GR396121

EST Overview
NameGR396121
Unique NameGR396121
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length466
Libraries
Library NameType
LIBEST_024781 ICC4958 dehydration stressed root cDNA librarycdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Homology
BLAST of GR396121 vs. SwissProt
Match: STLP2_ARATH (SEC12-like protein 2 OS=Arabidopsis thaliana GN=STL2P PE=1 SV=4)

HSP 1 Score: 68.9366 bits (167), Expect = 1.206e-11
Identity = 35/74 (47.30%), Postives = 51/74 (68.92%), Query Frame = -1
Query:  248 QVQTMIKKAHLGIITALAFSPDSRALASVSLDSSAKVPVIEEK-ENGGLSLW--IAIFITLIAVAAYFLKIEGI 460
            Q   ++KKAHLG++TAL FSPDSR L SVS DS A++ +IE+K +  G+  W  + + + L  VA Y++K +GI
Sbjct:  318 QTIQVVKKAHLGLVTALTFSPDSRGLVSVSFDSRARLTMIEQKGDKPGVRWWLLVLLIVLLYVVAYYYMKAKGI 391          
BLAST of GR396121 vs. TrEMBL
Match: B9SJ58_RICCO (Prolactin regulatory element-binding protein, putative OS=Ricinus communis GN=RCOM_0843720 PE=4 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 9.104e-18
Identity = 42/71 (59.15%), Postives = 61/71 (85.92%), Query Frame = -1
Query:  248 QVQTMIKKAHLGIITALAFSPDSRALASVSLDSSAKVPVIEEKENGGLSLWIAIFITLIAVAAYFLKIEGI 460
            +VQ +++KAHLG++TALAFS DSRAL S SLDSSA+V ++++ ++GGLSLW+ IF+ L+A+ AYF+K EG+
Sbjct:  315 RVQKVVRKAHLGMVTALAFSHDSRALVSASLDSSARVTLVQDVKSGGLSLWLIIFVILLAMVAYFMKNEGL 385          
BLAST of GR396121 vs. TrEMBL
Match: D7T8S7_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_11.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00011745001 PE=4 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 4.519e-17
Identity = 42/71 (59.15%), Postives = 56/71 (78.87%), Query Frame = -1
Query:  248 QVQTMIKKAHLGIITALAFSPDSRALASVSLDSSAKVPVIEEKENGGLSLWIAIFITLIAVAAYFLKIEGI 460
            QVQ +++KAHLGI+T + FS DSRAL S S+DSSA+V VI+E +  G SLWI IFI ++A+AAY +K +GI
Sbjct:  230 QVQAVVRKAHLGIVTTMRFSQDSRALVSASMDSSARVTVIKEMKKNGFSLWIIIFIIIVAIAAYLMKTKGI 300          
BLAST of GR396121 vs. TrEMBL
Match: A5BL08_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_036876 PE=4 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 4.519e-17
Identity = 42/71 (59.15%), Postives = 56/71 (78.87%), Query Frame = -1
Query:  248 QVQTMIKKAHLGIITALAFSPDSRALASVSLDSSAKVPVIEEKENGGLSLWIAIFITLIAVAAYFLKIEGI 460
            QVQ +++KAHLGI+T + FS DSRAL S S+DSSA+V VI+E +  G SLWI IFI ++A+AAY +K +GI
Sbjct:  297 QVQAVVRKAHLGIVTTMRFSQDSRALVSASMDSSARVTVIKEMKKNGFSLWIIIFIIIVAIAAYLMKTKGI 367          
BLAST of GR396121 vs. TrEMBL
Match: D7LLR5_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_484065 PE=4 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 6.320e-11
Identity = 35/74 (47.30%), Postives = 51/74 (68.92%), Query Frame = -1
Query:  248 QVQTMIKKAHLGIITALAFSPDSRALASVSLDSSAKVPVIEEK-ENGGLSLWIAIF--ITLIAVAAYFLKIEGI 460
            Q   ++KKAHLG++TAL FSPDSR L SVS DS A++ +IE+K +  G+  W+ +   + L  VA Y++K +GI
Sbjct:  322 QTMQVVKKAHLGLVTALTFSPDSRCLVSVSFDSRARLTMIEQKGDKPGIRWWLLVLLVVLLYVVAYYYMKAKGI 395          
BLAST of GR396121 vs. TrEMBL
Match: Q2R1C4_ORYSJ (Os11g0610700 protein OS=Oryza sativa subsp. japonica GN=Os11g0610700 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 5.350e-10
Identity = 31/60 (51.67%), Postives = 43/60 (71.67%), Query Frame = -1
Query:  266 IKKAHLGIITALAFSPDSRALASVSLDSSAKVPVIEEKENGGLSLWIAIFITLIAVAAYF 445
            +KKAHLGIIT LAFS DSR L S S DS+A+V  I   ++ G+S+W  I + ++A+ AY+
Sbjct:  331 VKKAHLGIITTLAFSQDSRTLLSTSFDSTARVTSIGSPKSRGISIWTMILVIILAILAYY 390          
BLAST of GR396121 vs. TrEMBL
Match: B9G0A2_ORYSJ (Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_26867 PE=4 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 5.350e-10
Identity = 31/60 (51.67%), Postives = 43/60 (71.67%), Query Frame = -1
Query:  266 IKKAHLGIITALAFSPDSRALASVSLDSSAKVPVIEEKENGGLSLWIAIFITLIAVAAYF 445
            +KKAHLGIIT LAFS DSR L S S DS+A+V  I   ++ G+S+W  I + ++A+ AY+
Sbjct:  331 VKKAHLGIITTLAFSQDSRTLLSTSFDSTARVTSIGSPKSRGISIWTMILVIILAILAYY 390          
BLAST of GR396121 vs. TrEMBL
Match: B8AMX7_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_09981 PE=4 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 5.350e-10
Identity = 31/60 (51.67%), Postives = 43/60 (71.67%), Query Frame = -1
Query:  266 IKKAHLGIITALAFSPDSRALASVSLDSSAKVPVIEEKENGGLSLWIAIFITLIAVAAYF 445
            +KKAHLGIIT LAFS DSR L S S DS+A+V  I   ++ G+S+W  I + ++A+ AY+
Sbjct:  331 VKKAHLGIITTLAFSQDSRTLLSTSFDSTARVTSIGSPKSRGISIWTMILVIILAILAYY 390          
BLAST of GR396121 vs. TrEMBL
Match: Q9FGP3_ARATH (At5g50550 OS=Arabidopsis thaliana GN=At5g50550 PE=2 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 9.126e-10
Identity = 34/70 (48.57%), Postives = 48/70 (68.57%), Query Frame = -1
Query:  257 QVQTMIKKAHLGIITALAFSPDSRALASVSLDSSAKVPVIEEK-ENGGLSLWI-AIFITLIAVAAYFLKI 460
            Q   ++KKAHLG++TAL FSPDSR L SVS DS A++ VI++K E   + LW+ A+   L+ V  Y+L +
Sbjct:  308 QTNQIVKKAHLGLVTALTFSPDSRCLVSVSFDSRARLTVIKQKGEKRRVYLWVAALLFVLVYVVLYYLMV 377          
BLAST of GR396121 vs. TrEMBL
Match: C5Y6B7_SORBI (Putative uncharacterized protein Sb05g024260 OS=Sorghum bicolor GN=Sb05g024260 PE=4 SV=1)

