GR397711

EST Overview
NameGR397711
Unique NameGR397711
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length520
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Homology
BLAST of GR397711 vs. TrEMBL
Match: B9S9V1_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0522450 PE=4 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 4.047e-11
Identity = 53/168 (31.55%), Postives = 77/168 (45.83%), Query Frame = 3
Query:    3 MKSLTPAQAAVMAAERRLQDDIWCGSQFCDKSDHEDDNSESAENLENKWKGVGXXXXXXXXXXXLVPTXXXXXXXXXXXLLVHSSSNPKFVDLTMDTPKSQCLNEHQTGSQQRSFGLESVSCSQSNYQXXXXXXXXXXXXXXXXXXXRTLH-SEELAMWECLTCTLLN 503
            M +L+P QAA MAAERRLQD+IWCGSQ  + S+  +++++ AE+L +  +                 +              H  SN   VDL+ D   S  + +  T  ++R++ L   + S S +                      +H SEELAMWEC  CTLLN
Sbjct:  185 MIALSPIQAAAMAAERRLQDEIWCGSQSAEVSEDGENSTDIAEDLVDARQTARSSRPDNGRKR----SRELSNTTDSQSFNGHLESN--IVDLSTDVSTSGSIRDRGTNPKKRTWNLYKSASSDSAF------INLIGGSSLGSIANHEIHSSEELAMWECAACTLLN 340          
BLAST of GR397711 vs. TrEMBL
Match: D7UAE5_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_15.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00014644001 PE=4 SV=1)

HSP 1 Score: 61.2326 bits (147), Expect = 4.188e-8
Identity = 49/167 (29.34%), Postives = 73/167 (43.71%), Query Frame = 3
Query:    3 MKSLTPAQAAVMAAERRLQDDIWCGSQFCDKSDHEDDNSESAENLENKWKGVGXXXXXXXXXXXLVPTXXXXXXXXXXXLLVHSSSNPKFVDLTMDTPKSQCLNEHQTGSQQRSFGLESVSCSQSNYQXXXXXXXXXXXXXXXXXXXRTLHSEELAMWECLTCTLLN 503
            M +L+P QAA MAAERRLQDDIWCGSQ C+ S+  + +S+ ++   ++ +  G                           +    S    +DL + + K      H+TGS   SF ++   C+ ++                      T ++EE  MWEC  CTLLN
Sbjct:  185 MDALSPIQAAAMAAERRLQDDIWCGSQSCEASEGGESSSDLSDRHVHREQSAG---------------------------MSSHGSGRGALDLDVTSRK----RSHETGS---SF-VDLSKCASAS--------------GSVLGHNATHNTEESIMWECGICTLLN 302          
BLAST of GR397711 vs. TAIR peptide
Match: AT1G55915.1 (| Symbols: | zinc ion binding | chr1:20907663-20909429 FORWARD LENGTH=404)

HSP 1 Score: 55.8398 bits (133), Expect = 1.524e-8
Identity = 46/167 (27.54%), Postives = 64/167 (38.32%), Query Frame = 3
Query:    3 MKSLTPAQAAVMAAERRLQDDIWCGSQFCDKSDHEDDNSESAENLENKWKGVGXXXXXXXXXXXLVPTXXXXXXXXXXXLLVHSSSNPKFVDLTMDTPKSQCLNEHQTGSQQRSFGLESVSCSQSNYQXXXXXXXXXXXXXXXXXXXRTLHSEELAMWECLTCTLLN 503
            M  L+P QAA MAAERRL DDIWCGSQ  D  + E+++S++ +      + V             V                        +DLT ++ + +C        + RS G +  SC++                            EE  MWEC  CTLLN
Sbjct:  189 MSDLSPIQAAAMAAERRLLDDIWCGSQSTDALEDEENDSDTYK------EPVSIRETCTSVNGKSVKRCNSWSNAHSCPPSSSHQQGSDVIDLTEESFEIRCT------KRNRSPGDQGPSCAK---DVPNAGVMKSSIPLPSTSYNANQSREESTMWECAECTLLN 340          
The following BLAST results are available for this feature:
BLAST of GR397711 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 2
Match NameE-valueIdentityDescription
B9S9V1_RICCO4.047e-1131.55Putative uncharacterized protein OS=Ricinus commun... [more]
D7UAE5_VITVI4.188e-829.34Whole genome shotgun sequence of line PN40024, sca... [more]
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BLAST of GR397711 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT1G55915.11.524e-827.54| Symbols: | zinc ion binding | chr1:20907663-209... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 54..64
score: NAcoord: 69..79
score: NAcoord: 129..147
score

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GR397711 ID=GR397711; Name=GR397711; organism=Cicer arietinum; type=EST; length=520bp
TAATGAAGTCACTTACTCCAGCACAAGCAGCTGTGATGGCTGCAGAAAGG
AGATTACAGGATGACATATGGTGTGGTTCTCAATTTTGTGATAAATCAGA
TCATGAAGATGATAACAGTGAATCTGCTGAAAACCTTGAAAATAAGTGGA
AAGGTGTGGGAAGCTCGAGACCATCAGACAGTTCTACTCTATCTTTGGTT
CCAACATCTCGAAAAAGAAGTCGTGATAAGGATTCAAGTTTACTAGTTCA
CTCATCTAGTAACCCTAAATTTGTTGATTTGACAATGGATACACCAAAAA
GTCAATGTCTCAATGAACATCAGACTGGGTCTCAACAAAGAAGTTTTGGA
TTAGAAAGTGTTTCATGTTCTCAATCAAATTATCAAGCAGGATCTAGTTC
TGCAAATTTATCATGTTCATCTGGGTCACTATCTGTTGTTAATAGAACAC
TTCATTCTGAAGAACTTGCAATGTGGGAGTGTCTCACATGCACTTTGTTA
AATAAAGTAAGCATTCAACC
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