL
Match: C6SWE3_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.584e-14
Identity = 37/47 (78.72%), Postives = 41/47 (87.23%), Query Frame = 3 
Query:    3 NVQQCFEELVLKTLDTPSLLAEGSKGVKNNIFKDKPPQSDASTGGCC 143
            NV QCF+ELV+K L+TPSLLAEGS GVK NIFK KPPQSDAS+ GCC
Sbjct:  167 NVAQCFDELVMKILETPSLLAEGSSGVKKNIFKQKPPQSDASSSGCC 213
[Close]
BLAST of GR394291 vs. TrEMBL
Match: C6TJB7_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.027e-13
Identity = 36/47 (76.60%), Postives = 40/47 (85.11%), Query Frame = 3 
Query:    3 NVQQCFEELVLKTLDTPSLLAEGSKGVKNNIFKDKPPQSDASTGGCC 143
            NV QCF+ELV+K L+TPSLLAEGS GVK NIFK KPP SDAS+ GCC
Sbjct:  166 NVTQCFDELVMKILETPSLLAEGSSGVKKNIFKQKPPLSDASSSGCC 212
[Close]
BLAST of GR394291 vs. TrEMBL
Match: B7FMN8_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.027e-13
Identity = 40/47 (85.11%), Postives = 40/47 (85.11%), Query Frame = 3 
Query:    3 NVQQCFEELVLKTLDTPSLLAEGSKGVKNNIFKDKPPQSDASTGGCC 143
            NVQ CFEELVLK LDTPSLLAE SKG K NIFKDK PQSDAST GCC
Sbjct:  162 NVQHCFEELVLKILDTPSLLAESSKGNKKNIFKDK-PQSDASTSGCC 207
[Close]
BLAST of GR394291 vs. TrEMBL
Match: C5YB63_SORBI (Putative uncharacterized protein Sb06g034200 OS=Sorghum bicolor GN=Sb06g034200 PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.482e-12
Identity = 33/47 (70.21%), Postives = 38/47 (80.85%), Query Frame = 3 
Query:    3 NVQQCFEELVLKTLDTPSLLAEGSKGVKNNIFKDKPPQSDASTGGCC 143
            NV+QCFEELVLK LDTPSLLA+ S G K NIFK KPP++DA+   CC
Sbjct:  169 NVEQCFEELVLKILDTPSLLADASSGAKKNIFKQKPPEADAAASSCC 215
[Close]
BLAST of GR394291 vs. TAIR peptide
Match: AT1G43890.3 (| Symbols: ATRAB18, ATRABC1, RAB18-1, RABC1, ATRAB-C1, RAB18 | RAB GTPASE HOMOLOG B18 | chr1:16646934-16648395 FORWARD LENGTH=212)

HSP 1 Score: 63.1586 bits (152), Expect = 7.998e-11
Identity = 29/47 (61.70%), Postives = 35/47 (74.47%), Query Frame = 3 
Query:    3 NVQQCFEELVLKTLDTPSLLAEGSKGVKNNIFKDKPPQSDASTGGCC 143
            NV+QCFEELVLK L+TPSL AEGS G K NIFK  P Q+ +++   C
Sbjct:  163 NVEQCFEELVLKILETPSLTAEGSSGGKKNIFKQNPAQTTSTSSSYC 209
[Close]
BLAST of GR394291 vs. TAIR peptide
Match: AT1G43890.2 (| Symbols: ATRAB18, ATRABC1, RAB18-1, RABC1, ATRAB-C1, RAB18 | RAB GTPASE HOMOLOG B18 | chr1:16646934-16648395 FORWARD LENGTH=212)

HSP 1 Score: 63.1586 bits (152), Expect = 7.998e-11
Identity = 29/47 (61.70%), Postives = 35/47 (74.47%), Query Frame = 3 
Query:    3 NVQQCFEELVLKTLDTPSLLAEGSKGVKNNIFKDKPPQSDASTGGCC 143
            NV+QCFEELVLK L+TPSL AEGS G K NIFK  P Q+ +++   C
Sbjct:  163 NVEQCFEELVLKILETPSLTAEGSSGGKKNIFKQNPAQTTSTSSSYC 209
[Close]
BLAST of GR394291 vs. TAIR peptide
Match: AT1G43890.1 (| Symbols: ATRAB18, ATRABC1, RAB18-1, RABC1, ATRAB-C1, RAB18 | RAB GTPASE HOMOLOG B18 | chr1:16646934-16648395 FORWARD LENGTH=212)