HSP 1 Score: 64.3142 bits (155), Expect = 4.529e-9
Identity = 28/60 (46.67%), Postives = 41/60 (68.33%), Query Frame = -1
Query:  266 IKKAHLGIITALAFSPDSRALASVSLDSSAKVPVIEEKENGGLSLWIAIFITLIAVAAYF 445
            +KKAHLGI+T LAFS DSR L S S DSSA+V  +   ++ G S+W  + + ++A+  Y+
Sbjct:  329 VKKAHLGIVTTLAFSQDSRTLLSTSFDSSARVTSVGSPKSNGTSIWPMLLVIILAILVYY 388          
BLAST of GR396121 vs. TrEMBL
Match: C0PII4_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 63.1586 bits (152), Expect = 1.009e-8
Identity = 27/60 (45.00%), Postives = 40/60 (66.67%), Query Frame = -1
Query:  266 IKKAHLGIITALAFSPDSRALASVSLDSSAKVPVIEEKENGGLSLWIAIFITLIAVAAYF 445
            +KKAHLGI+T L FS DSR L S S DSSA+V  +   ++ G S+W  + + ++A+  Y+
Sbjct:  140 VKKAHLGIVTTLTFSQDSRTLLSTSFDSSARVTSVGSPKSNGTSIWPMLLVVILAILVYY 199          
BLAST of GR396121 vs. TAIR peptide
Match: AT2G01470.1 (| Symbols: STL2P, ATSEC12 | SEC12P-like 2 protein | chr2:212215-214435 REVERSE LENGTH=393)

HSP 1 Score: 68.9366 bits (167), Expect = 1.391e-12
Identity = 35/74 (47.30%), Postives = 51/74 (68.92%), Query Frame = -1
Query:  248 QVQTMIKKAHLGIITALAFSPDSRALASVSLDSSAKVPVIEEK-ENGGLSLW--IAIFITLIAVAAYFLKIEGI 460
            Q   ++KKAHLG++TAL FSPDSR L SVS DS A++ +IE+K +  G+  W  + + + L  VA Y++K +GI
Sbjct:  318 QTIQVVKKAHLGLVTALTFSPDSRGLVSVSFDSRARLTMIEQKGDKPGVRWWLLVLLIVLLYVVAYYYMKAKGI 391          
BLAST of GR396121 vs. TAIR peptide
Match: AT5G50650.1 (| Symbols: | Transducin/WD40 repeat-like superfamily protein | chr5:20610212-20612061 FORWARD LENGTH=383)

