GR397711
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GR397711 vs. TrEMBL
Match: B9S9V1_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0522450 PE=4 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 4.047e-11 Identity = 53/168 (31.55%), Postives = 77/168 (45.83%), Query Frame = 3 Query: 3 MKSLTPAQAAVMAAERRLQDDIWCGSQFCDKSDHEDDNSESAENLENKWKGVGXXXXXXXXXXXLVPTXXXXXXXXXXXLLVHSSSNPKFVDLTMDTPKSQCLNEHQTGSQQRSFGLESVSCSQSNYQXXXXXXXXXXXXXXXXXXXRTLH-SEELAMWECLTCTLLN 503 M +L+P QAA MAAERRLQD+IWCGSQ + S+ +++++ AE+L + + + H SN VDL+ D S + + T ++R++ L + S S + +H SEELAMWEC CTLLN Sbjct: 185 MIALSPIQAAAMAAERRLQDEIWCGSQSAEVSEDGENSTDIAEDLVDARQTARSSRPDNGRKR----SRELSNTTDSQSFNGHLESN--IVDLSTDVSTSGSIRDRGTNPKKRTWNLYKSASSDSAF------INLIGGSSLGSIANHEIHSSEELAMWECAACTLLN 340
BLAST of GR397711 vs. TrEMBL
Match: D7UAE5_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_15.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00014644001 PE=4 SV=1) HSP 1 Score: 61.2326 bits (147), Expect = 4.188e-8 Identity = 49/167 (29.34%), Postives = 73/167 (43.71%), Query Frame = 3 Query: 3 MKSLTPAQAAVMAAERRLQDDIWCGSQFCDKSDHEDDNSESAENLENKWKGVGXXXXXXXXXXXLVPTXXXXXXXXXXXLLVHSSSNPKFVDLTMDTPKSQCLNEHQTGSQQRSFGLESVSCSQSNYQXXXXXXXXXXXXXXXXXXXRTLHSEELAMWECLTCTLLN 503 M +L+P QAA MAAERRLQDDIWCGSQ C+ S+ + +S+ ++ ++ + G + S +DL + + K H+TGS SF ++ C+ ++ T ++EE MWEC CTLLN Sbjct: 185 MDALSPIQAAAMAAERRLQDDIWCGSQSCEASEGGESSSDLSDRHVHREQSAG---------------------------MSSHGSGRGALDLDVTSRK----RSHETGS---SF-VDLSKCASAS--------------GSVLGHNATHNTEESIMWECGICTLLN 302
BLAST of GR397711 vs. TAIR peptide
Match: AT1G55915.1 (| Symbols: | zinc ion binding | chr1:20907663-20909429 FORWARD LENGTH=404) HSP 1 Score: 55.8398 bits (133), Expect = 1.524e-8 Identity = 46/167 (27.54%), Postives = 64/167 (38.32%), Query Frame = 3 Query: 3 MKSLTPAQAAVMAAERRLQDDIWCGSQFCDKSDHEDDNSESAENLENKWKGVGXXXXXXXXXXXLVPTXXXXXXXXXXXLLVHSSSNPKFVDLTMDTPKSQCLNEHQTGSQQRSFGLESVSCSQSNYQXXXXXXXXXXXXXXXXXXXRTLHSEELAMWECLTCTLLN 503 M L+P QAA MAAERRL DDIWCGSQ D + E+++S++ + + V V +DLT ++ + +C + RS G + SC++ EE MWEC CTLLN Sbjct: 189 MSDLSPIQAAAMAAERRLLDDIWCGSQSTDALEDEENDSDTYK------EPVSIRETCTSVNGKSVKRCNSWSNAHSCPPSSSHQQGSDVIDLTEESFEIRCT------KRNRSPGDQGPSCAK---DVPNAGVMKSSIPLPSTSYNANQSREESTMWECAECTLLN 340 The following BLAST results are available for this feature:
BLAST of GR397711 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl) Total hits: 2
BLAST of GR397711 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide) Total hits: 1
InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GR397711 ID=GR397711; Name=GR397711; organism=Cicer arietinum; type=EST; length=520bpback to top |