HSP 1 Score: 63.1586 bits (152), Expect = 7.998e-11
Identity = 29/47 (61.70%), Postives = 35/47 (74.47%), Query Frame = 3 
Query:    3 NVQQCFEELVLKTLDTPSLLAEGSKGVKNNIFKDKPPQSDASTGGCC 143
            NV+QCFEELVLK L+TPSL AEGS G K NIFK  P Q+ +++   C
Sbjct:  163 NVEQCFEELVLKILETPSLTAEGSSGGKKNIFKQNPAQTTSTSSSYC 209
[Close]
BLAST of GR394291 vs. TAIR peptide
Match: AT5G03530.1 (| Symbols: ATRAB ALPHA, ATRAB, ATRAB18B, ATRABC2A, RABC2A | RAB GTPase homolog C2A | chr5:885741-887061 REVERSE LENGTH=210)

HSP 1 Score: 61.2326 bits (147), Expect = 3.039e-10
Identity = 27/47 (57.45%), Postives = 31/47 (65.96%), Query Frame = 3 
Query:    3 NVQQCFEELVLKTLDTPSLLAEGSKGVKNNIFKDKPPQSDASTGGCC 143
            NV+QCFEEL LK ++ PSLL EGS  VK NI K KP     +  GCC
Sbjct:  163 NVEQCFEELALKIMEVPSLLEEGSSAVKRNILKQKPEHQTNTQSGCC 209
The following BLAST results are available for this feature:
BLAST of GR394291 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
C6TE10_SOYBN2.886e-1685.11Putative uncharacterized protein OS=Glycine max PE... [more]
C6T2M4_SOYBN3.769e-1685.11Putative uncharacterized protein OS=Glycine max PE... [more]
Q40207_LOTJA4.923e-1687.23RAB1Y (Fragment) OS=Lotus japonicus GN=rab1Y PE=2 ... [more]
A5ATB8_VITVI3.191e-1580.85Putative uncharacterized protein OS=Vitis vinifera... [more]
B9HES5_POPTR9.284e-1582.98Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9H489_POPTR1.213e-1482.98Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
C6SWE3_SOYBN1.584e-1478.72Putative uncharacterized protein OS=Glycine max PE... [more]
C6TJB7_SOYBN1.027e-1376.60Putative uncharacterized protein OS=Glycine max PE... [more]
B7FMN8_MEDTR1.027e-1385.11Putative uncharacterized protein OS=Medicago trunc... [more]
C5YB63_SORBI1.482e-1270.21Putative uncharacterized protein Sb06g034200 OS=So... [more]
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BLAST of GR394291 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 4
Match NameE-valueIdentityDescription
AT1G43890.37.998e-1161.70| Symbols: ATRAB18, ATRABC1, RAB18-1, RABC1, ATRAB... [more]
AT1G43890.27.998e-1161.70| Symbols: ATRAB18, ATRABC1, RAB18-1, RABC1, ATRAB... [more]
AT1G43890.17.998e-1161.70| Symbols: ATRAB18, ATRABC1, RAB18-1, RABC1, ATRAB... [more]
AT5G03530.13.039e-1057.45| Symbols: ATRAB ALPHA, ATRAB, ATRAB18B, ATRABC2A,... [more]
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Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GR394291 ID=GR394291; Name=GR394291; organism=Cicer arietinum; type=EST; length=476bp
TAAATGTGCAGCAATGCTTTGAAGAGCTTGTTTTGAAGACTCTTGATACA
CCTAGCCTCTTAGCTGAGGGCTCTAAGGGAGTAAAAAATAACATTTTTAA
GGACAAGCCACCTCAGTCTGATGCATCCACAGGTGGTTGTTGCTGATTTT
AAGAAGCTACTTCACTTGGAAGCTGCATTTTAAGAATCACGGCCTCCAAG
AGAAAGGCATTGCATCCATTTTCCTGGGTTTCTAACAAATTTCCTGGTTA
CTTTAGCCTTTTAGCATAAGTGGAGGTCATTTTTTATTTTTCAAGTTCCT
GTTTTGACTTGAATATGTAGATGTAATATAGTGATGATTGTTGTCTGCAA
TTTCTTGGGACTTGCGCTTAATTTCGTGTGAAGACGTGCAACTTTTTATT
TTAAATCACAATAGATGATCCAGATCAAATTGTATATAATAATAATGTCT
GAGCAACGATATGCTCCGAAAAAAAA
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