HSP 1 Score: 66.6254 bits (161), Expect = 6.905e-12
Identity = 34/70 (48.57%), Postives = 48/70 (68.57%), Query Frame = -1
Query:  257 QVQTMIKKAHLGIITALAFSPDSRALASVSLDSSAKVPVIEEK-ENGGLSLWI-AIFITLIAVAAYFLKI 460
            Q   ++KKAHLG++TAL FSPDSR L SVS DS A++ VI++K E   + LW+ A+   L+ V  Y+L +
Sbjct:  308 QTNQIVKKAHLGLVTALTFSPDSRCLVSVSFDSRARLTVIKQKGEKRRVYLWVAALLFVLVYVVLYYLMV 377          
BLAST of GR396121 vs. TAIR peptide
Match: AT5G50550.1 (| Symbols: | Transducin/WD40 repeat-like superfamily protein | chr5:20576870-20578719 FORWARD LENGTH=383)

HSP 1 Score: 66.6254 bits (161), Expect = 6.905e-12
Identity = 34/70 (48.57%), Postives = 48/70 (68.57%), Query Frame = -1
Query:  257 QVQTMIKKAHLGIITALAFSPDSRALASVSLDSSAKVPVIEEK-ENGGLSLWI-AIFITLIAVAAYFLKI 460
            Q   ++KKAHLG++TAL FSPDSR L SVS DS A++ VI++K E   + LW+ A+   L+ V  Y+L +
Sbjct:  308 QTNQIVKKAHLGLVTALTFSPDSRCLVSVSFDSRARLTVIKQKGEKRRVYLWVAALLFVLVYVVLYYLMV 377          
The following BLAST results are available for this feature:
BLAST of GR396121 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 1
Match NameE-valueIdentityDescription
STLP2_ARATH1.206e-1147.30SEC12-like protein 2 OS=Arabidopsis thaliana GN=ST... [more]
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BLAST of GR396121 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
B9SJ58_RICCO9.104e-1859.15Prolactin regulatory element-binding protein, puta... [more]
D7T8S7_VITVI4.519e-1759.15Whole genome shotgun sequence of line PN40024, sca... [more]
A5BL08_VITVI4.519e-1759.15Putative uncharacterized protein OS=Vitis vinifera... [more]
D7LLR5_ARALY6.320e-1147.30Putative uncharacterized protein OS=Arabidopsis ly... [more]
Q2R1C4_ORYSJ5.350e-1051.67Os11g0610700 protein OS=Oryza sativa subsp. japoni... [more]
B9G0A2_ORYSJ5.350e-1051.67Putative uncharacterized protein OS=Oryza sativa s... [more]
B8AMX7_ORYSI5.350e-1051.67Putative uncharacterized protein OS=Oryza sativa s... [more]
Q9FGP3_ARATH9.126e-1048.57At5g50550 OS=Arabidopsis thaliana GN=At5g50550 PE=... [more]
C5Y6B7_SORBI4.529e-946.67Putative uncharacterized protein Sb05g024260 OS=So... [more]
C0PII4_MAIZE1.009e-845.00Putative uncharacterized protein OS=Zea mays PE=2 ... [more]
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BLAST of GR396121 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 3
Match NameE-valueIdentityDescription
AT2G01470.11.391e-1247.30| Symbols: STL2P, ATSEC12 | SEC12P-like 2 protein ... [more]
AT5G50650.16.905e-1248.57| Symbols: | Transducin/WD40 repeat-like superfam... [more]
AT5G50550.16.905e-1248.57| Symbols: | Transducin/WD40 repeat-like superfam... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015943WD40/YVTN repeat-like-containing domainGENE3D2.130.10.10no descriptioncoord: 9..39
score: 0.0
IPR019781WD40 repeat, subgroupPFAMPF00400WD40coord: 8..39
score: 9.4

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GR396121 ID=GR396121; Name=GR396121; organism=Cicer arietinum; type=EST; length=466bp
GGACAAGCACATAAAAATATATAGATATCCATAACGATTTAACACCATAA
TTATACAATCTACAAAACATTAATGAGACAGAGGGTCATAACCAATGGAA
CATCCATTCACAATGACGAAAATATGAAGGAAAAAAAAAGTATATGTGAA
ACCCCAAAAATGGAAATGCTTCAGTAATGTTGATAAAGCTGCTTAGCAAG
CAGAAATATTCCTATATATTTGACTATTAATATTGAAACAACTTTTCAAT
TCCTTCAATCTTCAGGAAGTAAGCAGCTACTGCAATTAGGGTGATAAATA
TTGCAATCCACAAGCTCAGCCCTCCATTTTCCTTCTCTTCAATTACTGGT
ACCTTTGCACTTGAATCCAGGGATACAGAAGCCAATGCCCTTGAATCAGG
GGAAAATGCTAAAGCAGTTATTATGCCAAGGTGAGCCTTTTTTATCATTG
TCTGAACCTGCCCCGC
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: INTERPRO
TermDefinition
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR019781WD40 repeat, subgroup